Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
52
datasets available to search
ShareScore release 0.9.0
Dataset results
52 results for “Lineage barcoding”
Figure 5 from: Wesener T, Voigtländer K, Decker P, Oeyen JP, Spelda J (2016) Barcoding of Central European Cryptops centipedes reveals large interspecific distances with ghost lineages and new species records from Germany and Austria (Chilopoda, Scolopendromorpha). ZooKeys 564: 21-46. https://doi.org/10.3897/zookeys.564.7535
Figure 5 - Frequency distribution of pairwise intraspecific (blue) and interspecific (red) distances. The three lineages of Cryptops parisi treated as different species. Basic table see Suppl. material 1.
Figure 3 from: Pazhenkova EA, Zakharov EV, Lukhtanov VA (2015) DNA barcoding reveals twelve lineages with properties of phylogenetic and biological species within Melitaea didyma sensu lato (Lepidoptera, Nymphalidae). ZooKeys 538: 35-46. https://doi.org/10.3897/zookeys.538.6605
Figure 3 - Fragment of the Bayesian tree of Melitaea didyma complex (haplogroups turkestanica, mixta, chitralensis, mauretanica and didyma) based on analysis of the cytochrome oxidase subunit I (COI) gene. Numbers at nodes indicate Bayesian posterior probability/ML bootstrap/MP bootstrap values, with nonmatching clades using different analyses indicated by '-'. Scale bar = 0.1 substitutions per position.
Figure 4 from: Pazhenkova EA, Zakharov EV, Lukhtanov VA (2015) DNA barcoding reveals twelve lineages with properties of phylogenetic and biological species within Melitaea didyma sensu lato (Lepidoptera, Nymphalidae). ZooKeys 538: 35-46. https://doi.org/10.3897/zookeys.538.6605
Figure 4 - Distribution ranges of haplogroups didyma (■), didymoides (∆), interrupta (●), latonigena (○), liliputana (◊), mauretanica (⃰ ), mixta (▼), neera (▲), occidentalis (#), sutschana (♦), turkestanica (□) and chitralensis (►).
Figure 1 from: Pazhenkova EA, Zakharov EV, Lukhtanov VA (2015) DNA barcoding reveals twelve lineages with properties of phylogenetic and biological species within Melitaea didyma sensu lato (Lepidoptera, Nymphalidae). ZooKeys 538: 35-46. https://doi.org/10.3897/zookeys.538.6605
Figure 1 - The Bayesian tree of Melitaea based on analysis of the cytochrome oxidase subunit I (COI) gene. Numbers at nodes indicate Bayesian posterior probability/ML bootstrap/MP bootstrap values. Scale bar = 0.1 substitutions per position.
Figure 2 from: Pazhenkova EA, Zakharov EV, Lukhtanov VA (2015) DNA barcoding reveals twelve lineages with properties of phylogenetic and biological species within Melitaea didyma sensu lato (Lepidoptera, Nymphalidae). ZooKeys 538: 35-46. https://doi.org/10.3897/zookeys.538.6605
Figure 2 - Fragment of the Bayesian tree of Melitaea didyma complex (haplogroups neera, liliputana, occidentalis, interrupta, latonigena, sutschana and didymoides) based on analysis of the cytochrome oxidase subunit I (COI) gene. Numbers at nodes indicate Bayesian posterior probability/ML bootstrap/MP bootstrap values, with nonmatching clades using different analyses indicated by '-'. Scale bar = 0.1 substitutions per position.
Human lineage tracing enabled by mitochondrial mutations and single cell genomics [TF1_barcoding_scRNA]
GEO Series GSE118203. Homo sapiens. 384 samples. Type: Expression profiling by high throughput sequencing.
Barcode-free prediction of cell lineages from scRNA-seq datasets
GEO Series GSE226169. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Clonal barcoding of endogenous adult hematopoietic stem cells reveals a spectrum of lineage contributions
GEO Series GSE246271. Mus musculus. 80 samples. Type: Other.
Barcode decay Lineage Tracing, BdLT-Seq, unravels lineage-linked transcriptome plasticity [scRNAseq_HA1ER_clone_F12_1F8_1C9]
GEO Series GSE223494. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Barcode decay Lineage Tracing, BdLT-Seq, unravels lineage-linked transcriptome plasticity [scRNAseq_BdLTseq_HA1E_E7_clone]
GEO Series GSE223491. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Barcode decay Lineage Tracing, BdLT-Seq, unravels lineage-linked transcriptome plasticity [scRNAseq_BdLTseq_HA1ER_F12_clone_1]
GEO Series GSE223484. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Barcode decay Lineage Tracing, BdLT-Seq, unravels lineage-linked transcriptome plasticity [scRNAseq_BdLTseq_HA1ER_F12_clone_2]
GEO Series GSE223488. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Barcode decay Lineage Tracing, BdLT-Seq, unravels lineage-linked transcriptome plasticity [scRNAseq_BdLTseq_HA1E_E7_clone_RAS]
GEO Series GSE223492. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Molecular barcodes and single cell transcriptomics to map graft diversity and lineage of human DA neurons in a rat xenograft model of Parkinson’s Disease
GEO Series GSE200610. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
Barcode decay Lineage Tracing, BdLT-Seq, unravels lineage-linked transcriptome plasticity [scRNAseq_BdLTseq_HA1ER_F12_clone_TRAIL]
GEO Series GSE223490. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Human lineage tracing enabled by mitochondrial mutations and single cell genomics [TF1_barcoding_ATAC]
GEO Series GSE118202. Homo sapiens. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Barcode lineage tracking of ferret cortical progeny using TrackerSeq (Mayer lab)
GEO Series GSE233587. Mustela putorius furo. 8 samples. Type: Expression profiling by high throughput sequencing.
Comprehensive spatiotemporal mapping of single-cell lineages in developing mouse brain by CRISPR-based barcoding
GEO Series GSE210139. Mus musculus. 118 samples. Type: Expression profiling by high throughput sequencing; Other.
A mouse model with high clonal barcode diversity for joint lineage, transcriptomic, and epigenomic profiling in single cells [BiSulfite-seq]
GEO Series GSE222328. Mus musculus. 1080 samples. Type: Methylation profiling by high throughput sequencing.
Lineage Tracing of PSC-derived iAEC2 Differentiation Using Lentiviral Barcoding
GEO Series GSE137805. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.