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139
datasets available to search
ShareScore release 0.9.0
Dataset results
139 results for “CLIP-seq”
RNA helicase DDX10 is Required for Pluripotency of Stem Cells by Regulating 18S rRNA Processing (CLIP-Seq)
GEO Series GSE232093. Mus musculus. 2 samples. Type: Other.
Co-transcriptional genome surveillance by HUSH is coupled to termination (CLIP-Seq)
GEO Series GSE208751. Mus musculus. 2 samples. Type: Other.
Cytoplasmic Location of Translation Controls Protein Output [CLIP-seq]
GEO Series GSE215769. Homo sapiens. 6 samples. Type: Other.
CLIP-seq analysis of KSHV ORF57-associated RNAs
GEO Series GSE179726. Homo sapiens. 3 samples. Type: Other.
Functional screen for mediators of onco-mRNA translation specificity [CLIP-seq]
GEO Series GSE255703. Homo sapiens. 2 samples. Type: Other.
Combinatorial mRNA Regulation by miRNAs and Pumilio proteins [CLIP-seq]
GEO Series GSE110518. Homo sapiens. 21 samples. Type: Expression profiling by high throughput sequencing.
CELF2 CLIP-seq in human JSL1 T cells
GEO Series GSE71264. Homo sapiens. 18 samples. Type: Other.
The binding specificity and regulatory effect of WT and redesigned Puf2p [CLIP-Seq]
GEO Series GSE73273. Saccharomyces cerevisiae. 12 samples. Type: Other.
Systematic Mapping of ADAR1 Binding Reveals its Regulatory Roles in Multiple RNA Processing Pathways [CLIP-seq]
GEO Series GSE55361. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Transcription factors interact with RNA to regulate genes (CLIP-Seq)
GEO Series GSE232179. Homo sapiens. 2 samples. Type: Other.
Integrative analysis of mRNA stability regulation uncovers a metastasis-suppressive program in breast cancer [CLIP-seq]
GEO Series GSE301429. Homo sapiens. 2 samples. Type: Other.
Transcriptome analysis of gene expression and single-nucleotide-resolution m6A sites in normal and mettl3 cKO testis samples (CLIP-Seq)
GEO Series GSE99772. Mus musculus. 2 samples. Type: Other.
Divergent roles of ALS-linked proteins FUS/TLS and TDP-43 intersect in processing long pre-mRNAs (CLIP-Seq)
GEO Series GSE40651. Homo sapiens; Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing.
sCLIP – An integrated platform to study RNA-protein interactome(s) in biomedical research: identification of CSTF2tau in alternative processing of small nuclear RNAs [CLIP-Seq]
GEO Series GSE92995. Homo sapiens. 3 samples. Type: Other.
Regulation of alternative polyadenylation by the C2H2-zinc finger protein Sp1 [CLIP-seq]
GEO Series GSE165739. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing.
Depletion of mRNA cap-binding protein eIF4E1 drives bradyzoite formation in Toxoplasma gondii [CLIP-seq]
GEO Series GSE243203. Toxoplasma gondii. 12 samples. Type: Other.
GAPDH Controls Transcript Stability, Protein Translation and Drives Proliferation in Acute Myeloid Leukemia [CLIP-seq]
GEO Series GSE270168. Homo sapiens. 6 samples. Type: Other.
Subcellular refinement of RNA binding protein target interactions with colocalization CLIP [CLIP-seq]
GEO Series GSE245209. Homo sapiens. 58 samples. Type: Other.
CLIP-seq analysis of WT and Gag chimera HIV-1 virions 2
GEO Series GSE281423. Homo sapiens. 37 samples. Type: Other.
Enhanced CLIP-seq analysis of PTBP1 and IGF2BP2 binding targets
GEO Series GSE192792. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing; Other.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.