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66 results for “Canopy communities”

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zenodo36/100

Functioning of a canopy-dominated intertidal community during emersion: highly productive but heterotrophic at the annual scale - R code

This repository contains the data and code for our paper: Claire Golléty, Jon Yearsley, Aline Migné, Dominique Davoult (2024). Functioning of a canopy-dominated intertidal community during emersion: highly productive but heterotrophic at the annual scale. Marine Biology https://doi.org/10.1007/s00227-024-04395-5

opencc-by-4.0Mar 2024View details →

dryad36/100

Metabarcoding of canopy arthropods reveals negative impacts of forestry insecticides on community structure across multiple taxa

1. Insecticides used to combat outbreaks of forest defoliators can adversely affect non-target arthropods. Forest use insecticides typically suppress Lepidoptera larvae which are the keystone of the canopy community of deciduous oak forests. The abrupt removal of this dominant component of the food web could have far-reaching implications for forest ecosystems, yet it is rarely investigated in practice owing to several methodological shortcomings. The taxonomic impediment and the biased nature of arthropod sampling techniques particularly impede the assessment of insecticide impacts on diverse communities. 2. To tackle this issue, we propose an experimental approach combining pyrethrum knockdown sampling and species determination via DNA metabarcoding, using community subsampling to derive estimates of species abundances. We applied this protocol to investigate the short-term effects of the insecticides diflubenzuron (DFB) or Bacillus thuringiensis var. kurstaki (BTK) on canopy-dwelling arthropod communities in German oak woodlands. 3. Our approach allowed us to include most of the detected diversity and integrate species abundances in our analyses. By classifying arthropod species into assemblages based on their expected sensitivity rather than coarse taxonomic groupings, we could unveil substantial effects of DFB across multiple taxa five weeks after application. 4. Although strong effects on single species appear related to direct toxicity, substantial impacts of DFB on parasitoids and xylophagous beetles suggest that anti-defoliator treatments can have previously unsuspected indirect effects on some components of forest arthropod communities. The impacts of BTK on community structure were consistent with but much weaker than that of DFB. 5. Synthesis and applications. Comparing diversity patterns in the arthropod communities of sprayed and unsprayed oak canopies, our results show that selective insecticides can alter species diversity in presumably non-sensitive taxa. Even though the ecological significance of these impacts has yet to be assessed in an operational setting, their existence calls for increased regulatory scrutiny on indirect effects. As community approaches become more attainable with the rapid development of DNA metabarcoding, we suggest the inclusion of community level endpoints as regulatory requirements for the approval of forest use insecticides.

opencc-zeroJan 2022View details →

zenodo36/100

Code for data analysis - intra-community variability of leaf-out in temperate tree canopies

The code and data were used for producing the results of "Phenology across scales: an intercontinental analysis of leaf-out dates in temperate deciduous tree communities", by Delpierre et al.

opencc-by-4.0May 2024View details →

dryad36/100

Data from: Structure and composition of a canopy-beetle community (Coleoptera) in a Neotropical lowland rainforest in southern Venezuela

Species richness, community structure, and taxonomic composition are important characteristics of biodiversity. Beetle communities show distinct diversity patterns according to habitat attributes. Tropical rainforest canopies, which are well known for their richness in Coleoptera, represent such a conspicuous life zone. Here, I describe a canopy-inhabiting beetle community associated with 23 tree species in a Neotropical lowland rainforest. Adult beetles were sampled manually and in aerial traps using a large tower crane for a cumulative year. The sample revealed 6738 adult beetles, which were assigned to 862 (morpho-)species in 45 families. The most species-rich beetle families were Curculionidae (n = 246), Chrysomelidae (n = 121), and Cerambycidae (n = 89). The most abundant families were Curculionidae (n = 2746) and Chrysomelidae (n = 1409). Dominant beetle families were found in most assemblages. The beetle community consisted of 400 singletons (46.4%). A similar proportion was evident for assemblages of single tree species. I found that 74.5% of all beetle species were restricted in their occurrence on host trees to the phenological season and time of the day. This daily and seasonal migration causes patterns similar to mass effects, and therefore accounts for the high proportion of singletons.

opencc-zeroJul 2024View details →

dryad36/100

Data from: Disentangling the factors that shape bromeliad and ant communities in the canopies of cocoa agroforestry and preserved Atlantic Forest

In tropical forest canopies, host tree characteristics shape epiphyte communities, and both host tree characteristics and epiphytes determine invertebrate communities, e.g., ants. Tree height is among the factors most often mentioned as a strong predictor for both bromeliad and ant communities. However, many factors interact dynamically in shaping the tree-bromeliad-ant association. Here, we investigated the effects of the host tree and canopy structural characteristics on both bromeliads and ants. We sampled bromeliads on 180 trees and ants in 360 bromeliads living on a subset of 60 of those trees in a continuum of native forest fragments and agroforestry systems in the Atlantic Forest, a Brazilian biodiversity hotspot. We found that the host trees' crown area had a positive effect on the abundance of bromeliads. Also, the introduced tree species had higher abundance of bromeliads than native tree species. Moreover, we found that the ant species composition was different between native and introduced trees. In addition, we observed a positive effect of the size of bromeliads and tree crown height on ant species richness on both bromeliad and tree scales, but there was no effect of tree height. Taken together, our findings highlight the importance of trees with large crowns for the maintenance of bromeliads, which are also associated with richer ant communities in both Atlantic Forest and agroforestry systems. These results emphasize the importance of trees with larger crowns for biodiversity conservation in both native forest fragments and agroforestry systems.

opencc-zeroSep 2021View details →

dryad36/100

Data from: Community-level canopy reflectance in grazed grasslands is linked to the habitat preferences of individual plant species

Spectral remote sensing provides tools for biological monitoring and can be used to characterize habitat quality in grasslands. These data have been used to study the relationships between plant community composition and remotely sensed canopy reflectance in grazed grasslands. The study area is located on the island of Öland, Sweden, and the data were collected in grazed grasslands that represent a succession from previously arable fields to old semi-natural pastures. All included grassland sites have been assigned to three different classes of grassland age, defined by the grazing continuity in years: young (5–14 years), intermediate-aged (15–49 years), and old (>50 years). The plant community data consist of presences/absences for 100 vascular plant species in 104 (4 m × 4 m) sample plots positioned in open grassland vegetation. Information on species' habitat preferences is included and has been used to explain the associations between plant species' occurrences and the variation in community-level canopy reflectance. The remote sensing data consist of 317 hyperspectral bands in the wavelength regions 414–1322 nm, 1496–1797 nm, and 2050–2351 nm, and show the mean reflectance in each spectral band for the 104 sample plots. The main gradient in the hyperspectral data is characterized by contrasting reflectance values between bands located in the NIR spectra and bands located in the red, blue, and SWIR spectra. Grassland canopy reflectance was able to explain variation in the occurrences of individual plant species, particularly those with distinct habitat preferences. Species' habitat preferences indicated that vegetation reflectance in the red, blue, SWIR, and NIR spectra was linked to the plant-availability of mineral nitrogen. In contrast, species' phosphorus preferences showed stronger associations with reflectance in the green and red-edge spectra.

opencc-zeroMay 2023View details →

dryad36/100