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150 results for “Family Functioning”
Figs 1–3 in Functional morphology of the male genitalia of the family Autostichidae (Lepidoptera) with description of a new genus and a new species from the Russian Far East
Figs 1–3. Laszlogozmanya eclecticus sp. n., male 1 – adult, holotype; 2 – wing venation;
How can we biochemically validate protein function predictions with the Ras GTPase family? - Associated data
<p>This is the data that accompanies the pub "<a href="https://doi.org/10.57844/arcadia-74ad-345f">How can we biochemically validate ProteinCartography with the Ras GTPase family?</a>" It's part of a group of pubs focused on validating ProtienCartography that begins with "<a href="https://doi.org/10.57844/arcadia-cae9-96c4">A strategy to validate protein functions <em>in vitro</em></a><a href="https://doi.org/10.57844/arcadia-cae9-96c4">." </a></p> <p>For this repository, we ran ProteinCartography <a href="https://github.com/Arcadia-Science/ProteinCartography/releases/tag/v0.5.0">v0.5.0</a> using human HRas and KRas as our inputs for a single run (UniProt ID: <a href="https://www.uniprot.org/uniprotkb/P01112/entry">P01112</a> and <a href="https://www.uniprot.org/uniprotkb/P01116/entry">P01116</a>). We asked for 3,000 Foldseek hits and 7,000 BLAST hits for a total of 10,000 structures. The updated configuration file is in the zipped folder in this repository. Also included in the zipped folder are the inputs, structures of all hits, and all ProteinCartography results. </p> <p>Finally, we created a custom overlay for the protein map using this <a href="https://github.com/Arcadia-Science/2023-actin-embedding/blob/main/notebooks/3_plotting_overlays.ipynb">notebook</a> and the manually annotated TSV file in this repository, where we denoted which group of substrates a protein is predicted to act on based on its annotation from UniProt.</p>
How can we biochemically validate protein function predictions with the deoxycytidine kinase family? - Associated data
<p>This is the data that accompanies the pub "<a href="https://doi.org/10.57844/arcadia-1e5d-e272">How can we biochemically validate ProteinCartography with the deoxycytydine kinase family?</a>" It's part of a group of pubs focused on validating ProtienCartography that begins with "<a href="https://doi.org/10.57844/arcadia-cae9-96c4">A strategy to validate protein functions <em>in vitro</em></a><a href="https://doi.org/10.57844/arcadia-cae9-96c4">." </a></p> <p>For this repository, we ran ProteinCartography <a href="https://github.com/Arcadia-Science/ProteinCartography/releases/tag/v0.5.0">v0.5.0</a> on the deoxycytidine kinase (dCK) using human dCK as our input (UniProt ID: <a href="https://www.uniprot.org/uniprotkb/P27707/entry">P27707</a>). We asked for 3,000 Foldseek hits and 7,000 BLAST hits for a total of 10,000 structures. The updated configuration file is in the zipped folder in this repository. Also included in the zipped folder are the inputs, structures of all hits, and all ProteinCartography results. </p> <p>Finally, we created a custom overlay for the protein map using this <a href="https://github.com/Arcadia-Science/2023-actin-embedding/blob/main/notebooks/3_plotting_overlays.ipynb">notebook</a> and the manually annotated TSV file in this repository, where we denoted which group of substrates a protein is predicted to act on based on its annotation from UniProt.</p>
Data from: The spatial structure of phylogenetic and functional diversity in the United States and Canada: an example using the sedge family (Cyperaceae)
Systematically quantifying diversity across landscapes is necessary to understand how clade history and ecological heterogeneity contribute to the origin, distribution, and maintenance of biodiversity. Here, we chart the spatial structure of diversity among all species in the sedge family (Cyperaceae) throughout the USA and Canada. We first identify areas of remarkable species richness, phylogenetic diversity, and functional trait diversity, and highlight regions of conservation priority. We then test predictions about the spatial structure of this diversity based on the historical biogeography of the family. Incorporating a phylogeny, over 400,000 herbarium records, and a database of functional traits mined from online floras, we find that species richness and functional trait diversity peak in the Northeastern USA, while phylogenetic diversity peaks along the Gulf of Mexico. Floristic turnover among assemblages increases significantly with distance, but phylogenetic turnover is twice as rapid along latitudinal gradients as along longitudinal gradients. These patterns reflect the expected distribution of Cyperaceae, which originated in the tropics but radiated in temperate regions. We identify assemblages with an abundance of rare, range-restricted lineages, and assemblages composed of species generally lacking from diverse regions. We argue that both of these metrics are useful for developing targeted conservation strategies. We use the data generated here to establish future research priorities, including the testing of a series of hypotheses regarding the distribution of chromosome numbers, photosynthetic pathways, and resource partitioning in sedges.
Data set - Stress, Mental Health and Sociocultural Adjustment in Third Culture Kids: The Mediating Roles of Resilience and Family Functioning
<p>this data set contains data derived from a cross-sectional study which explores the contributions of proximal and contextual factors in the adjustment process of a sample of internationally mobile children and adolescents having relocated to Switzerland. </p> <p>scales include child perceived stress (PSS-C; White, 2014), acculturative stress (ASIC; Suarez-Morales et al., 2007), resilience (CYRM-12; Liebenberg et al., 2013), mental health difficulties SDQ (R. Goodman, 1997), socio cultural adjustmen (SCAS-Child; Ward & Kennedy, 1999) and family functioning (McMaster Family Assessment Device (Epstein et al., 1983)). </p> <p>child age, arrival in Switzerland and cemographic information on country of origin are included</p>
Data from: The spatial structure of phylogenetic and functional diversity in the United States and Canada: an example using the sedge family (Cyperaceae)
Open the record for dataset details and reuse information.
Data from: Predicting function from sequence in a large multifunctional toxin family
Venoms contain active substances with highly specific physiological effects and are increasingly being used as sources of novel diagnostic, research and treatment tools for human disease. Experimental characterisation of individual toxin activities is a severe rate-limiting step in the discovery process, and in-silico tools which allow function to be predicted from sequence information are essential. Toxins are typically members of large multifunctional families of structurally similar proteins that can have different biological activities, and minor sequence divergence can have significant consequences. Thus, existing predictive tools tend to have low accuracy. We investigated a classification model based on physico-chemical attributes that can easily be calculated from amino-acid sequences, using over 250 (mostly novel) viperid phospholipase A2 toxins. We also clustered proteins by sequence profiles, and carried out in-vitro tests for four major activities on a selection of isolated novel toxins, or crude venoms known to contain them. The majority of detected activities were consistent with predictions, in contrast to poor performance of a number of tested existing predictive methods. Our results provide a framework for comparison of active sites among different functional sub-groups of toxins that will allow a more targeted approach for identification of potential drug leads in the future.
Mental health, suicide attempt, and family function for adolescents' primary health care during the COVID-19 pandemic
<p>The purpose of the study was to identify associations between mental health risk, suicide attempt, and family function. The instruments used were the Self-Report Questionnaire, the Suicide Risk Assessment Scale and the family APGAR.</p>
FIGURES 1 – 6 in Coxal combs in the Cydnidae sensu lato and three other related " cydnoid " families - Parastrachiidae, Thaumastellidae, Thyreocoridae (Hemiptera: Heteroptera): functional, taxonomic, and phylogenetic significance
FIGURES 1 – 6. Coxal combs, basic types of setae. 1 – 2, stout setae, Scaptocoris australis (1), Parastrachia nagaensis (2); 3 – 4, gutter-like setae, Macroscytus brunneus (3), Scoparipes stygius (4); 5 – 6, scale-like setae, Amnestus raunoi (5), Chilocoris nitidus (6).
FIGURES 19 – 24. Coxal combs. 19 – 21 in Coxal combs in the Cydnidae sensu lato and three other related " cydnoid " families - Parastrachiidae, Thaumastellidae, Thyreocoridae (Hemiptera: Heteroptera): functional, taxonomic, and phylogenetic significance
FIGURES 19 – 24. Coxal combs. 19 – 21, Cydninae: Geotomini s. lato: Lactistes truncatoserratus (19), Macroscytus brunneus (20), Scoparipes stygius (21); 22 – 24, Cydnidae: Sehirinae: Sehirini s. lato: Canthophorus impressus (22), Lalervis expansa (23), Sehirus cypriacus (24).
FIGURES 7 – 12. Coxal combs. 7 in Coxal combs in the Cydnidae sensu lato and three other related " cydnoid " families - Parastrachiidae, Thaumastellidae, Thyreocoridae (Hemiptera: Heteroptera): functional, taxonomic, and phylogenetic significance
FIGURES 7 – 12. Coxal combs. 7, Cydnidae: Amnestinae, Amnestus raunoi; 8, Cydnidae: Amaurocorinae, Linospa candida; 9 – 10, Cydnidae: Garsauriinae: Garsauria usambarica (9), Blaena setosa (10); 11 – 12, Cydnidae: Cephalocteinae: Scaptocorini: Scaptocoris australis (11), Stibaropus pseudominor (12). Coxal combs indicated by arrows.
FIGURES 25 – 30. Coxal combs, hypothesized anagenetic trend. 25 in Coxal combs in the Cydnidae sensu lato and three other related " cydnoid " families - Parastrachiidae, Thaumastellidae, Thyreocoridae (Hemiptera: Heteroptera): functional, taxonomic, and phylogenetic significance
FIGURES 25 – 30. Coxal combs, hypothesized anagenetic trend. 25, setae normally developed (Scaptocoris australis); 26, setae gradually opened apically (Scoparipes stygius); 27, setae opened along almost their entire length (Macroscytus brunneus); 28, setae opened along their entire length (Lactistes truncatoserratus); 29, setae opened, somewhat broadened and flattened (Garsauria usambarica); 30 - 31, setae scale-like, flattened and much broadened (Amnestus raunoi, 30; Chilocoris nitidus, 31).
FIGURES 13 – 18. Coxal combs. 13 – 16 in Coxal combs in the Cydnidae sensu lato and three other related " cydnoid " families - Parastrachiidae, Thaumastellidae, Thyreocoridae (Hemiptera: Heteroptera): functional, taxonomic, and phylogenetic significance
FIGURES 13 – 18. Coxal combs. 13 – 16, Cydnidae: Cydninae: Cydnini: Chilocoris nitidus, 1 st coxae (13), Chilocoris nitidus, 3 rd coxae (14); Cydnus aterrimus (15), C. pericarti (16); 17 – 18; Cydnidae: Cydninae: Geotomini s. lato: Adrisa magna (17), Geocnethus plagiatus (18).
Fueling ab initio folding with oceanic metagenomics enables structure and function predictions of new protein families
<p>Code and protein sequence database to construct multiple sequence alignment from Tara Ocean data.</p>
Understanding structural and functional diversity of ATP-PPases using protein domains and functional families in CATH database
<p>The dataset of AF2-predicted HUP domains with overall pLDDT > 90, culled at 90% identity.</p>
The Effect of a Micro-Appreciation Intervention (Three-Things Journal Application) on Caregiver Burden, Family Functioning, and Happiness Levels for Mothers of Children With Autism Spectrum Disorder
ClinicalTrials.gov study NCT07124091. IPD Sharing: NO. Countries: 1. Publications: 0.
The Role of Family Functioning in Promoting Adaptation in Siblings of Individuals With Duchenne Muscular Dystrophy (DMD)
ClinicalTrials.gov study NCT01386515. IPD Sharing: Not stated. Countries: 1. Publications: 3.
Effectiveness of a Telephone Intervention Program in Improving Depression, Coping, and Family Functioning in HIV-Infected Individuals and Caregivers
ClinicalTrials.gov study NCT00183781. IPD Sharing: Not stated. Countries: 1. Publications: 2.
All in the Family: Promoting Family Function Through Physical Activity
ClinicalTrials.gov study NCT06098716. IPD Sharing: NO. Countries: 1. Publications: 1.
The Role of Family Functioning in Adaptation to Being a Caregiver of an Individual With Rett Syndrome
ClinicalTrials.gov study NCT00891956. IPD Sharing: Not stated. Countries: 1. Publications: 3.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.