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Dataset results
78 results for “IN Cell Analyzer”
Analyzing the effect of Lef1 deletion in mouse intestinal organoids with single-cell RNA sequencing
GEO Series GSE179853. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome profiling of maize anthers using genetic ablation to analyze pre-meiotic and tapetal cell types
GEO Series GSE12756. Zea mays. 72 samples. Type: Expression profiling by array.
Identification of SERPINE1 as a Regulator of Glioblastoma Cell Dispersal via Analyzing Dynamic Transcriptome of Dispersing Cells
GEO Series GSE130857. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Next generation sequencing quantitatively analyzes transcriptomes of primary CLL cells co-culture with Wild Type or prkcb-/- bone marrow mesenchymal stromal cells
GEO Series GSE119808. Homo sapiens. 36 samples. Type: Expression profiling by high throughput sequencing.
Single-cell gene expression profiles of pancreatic islets from two β-cell specific knockout mouse models (βZKO-Mip and βZKO-Rip), along with RIP-Cre and MIP-Cre mice, were analyzed after being fed a h
GEO Series GSE288211. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencing
GEO Series GSE47343. Lambdavirus lambda; Mus musculus. 36 samples. Type: Methylation profiling by high throughput sequencing.
Samples from prospectively enrolled patients with histologically confirmed primary Head and Neck squamous cell carcinoma (HNSCC) were analyzed for miRNA profiling
GEO Series GSE216630. Homo sapiens. 253 samples. Type: Non-coding RNA profiling by array.
Analyze the transcriptional signature of kidney glomerular cells in mice
GEO Series GSE273761. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Analyzing the effect of Lef1 deletion in mouse intestinal adenoma cells with single-cell RNA sequencing
GEO Series GSE179483. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Transcriptional function of E2A, Ebf1, Pax5, Ikaros and Aiolos analyzed by in vivo acute protein degradation in early B cell development [RNA-seq]
GEO Series GSE260522. Mus musculus. 86 samples. Type: Expression profiling by high throughput sequencing.
The effect of DZNeP-exposure on activation of hepatic stellate cells analyzed by RNA-sequencing.
GEO Series GSE121736. Rattus norvegicus. 6 samples. Type: Expression profiling by high throughput sequencing.
Novel Single-Cell Multiomics Approach to Analyze Replication Timing and Gene Expression in Mouse Preimplantation Embryos
GEO Series GSE284010. Mus musculus. 248 samples. Type: Expression profiling by high throughput sequencing; Other.
ChIP-on-chip experiment from Ramos cells to analyze genome-wide CRTC2 binding sites in germinal center B cells
GEO Series GSE23170. Homo sapiens. 8 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Single-cell chromatin conformation capture of diploid cells by Dip-C (analyzed with the dip-c package)
GEO Series GSE117109. Mus musculus; Homo sapiens. 61 samples. Type: Other; Third-party reanalysis.
Niclosamide as a chemical probe for analyzing SARS-CoV-2 modulation of host cell lipid metabolism
<p>SARS-CoV-2 subverts host cell processes to facilitate rapid replication and dissemination, and this leads to pathological inflammation. We used niclosamide (NIC), a poorly soluble anti-helminth drug identified for repurposed treatment of COVID-19, which activates the cells' autophagic and lipophagic processes as a chemical probe to determine if it can modulate the host cell's total lipid profile that would otherwise be either amplified or reduced during SARS-CoV-2 infection. Through parallel lipidomic and transcriptomic analyses we observed massive reorganization of lipid profiles of SARS-CoV-2 infected Vero E6 cells, especially with triglycerides, which were elevated early during virus replication, but decreased thereafter, as well as plasmalogens, which were elevated at later timepoints during virus replication, but were also elevated under normal cell growth. These findings suggested a complex interplay of lipid profile reorganization involving plasmalogen metabolism. We also observed that NIC treatment of both low and high viral loads does not affect virus entry. Instead, NIC treatment reduced the abundance of plasmalogens, diacylglycerides, and ceramides, which we found elevated during virus infection in the absence of NIC, resulting in a significant reduction in the production of infectious virions. Unexpectedly, at higher viral loads, NIC treatment also resulted in elevated triglyceride levels, and induced significant changes in phospholipid metabolism. We posit that future screens of approved drugs should prioritize compounds that effectively counter SARS-CoV-2 subversion of lipid metabolism, thereby reducing virus replication, egress, and the subsequent regulation of key lipid mediators of pathological inflammation.</p>
Oral Chemotherapeutic Drugs Were Analyzed in Patients With Driver Gene Negative Locally Advanced/Advanced Non-small Cell Lung Cancer With PS Score 2 A Prospective, Single-arm, Multicenter, Observation
ClinicalTrials.gov study NCT06310915. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Effectiveness of Point of Care Complete Blood Cell Count Analyzer in Reducing Time to Results
ClinicalTrials.gov study NCT04769336. IPD Sharing: NO. Countries: 1. Publications: 0.
Collecting and Analyzing Tissue Samples From Patients Undergoing Surgery for Non-Small Cell Lung Cancer
ClinicalTrials.gov study NCT00897117. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Single-cell Multiomics and Spatiotemporal Omics Analyze the Mechanism of Liver Degenerative Disease
ClinicalTrials.gov study NCT07265544. IPD Sharing: NO. Countries: 1. Publications: 0.
Analyzes of Nasal Tissue-resident Memory Immune Cells and Peripheral Memory Cells Able to Migrate to Airway Tissues (MUCOVAC)
ClinicalTrials.gov study NCT06469359. IPD Sharing: NO. Countries: 1. Publications: 0.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.