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Fig. 2 in A new blood parasite of leaf warblers: molecular characterization, phylogenetic relationships, description and identification of vectors
Fig. 2 Bayesian pcygogenetic inference of cytb gene gineages (479 bp) of 35 Haemoproteus spp. Tce tree is rooted witc Leucocytozoon sp. (gineage gSISKIN2). Cgades A and B indicate species of tce subgenus Parahaemoproteus (a) and caemoproteids witc page-staining cytopgasm of gametocytes (b). MagAvi gineage codes are provided, foggowed by parasite species names and GenBank accession numbers. Nodag support vagues indicate Bayesian posterior probabigities. New species is given in bogd
Fig. 1 in A new blood parasite of leaf warblers: molecular characterization, phylogenetic relationships, description and identification of vectors
Fig. 1 Gametocytes of two species of caemoproteids described from geaf warbges, Pcyggoscopidae. Haemoproteus homopalloris n. sp. (a-l) and Haemoproteus palloris (m-p). Young gametocytes (a, b), macrogametocytes (c-g, m, n) and microgametocytes (h-l, o, p). Long arrows: gametocyte nucgei; scort arrows: vacuoge-gike spaces in macrogametocytes; arrowceads: pigment granuges. Giemsa-stained tcin bgood figms. Scale-bar: a-p, 10 μm
Fig. 4 in A new blood parasite of leaf warblers: molecular characterization, phylogenetic relationships, description and identification of vectors
Fig. 4 Gametocytes of two species of caemoproteids, wcicc cave been reported in tce wood warbger Phylloscopus sibilatrix. Macrogametocytes (a-c, e-g) and microgametocytes (d, h) of Haemoproteus majoris (a-d) and H. belopolskyi (e-h). Note tcat tce intensity of staining of tce cytopgasm is different in macro- and microgametocytes. Long arrows: gametocyte nucgei; scort arrows: vacuoge-gike spaces in macrogametocytes; arrowceads: pigment granuges. Giemsa-stained tcin bgood figms. Scale-bar: a-h, 10 μm
Fig. 3 in A new blood parasite of leaf warblers: molecular characterization, phylogenetic relationships, description and identification of vectors
Fig. 3 Haemoproteus spp. witc page staining of macrogametocyte cytopgasm. Haemoproteus concavocentralis (a-d), H. minutus (e-h), H. pallidus (i- l), H. pallidulus (m-p) and H. vacuolatus (q-t). Macrogametocytes (a, b, e, f, i, j, m, n, q, r), microgametocytes (c, d, g, h, k, l, o, p, s, t). Note tce foggowing vaguabge diagnostic features of tce parasites: presence of a space between tce nucgeus of tce infected erytcrocyte and tce growing gametocyte in H. concavocentralis (a); cgeargy irregugar outgine of mature gametocytes, wcicc do not toucc tce poges of infected erytcrocytes in H. minutus (e-h); gametocyte wcicc are cgosegy appressed to tce nucgeus of erytcrocyte but do not toucc tce envegope of erytcrocyte agong tceir entire margin in H. pallidus (j, l); smagg pigment granuges in mature gametocytes of H. pallidulus (m-p); presence of one prominent vacuoge in tce cytopgasm of eacc advanced macrogametocyte in H. vacuolatus (q-t). Agg tcese features are not ccaracteristics of H. homopalloris n. sp. (see Fig. 1). Long simpge arrows: gametocyte nucgei; scort simpge arrows: vacuoge-gike spaces in macrogametocytes; arrowceads: pigment granuges; gong simpge wide arrows: space present between tce parasite and an infected erytcrocyte nucgeus (a, d) and space between tce parasite and tce envegope of infected erytcrocyte (j, l). Giemsa-stained tcin bgood figms. Scale-bar: a-t, 10 μm
Deliverable 2.4: Biodiversity impact database including characterization factors and documentation ready for use in Module C
<p><span>We quantify the impacts of agriculture and livestock, on biodiversity (including intensity of use), and translate the results of these modeling efforts which indicate current patterns of biodiversity indicators in both South America and Africa (as well as potential biodiversity loss) to data inputs to be further used in CLEVER. </span></p>
Comparability and Reproducibility in HPC Applications' Energy Consumption Characterization
<p>The computational power of HPC systems continues to grow, and improving their energy efficiency is a critical issue for the field in the face of climate change and energy crises. One major aspect of energy optimization lies in the applications run on the systems themselves. In this work, we are looking into comparing energy consumption between different systems using a characterization process based on the recent energy characterization paper as a reference and starting point for other data centers to assess their application’s energy patterns. We demonstrated that we could use the methods from the starting paper, replicate the findings, and extend the work to more applications and more systems. Our work acts as a proof of concept for a repository of HPC applications’ energy patterns in our future work.<br><br>This is the collection of jobscripts, data, and python scripts used in the paper.</p>
Fig. 3 in Molecular Characterization of Two Myxosporean Species, Henneguya namae Haldar et al. 1983 and Myxobolus sophorae Jayasri, 1982 (Myxosporea: Myxobolidae)
Fig. 3. Phylogenetic relationship of H. namae and M. sophorae based on the 18S gene sequences. Numbers at nodes indicates ML bootstrap values (1000 replications) and posterior probabilities (BI) respectively. Unsupported nodes by BI are marked with a hyphen. The scale bar indicates the number of substitution per site. Newly generated sequences in this study shown as bold. GenBank accession numbers are listed before the species names.
Atmospheric aerosol chemical characterization and organic aerosol source apportionment by HR-TOF-AMS in the Po Valley during RHAPS (2021)
<p><span>Time series of non-refractory submicrometric aerosol (PM1) chemical components (sulfate, nitrate, ammonium, chloride, and organic aerosol, OA) from RHAPS campaigns (winter and summer 2021) at Bologna (BO) and San Pietro Capofiume (SPC), Po Valley, Italy.<br></span></p> <p><span>Time series and profiles of OA source factors derived from PMF.</span></p>
Data from: Island-wide characterization of agricultural production challenges the demographic collapse hypothesis for Rapa Nui (Easter Island)
<p>Communities in resource-poor areas face health, food production, sustainability, and overall survival challenges. Consequently, they are commonly featured in global debates surrounding societal collapse. Rapa Nui (Easter Island) is often used as an example of how over-exploitation of limited resources resulted in a catastrophic population collapse. A vital component of this narrative is that the rapid rise and fall of pre-contact Rapanui population growth rates was driven by the construction and overexploitation of once extensive rock gardens. However, the extent of island-wide rock gardening, while key for understanding food systems and demography, must be better understood. Here, we use shortwave infrared (SWIR) satellite imagery and machine learning to generate an islandwide estimate of rock gardening and re-evaluate prior population size models for Rapa Nui. We show that the extent of this agricultural infrastructure is substantially less than previously claimed and likely could not have supported the large population sizes that have been assumed.</p>
Fig. 2 in Genetic characterization and description of Leishmania (Leishmania) ellisi sp. nov.: a new human-infecting species from the USA
Fig. 2 Phylogenetic tree demonstrating the relative position of Leishmania sp. strain 218-L139 based on a concatenated sequence comprising several nuclear loci. Phylogenetic tree demonstrating the relative position of Leishmania strain 218-L139 (brown star) based on alignment of a concatenated sequence comprising the 18S rDNA, 28S rDNA, CKIIα, GAPDH, and RPOIILS nuclear sequences. The alignment contains 6577 positions from 33 taxa. The tree was built using maximum likelihood (1000 bootstrap replicates) and Bayesian
Fig. 1 in Genetic characterization and description of Leishmania (Leishmania) ellisi sp. nov.: a new human-infecting species from the USA
Fig. 1 Morphology of Leishmania strain 218-L139 promastigotes and amastigotes. Cultured Leishmania strain 218-L139 promastigotes as observed under DIC microscopy following growth in complete RPMI culture medium without gentamicin (A). Giemsa-stained touch preparation made from a cutaneous lesion, showing Leishmania strain 218-L139 amastigotes inside a mononuclear phagocyte in addition to free amastigotes (B). Giemsastained smear of cultured promastigotes of Leishmania strain 218-L139 grown in gentamicin-free complete RPMI medium (C)
Fig. 3 in Genetic characterization and description of Leishmania (Leishmania) ellisi sp. nov.: a new human-infecting species from the USA
Fig. 3 Phylogenetic tree demonstrating the relative position of Leishmania strain 218-L139 based on partial maxicircle genome sequences. Phylogenetic tree demonstrating the relative position of Leishmania strain 218-L139 (brown star) based on alignment of partial maxicircle genome sequences. The alignment contains 9471 positions from 67 taxa. The tree was built using maximum likelihood (1000 bootstrap replicates) and the TVM + F + I + G4 model, and Bayesian inference using the GTR + I + G model where the proportion of invariable sites was set to 0.1. Posterior probability values and bootstrap support are reported for each node (pp/bs). The tree was rooted with the Strigomonas/Blechomonas/Herpetomonas clade. The relative position of each Leishmania subgenus is shown to the right of the corresponding clades (Leishmania, Sauroleishmania, Viannia, Mundinia). The scale bar represents the number of substitutions per site
Fig. 1 in Identification and characterization of Rhipicephalus (Boophilus) microplus candidate protective antigens for the control of cattle tick infestations
Fig. 1 Antibody response in vaccinated cattle. Bovine serum antibody titers to recombinant antigens were determined by ELISA in cattle vaccinated with ubiquitin, subolesin, Bm86, and adjuvant/ saline control. Antibody titers in immunized cattle were expressed as the OD450 nm value for the highest serum dilution (1:1,000) and compared between vaccinated and control cattle using an ANOVA test (*P<0.05). The time of vaccination shots (arrows) and tick infestation are indicated
Fig. 2 in Characterization Of Six Lobster Species Of The Genus Panulirus (Decapoda, Palinuridae) From Aceh Waters, Indonesia Based On Morphometric Analysis
Fig. 2. Map of the research location, where the left is Aceh Jaya Regency and the right is Simeulue Regency (red markers indicate location of the data collection).
Fig. 3 in Characterization Of Six Lobster Species Of The Genus Panulirus (Decapoda, Palinuridae) From Aceh Waters, Indonesia Based On Morphometric Analysis
Fig. 3. Schematic of the morphometric measurement of the genus Panulirus. Measurement designations are given in table 1.
Fig. 1 in Characterization Of Six Lobster Species Of The Genus Panulirus (Decapoda, Palinuridae) From Aceh Waters, Indonesia Based On Morphometric Analysis
Fig. 1. Sample of the genus Panulirus: A — Panulirus penicillatus (local name: Lobster Batu), B — Panulirus homarus (L. Pasir), C — Panulirus longipes (L. Batik), D — Panulirus ornatus (L. Mutiara), E — Panulirus versicolor (L. Bambu), F —Panulirus polyphagus (L. Pakistan). Scale bar 2 cm.
Figure 2 in Isolation and characterization of bacteria associated with silkworm gut under antibiotic-treated larval feeding
Figure 2. Phylogenetic relationship and identification of bacterial strains isolated in this study based on 16S rRNA gene sequence through Neighbor Joining method using 1000 bootstrap replicates.
Figure 2 in Obtainment and characterization of digestive aspartic proteases from the fish Caranx hippos (Linnaeus, 1766)
Figure 2. pH and temperature effect on EE acidic proteases. (A) Optimal temperature; (B) Thermal stability; (C) Optimal pH; (D) pH stability.
Figure 2 in Phytochemical characterization, and antioxidant and antibacterial activities of the hydroethanolic extract of Anadenanthera peregrina stem bark
Figure 2. HPLC-PDA chromatographic profiles (λ = 254 nm) of: (A) sample extract; (B) gallic acid standard; (C) catechin standard; and (D) epicatechin standard, followed by UV spectra (190-400 nm).
Figure 1 in Phytochemical characterization, and antioxidant and antibacterial activities of the hydroethanolic extract of Anadenanthera peregrina stem bark
Figure 1. Erythrocyte hemolysis in a 5% red blood cell suspension by the hydroethanolic extract of A. peregrina stem bark. (A) 5% suspension of red blood cells; (B) hemolysis after 1 min of reaction; (C) advanced hemolysis after 5 min; and (D) completely hemolyzed red blood cells within 10 min of reaction. Bars: At (A) 1.000×; (B) 500×; (C) 650×; and (D) 1.800×.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.