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datasets available to search
ShareScore release 0.9.0
Dataset results
342 results for “Proxies”
Data from: A whole methylome study of ethanol exposure in brain and blood: an exploration of the utility of peripheral blood as proxy tissue for brain in alcohol methylation studies
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Data from: Reduction of leaf area and symptom severity as proxies of disease-induced plant mortality: the example of the Cauliflower mosaic virus infecting two Brassicaceae hosts
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Data from: Evidence that metallic proxies are unsuitable for assessing the mechanics of microwear formation and a new theory of the meaning of microwear
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Data from: Multi-modal signal evolution in birds: re-examining a standard proxy for sexual selection
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What is the best fitness measure in wild populations? A case study on the power of short-term fitness proxies to predict reproductive value
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Data from: On formation-based sampling proxies and why they should not be used to correct the fossil record
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Quantifying shell outline variability in extant and fossil Laqueus (Brachiopoda: Terebratulida): are outlines good proxies for long-looped brachidial morphology and can they help us characterize species?
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Evaluating the mouse neural precursor line, SN4741, as a suitable proxy for midbrain dopaminergic neurons [scRNA-seq]
GEO Series GSE225076. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Evaluating the mouse neural precursor line, SN4741, as a suitable proxy for midbrain dopaminergic neurons [Bulk RNA-seq]
GEO Series GSE225071. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
RB920160The gas-phase oxidation of mixed organic films at the air-water interface testing for cloud climate effects in more representative proxies
<p>Binned neutron reflectivity data for titled experiment.</p>
Basaluminite in natural and engineered systems: Insights on As retention and its use as proxy for the acidification of high-alpine catchments
<p>Raw Data containing the data used in the MSc thesis Basaluminite in natural and engineered systems: Insights on As retention and its use as proxy for the acidification of high-alpine catchments</p>
Data from: Internet blogs, polar bears, and climate-change denial by proxy
Increasing surface temperatures, Arctic sea-ice loss, and other evidence of anthropogenic global warming (AGW) are acknowledged by every major scientific organization in the world. However, there is a wide gap between this broad scientific consensus and public opinion. Internet blogs have strongly contributed to this consensus gap by fomenting misunderstandings of AGW causes and consequences. Polar bears (Ursus maritimus) have become a "poster species" for AGW, making them a target of those denying AGW evidence. Here, focusing on Arctic sea ice and polar bears, we show that blogs that deny or downplay AGW disregard the overwhelming scientific evidence of Arctic sea-ice loss and polar bear vulnerability. By denying the impacts of AGW on polar bears, bloggers aim to cast doubt on other established ecological consequences of AGW, aggravating the consensus gap. To counter misinformation and reduce this gap, scientists should directly engage the public in the media and blogosphere.
Identification and single-base gene-editing functional validation of a cis-EPO variant as a genetic proxy for EPO-increasing therapies.
<p>Summary statistics for the genome-wide association study meta-analysis of circulating EPO in 6,127 individuals of European and African American descent. Effect sizes are aligned to allele 1. </p> <p>Description of column names:<br> # Marker - this is the marker name; chromosome:position<br> # Allele1 - the first allele for this marker in the first file where it occurs<br> # Allele2 - the second allele for this marker in the first file where it occurs<br> # Freq1 - weighted average of frequency for allele 1 across all studies<br> # FreqSE - corresponding standard error for allele frequency estimate<br> # MinFreq - minimum frequency for allele 1 across all studies<br> # MaxFreq - maximum frequency for allele 1 across all studies<br> # Effect - overall estimated effect size for allele1<br> # StdErr - overall standard error for effect size estimate<br> # P-value - meta-analysis p-value<br> # Direction - summary of effect direction for each study, with one '+' or '-' per study. Order of the studies is InCHIANTI, BLSA, HealthABC Europeans, PREVEND, HealthABC African Americans<br> # HetISq - I^2 statistic which measures heterogeneity on scale of 0-100%<br> # HetChiSq - chi-squared statistic in simple test of heterogeneity<br> # df - degrees of freedom for heterogeneity statistic<br> # HetPVal - P-value for heterogeneity statistic<br> # TotalSampleSize - overall sample size for that variant in the meta-analysis</p> <p> </p>
Identification and single-base gene-editing functional validation of a cis-EPO variant as a genetic proxy for EPO-increasing therapies.
<p>Raw fast-qc files for RNA sequencing analysis of whole <em>EPO</em> gene knock-outs generated through CRISPR-Cas9 gene-editing in HEK-293 cells compared to wild-type controls. </p> <p>Wild-type cell-lines (Empty 1 - Empty 4) were transfected with empty CRISPR-Cas9 constructs to ensure cells were treated under the same experimental conditions. Whole EPO gene knock-outs were generated using a double gRNA approach with CRISPR-Cas9 gene-targeting. Two whole EPO gene knock-out cell-lines were generated (KO-A and KO-B).</p> <p>Library preparation was performed using the TruSeq DNA HT Library Preparation Kit using the 3’ poly-A tail primer Oligo(dT) from Illumina (Illumina, California, USA). RNA Sequencing was performed using the Illumina HiSeq 2500 high-throughput sequencing system (Illumina, California, USA). We resulted in 75 bp paired-end sequences.</p> <p> </p>
Fig. 4 in Testate Amoebae as Proxy for Water Level Changes in a Brackish Tidal Marsh
Fig. 4. Photographs of unidentified species, called here Pseudohyalosphenia sp. 1.
Data from: Ecoacoustic indices as proxies for biodiversity on temperate reefs
Diversity measurement techniques can present logistical and financial obstacles to conservation efforts. Ecoacoustics has recently emerged as a promising solution to these issues, providing a mechanism for measuring diversity using acoustic indices, which have proven to be beneficial in terrestrial habitats. This study investigates the application of acoustic measures as a tool for quick and effective marine diversity monitoring via direct, in situ comparison of ecoacoustics indices with species assemblage diversity measures from temperate rocky reefs. Acoustic recordings and visual surveys of reef fish abundance were collected at nine sites in north-eastern New Zealand. Three ecoacoustic indices originally developed for terrestrial use were then compared to three species assemblage diversity measures and compared using Pearson correlations. Additionally, four criteria for successful ecoacoustic indices were developed and tested as a means of standardizing future evaluation and use of acoustic indices: (i) positive correlations between species diversity and ecoacoustic indices in relevant frequency ranges, (ii) robustness to changes in spectral resolution, (iii) robustness to the presence of natural noise interference (i.e. wind) and (iv) robustness to the presence of anthropogenic noise. Acoustic Complexity Index (ACI) was significantly correlated with Pielou's Evenness (J′) and Shannon's index (H′). Neither Acoustic Richness (AR) nor ACI was impacted by changes in spectral resolution, but values of the Acoustic Entropy Index (H) increased significantly between fast Fourier transformation (FFT) sizes 512 and 1024. H was consistently positively correlated with both H′ and estimated number of species (S) above a spectral resolution of c. 140·6 Hz (FFT size 1024). Wind did not affect any of the acoustic indices. As anthropogenic noise was included in these investigations, both ACI and H were considered robust to its presence. While AR failed to meet all four criteria for a successful ecoacoustic indices, both ACI and H appeared to be appropriate for use on temperate reefs. In a time of accelerated global diversity loss, these two ecoacoustic indices show strong potential for use as efficient, non-invasive marine diversity measures.
Figure 3 from: Seibt J, Vestergaard C (2018) Fair Proxy Communication: Using Social Robots to Modify the Mechanisms of Implicit Social Cognition. Research Ideas and Outcomes 4: e31827. https://doi.org/10.3897/rio.4.e31827
Figure 3 The Telenoid robot created by Hiroshi Ishiguro, ATR Hiroshi Ishiguro Lab, Japan.
Southern High Latitude Temperature Proxies from the Late Eocene and Early Oligocene
<p>Dataset of proxy records utilized in Comparison of Southern High Latitude Temperature Proxies to Model Outputs from the Eocene-Oligocene Transition by Tibbett et al., 2022</p>
Database on biomass trade, production, demand, biodiversity proxies - CLEVER (D3.1)
<p>The database on biomass trade, production, demand, biodiversity proxies will be used in CLEVER future work to quantify the causal impacts of non-food biomass trade on biodiversity threat proxies through ex-post econometric assessments. More specifically, these data will allow us to estimate trader stickiness and trade substitution elasticities for selected products, evaluate biodiversity threats related to trade of non-food biomass from land, and assess biodiversity risks related to trade of biomass from sea.</p> <p>This database will be used as input to the empirical studies on how policy instruments and governance regimes moderate the impacts of land use and land cover change (LULCC), thus identifying leverage points for more effective biodiversity governance. To provide empirical estimates of critical parameters determining potential effects of trade, we use data from both various trading partners and several other publicly available data sources. Data were collected with the focus on the case studies proposed in CLEVER both in terms of countries and supply chains/sectors.</p>
French Linguistic and Metric Validations of Parent-proxy QOL Chronic Cough Specific Questionnaire (PC-QOL)
ClinicalTrials.gov study NCT01865422. IPD Sharing: Not stated. Countries: 1. Publications: 0.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.