Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
815
datasets available to search
ShareScore release 0.9.0
Dataset results
815 results for “CUT&RUN”
Altered DNA methylation underlies monocyte dysregulation and immune exhaustion memory in sepsis [CUT&RUN]
GEO Series GSE253201. Mus musculus. 18 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Analysis of nascent transcription in ES cells mutant for specific TFIID subunits [CUT&Run]
GEO Series GSE245194. Mus musculus. 36 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Benchmarking Peak Calling Methods for CUT&RUN
GEO Series GSE282809. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
PSME3 Regulates Migration and Differentiation of Myoblasts [CUT&Run]
GEO Series GSE295256. Mus musculus. 21 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Definition of a Small Core Transcriptional Circuit Regulated by AML1-ETO [ChIP-seq, Cut&Run]
GEO Series GSE153279. Homo sapiens. 9 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
H3.3K122A results in a neomorphic phenotype in mouse embryonic stem cells (CUT&RUN)
GEO Series GSE272577. Mus musculus. 28 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Enhancer Poising Enables Pathogenic Gene Activation by Noncoding Variants [CUT&RUN]
GEO Series GSE299697. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A Genome-Wide CRISPR Screen Identifies BRD4 as a Regulator of Cardiomyocyte Differentiation [CUT&RUN]
GEO Series GSE253329. Homo sapiens. 10 samples. Type: Other.
Definition of a Small Core Transcriptional Circuit Regulated by AML1-ETO [ChIP-seq and CUT&RUN]
GEO Series GSE160242. Homo sapiens. 31 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Mediator kinase inhibition drives myometrial stem cell differentiation and the uterine fibroid phenotype through super-enhancer reprogramming [CUT&RUN]
GEO Series GSE276458. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Estrogen Receptor alpha CUT&RUN analysis of estrogen receptor positive breast cancer cell lines MCF7 and UCD12 with 1h hormone E2 treatment
GEO Series GSE210007. Homo sapiens. 40 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Methionine metabolism regulates T cell fate by KCa3.1 activity (Cut&Run)
GEO Series GSE299551. Mus musculus. 18 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Cut and run analysis in human trophoblast stem cells (CT27) upon pulling down with GATA2 and GATA3 antibody
GEO Series GSE214486. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The pioneer factor SOX9 competes for epigenetic factors to switch stem cell fates [CUT&RUN]
GEO Series GSE208070. Mus musculus. 41 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Bidirectional perisomatic inhibitory plasticity of a Fos neuronal network [CUT&RUN]
GEO Series GSE158838. Mus musculus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Loss of MLL3/4 decouples enhancer H3K4 monomethylation, H3K27 acetylation, and gene activation [CUT&RUN]
GEO Series GSE212949. Mus musculus. 21 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CUT&RUN sequencing on wildtype HSCs, MPP3s, GMPs, and macrophages with four weeks M. avium infection
GEO Series GSE277899. Mus musculus. 36 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Deciphering the function of intrinsic and genomics-driven epigenetic heterogeneity in head and neck cancer progression with single-nucleus CUT&RUN [single-nucleus CUT&RUN]
GEO Series GSE212249. Homo sapiens. 3955 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
OCT4-SOX2 dimers reshape the epigenome to promote neural crest multipotency [CUT&RUN]
GEO Series GSE163960. Gallus gallus; Homo sapiens. 9 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CUT&RUN of TAF4b and H3K4me3 in E16.5 oocytes
GEO Series GSE186991. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.