Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

50

datasets available to search

ShareScore release 0.9.0

Reset

Dataset results

50 results for “Microbial Metabolites”

Learn how ShareScore rates datasets ↗
dryad24/100

Data from: Integrated metabolomics and metagenomics analysis of plasma and urine identified microbial metabolites associated with coronary heart disease

Coronary heart disease (CHD) is top risk factor for health in modern society, causing high mortality rate each year. However, there is no reliable way for early diagnosis and prevention of CHD so far. So study the mechanism of CHD and development of novel biomarkers is urgently needed. In this study, metabolomics and metagenomics technology are applied to discover new biomarkers from plasma and urine of 59 CHD patients and 43 healthy controls and trace their origin. We identify GlcNAc-6-P which has good diagnostic capability and can be used as potential biomarkers for CHD, together with mannitol and 15 plasma cholines. These identified metabolites show significant correlations with clinical biochemical indexes. Meanwhile, GlcNAc-6-P and mannitol are potential metabolites originated from intestinal microbiota. Association analysis on species and function levels between intestinal microbes and metabolites suggest a close correlation between Clostridium sp. HGF2 and GlcNAc-6-P, Clostridium sp. HGF2, Streptococcus sp. M143, Streptococcus sp. M334 and mannitol. These suggest the metabolic abnormality is significant and gut microbiota dysbiosis happens in CHD patients.

opencc-zeroDec 2015View details →
zenodo24/100

Data for: Cholesterol-lowering effects of oats induced by microbially produced phenolic metabolites

<p>Data and sequencing raw files to reproduce the display items of the manuscript entitled "Cholesterol-lowering effects of oats induced by microbially produced phenolic metabolites"</p>

restrictedcc-by-4.0Jun 2024View details →
ClinicalTrials.gov24/100

The Colonic Transit Time: a Modifiable Determinant of Intestinal Production and Uptake of Microbial Metabolites?

ClinicalTrials.gov study NCT01869751. IPD Sharing: Not stated. Countries: 1. Publications: 0.

restrictedIPD-UNDECIDEDFeb 2026View details →
ClinicalTrials.gov24/100

Microbial Metabolites and Outcomes of Pregnancy Study

ClinicalTrials.gov study NCT06362356. IPD Sharing: Not stated. Countries: 1. Publications: 0.

restrictedIPD-UNDECIDEDFeb 2026View details →
ClinicalTrials.gov24/100

Correlation of P-glycoprotein Polymorphisms With Microbial Metabolites in Patients With Alzheimer's Disease on Medication

ClinicalTrials.gov study NCT05532644. IPD Sharing: Not stated. Countries: 1. Publications: 0.

restrictedIPD-UNDECIDEDFeb 2026View details →
ClinicalTrials.gov24/100

Intestinal Transport of Microbial Metabolites in Chronic Kidney Disease

ClinicalTrials.gov study NCT01752738. IPD Sharing: Not stated. Countries: 1. Publications: 0.

restrictedIPD-UNDECIDEDFeb 2026View details →
ClinicalTrials.gov24/100

the Association of Intestinal Microbial Metabolites and Cardiac Function in Acute Myocardial Infarction

ClinicalTrials.gov study NCT04955054. IPD Sharing: NO. Countries: 1. Publications: 0.

closedIPD-NOFeb 2026View details →
ClinicalTrials.gov24/100

Gut Microbial Metabolites of Apple Polyphenols

ClinicalTrials.gov study NCT06107192. IPD Sharing: Not stated. Countries: 1. Publications: 0.

restrictedIPD-UNDECIDEDFeb 2026View details →
ClinicalTrials.gov24/100

Multiomic Signatures of Microbial Metabolites Following Prebiotic Fiber Supplementation

ClinicalTrials.gov study NCT03925597. IPD Sharing: NO. Countries: 1. Publications: 0.

closedIPD-NOFeb 2026View details →
dryad24/100

Data from: Integrated metabolomics and metagenomics analysis of plasma and urine identified microbial metabolites associated with coronary heart disease

Open the record for dataset details and reuse information.

publicJun 2016View details →
geo24/100

ACE2 shedding exacerbates sepsis induced gut leak via loss of microbial metabolite 5-MTP

GEO Series GSE267002. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2025View details →
geo24/100

A Surgical Method for Continuous Intra-Portal Infusion of Gut Microbial Metabolites in Mice

GEO Series GSE159775. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2021View details →
geo20/100

Microbial-Derived Metabolites Regulate the Colonic Crypt Niche

GEO Series GSE74601. Mus musculus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJun 2016View details →
geo20/100

Use of RNA sequencing to assess the expression patterns of microbial metabolite transporters present in children post-transplant with and without GVHD

GEO Series GSE102228. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2018View details →
zenodo20/100

Phytogenic additive from mesquite to improve nutrient digestibility, microbial protein, ruminal parameters and blood metabolites in sheep

<p>Crude data of ingestive behavior of sheep.</p>

opencc-by-4.0Jul 2020View details →
geo16/100

The microbial metabolite imidazole propionate modulates hypothalamic activity and stress-induced behaviors

GEO Series GSE300937. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2025View details →
geo16/100

Enteric neuronal GPR41-DHX9 signaling senses microbial metabolites to mediate the crosstalk between serotonergic neurons and intestinal stem cells [RNA-seq]

GEO Series GSE253990. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2025View details →
geo16/100

Mannose enhances anti-PD-1 therapy efficacy in ovarian cancer via modulating gut microbial metabolite.

GEO Series GSE271477. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2025View details →
geo16/100

Gut microbial metabolite trimethylamine N-oxide aggravates pulmonary hypertension

GEO Series GSE190203. Rattus norvegicus. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2022View details →
geo16/100

Mannose enhances anti-PD-1 therapy efficacy in ovarian cancer via modulating gut microbial metabolite [Peritoneum]

GEO Series GSE285965. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2025View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record