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89 results for “Chlamydomonas reinhardtii”
Data from: The experimental evolution of herbicide-resistance in Chlamydomonas reinhardtii results in a positive correlation between fitness in the presence and absence of herbicides
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Data from: Positive size-speed relationships in gametes and vegetative cells of Chlamydomonas reinhardtii; implications for the evolution of sperm.
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Data from: Fitness change in relation to mutation number in spontaneous mutation accumulation lines of Chlamydomonas reinhardtii
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Data from: Flow cytometric methods for indirect analysis and quantification of gametogenesis in Chlamydomonas reinhardtii (Chlorophyceae)
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Data from: Phosphoprotein SAK1 is a regulator of acclimation to singlet oxygen in Chlamydomonas reinhardtii
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Data from: Spontaneous mutation accumulation in multiple strains of the green alga, Chlamydomonas reinhardtii
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Systematic characterization of gene function in the photosynthetic alga Chlamydomonas reinhardtii
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Selecting for Chlamydomonas reinhardtii fitness in the KSC Veggie Unit
The Space Algae Experiment Verification Test completed a competitive growth selection on mutagenized microalgae in a series of batch cultures that were passaged for three growth cycles. The experiment was conducted with ground control conditions similar to those actually used in spaceflight. Cultures were limited in growth rate due to gas permeable membranes to provide oxygen and carbon dioxide exchange and a lack of agitation to mix the cells throughout the liquid media. Two strains were grown and three biological replicates were completed for each strain. Specific variables (factors) tested were: 1) The effect of UVC mutagenesis was tested by sampling the algae cultures prior to mutagenesis. 2) The sensitivity of different strains was tested by conducting the experiment with a wild-type and cell wall mutant (cw15) strain. 3) The effect of competitive growth was tested by sampling each biological replicate experiment at the end of each growth cycle. 4) The effect of live culture storage in the dark was tested by sampling each growth cycle twice. At the time of passage a sample of cells was pelleted and frozen. The cultures were then stored in the dark in a Cargo Transport Bag (CTB) to simulate storage on the ISS and return of cultures. This factor tested whether cultures could be stored alive in the dark or if samples needed to be fixed at the time of passage in order to get an accurate representation of the genetic variation in each cycle of growth. Paired-end whole genome sequencing was completed for 38 samples: 2 strains pre mutagenesis and 2 strains X 3 biological replicates X 3 growth cycles X 2 storage conditions.
Transcriptomics analysis of the Chlamydomonas reinhardtii diurnal cycle.
GEO Series GSE112394. Chlamydomonas reinhardtii. 16 samples. Type: Expression profiling by high throughput sequencing.
Whole genome transcriptome analysis (RNAseq) identifies genes upregulated during ciliogenesis in Chlamydomonas reinhardtii
GEO Series GSE43004. Chlamydomonas reinhardtii. 5 samples. Type: Expression profiling by high throughput sequencing.
Base-resolution profiling of 5-glyceryl-methylcytosine in Chlamydomonas reinhardtii via deaminase-assisted sequencing [Bisulfite-Seq]
GEO Series GSE301796. Chlamydomonas reinhardtii. 18 samples. Type: Methylation profiling by high throughput sequencing.
Bilin-dependent photoacclimation in Chlamydomonas reinhardtii
GEO Series GSE77388. Chlamydomonas reinhardtii. 20 samples. Type: Expression profiling by high throughput sequencing.
The acclimation of Chlamydomonas reinhardtii to anaerobiosis involves plant and animal strategies
GEO Series GSE42035. Chlamydomonas reinhardtii. 12 samples. Type: Expression profiling by high throughput sequencing.
Response of Chlamydomonas reinhardtii to different oxidative and electrophilic stress conditions
GEO Series GSE30646. Chlamydomonas reinhardtii. 15 samples. Type: Expression profiling by array.
Systems analysis of the response of photosynthesis, metabolism and growth to an increase in irradiance in the photosynthesis model organism Chlamydomonas reinhardtii
GEO Series GSE56800. Chlamydomonas reinhardtii. 20 samples. Type: Expression profiling by array.
divergence in basal transcriptomes of "Wild Type" Chlamydomonas reinhardtii strains
GEO Series GSE296941. Chlamydomonas reinhardtii. 28 samples. Type: Expression profiling by high throughput sequencing.
Diurnal Light Transitions in Chlamydomonas reinhardtii
GEO Series GSE307139. Chlamydomonas reinhardtii. 106 samples. Type: Expression profiling by high throughput sequencing.
Change in gene expression in Chlamydomonas reinhardtii upon feeding with hemin and Mg-protoporphyrin
GEO Series GSE20860. Chlamydomonas reinhardtii. 32 samples. Type: Expression profiling by array.
Change in gene expression in Chlamydomonas reinhardtii upon heat shock
GEO Series GSE20859. Chlamydomonas reinhardtii. 8 samples. Type: Expression profiling by array.
Transcriptome response of Chlamydomonas reinhardtii exposed to methylmercury (MeHg)
GEO Series GSE70066. Chlamydomonas reinhardtii. 9 samples. Type: Expression profiling by high throughput sequencing.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.