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ShareScore release 0.9.0
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28 results for “food-web”
Data from: How geographic productivity patterns affect food-web evolution
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Data from: Species' ecological functionality alters the outcome of fish stocking success predicted by a food-web model
Fish stocking is used worldwide in conservation and management but its effects on food-web dynamics and ecosystem stability are poorly known. To better understand these effects and predict the outcomes of stocking, we used an empirically validated network model of a well-studied lake ecosystem. We simulate two stocking scenarios with two native fish species valuable for fishing. In the first scenario, we stock planktivorous fish (whitefish) larvae in the ecosystem. This leads to 1% increase in adult whitefish biomasses and decreases the biomasses of the top predator (perch). In the second scenario, we also stock perch larvae in the ecosystem. This decreases the planktivorous whitefish and the oldest top predator age class biomasses, and destabilizes the ecosystem. Our results demonstrate that the effects of stocking depend on the species' position in the food web and thus cannot be assessed without considering interacting species. We further show that stocking can lead to undesired outcomes from both management and conservation perspectives. The gains of stocking can remain minor and have adverse effects on the entire ecosystem.
Data from: The role of fish life histories in allometrically scaled food-web dynamics
1. Body size determines key ecological and evolutionary processes of organisms. Therefore, organisms undergo extensive shifts in resources, competitors and predators as they grow in body size. While empirical and theoretical evidence show that these size-dependent ontogenetic shifts vastly influence the structure and dynamics of populations, theory on how those ontogenetic shifts affect the structure and dynamics of ecological networks is still virtually absent. 2. Here, we expand the Allometric Trophic Network (ATN) theory in the context of aquatic food webs to incorporate size-structure in the population dynamics of fish species. We do this by modifying a food web generating algorithm, the niche model, to produce food webs where different fish life-history stages are described as separate nodes which are connected through growth and reproduction. Then, we apply a bioenergetic model that uses the food webs and the body sizes generated by our niche model to evaluate the effect of incorporating life-history structure into food web dynamics. 3. We show that the larger the body size of a fish species respective to the body size of its preys, the higher the biomass attained by the fish species and the greater the ecosystem stability. We also find that the larger the asymptotic body size attained by fish species the larger the total ecosystem biomass, a result that holds true or both the largest fish in the ecosystem and each fish species in the ecosystem. 4. This work provides an expanded ATN theory that generates food webs with life-history structure for chosen species. Our work offers a systematic approach for disentangling the effects of increasing life-history complexity in food-wed models.
Data from: The role of fish life histories in allometrically scaled food-web dynamics
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Data from: Species’ ecological functionality alters the outcome of fish stocking success predicted by a food-web model
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Isotopic signatures of penguin food-web components along the western Antarctic Peninsula, 2009-2011
We evaluated regional variation in reproductive isotopic niche among breeding populations of Adélie (Pygoscelis adeliae), chinstrap (P. antarctica), and gentoo (P. papua) penguins west of the Antarctic Peninsula (AP) to test a hypothesis for sea ice-associated food-web correlates of breeding population change. We rely on signatures of naturally occurring carbon (13C/12C, δ13C) and nitrogen (15N/14N, δ15N) stable isotopes (SI) as integrated proxies of penguin trophic foraging and food-web structure. Each season, study nests, where pairs of adults were present, were individually marked and chosen before the onset of egg-laying, and consistently monitored. When study nests were found at the one-egg stage, both adults were captured to obtain blood samples used for molecular sexing and stable isotope analyses, and measurements of structural size and body mass. At the time of capture, each adult penguin was quickly blood sampled (~1 ml) from the brachial vein. After handling, individuals at study nests were further monitored to ensure the pair reached clutch completion, i.e., two eggs. At approximate an average nest age of five and 15 days, offspring from study nests were captured and quickly blood sampled (≤ ~500 μl for day five chicks, and ≤ ~1 ml for day 15 chicks) from the tarsus vein using a sterile needle and heparinized capillary tubes for day five chicks, and a sterile 3 ml syringe and heparinized infusion needle for day 15 chicks, again to obtain blood tissue for SI analyses. Study nests were monitored for chick survival to 25 days. At five weeks into chick-rearing, older crèched chicks of all three species were captured and quickly blood sampled from study rookeries near Anvers Island. Handling of crèched chicks occurred over a one or two day period, which varied seasonally and by species depending on nest initiation dates. Adélie penguin chicks at Avian Island were sampled on the same day Anvers Island Adélie penguin chicks were sampled. Adélie penguin chicks a
Impact of human activities on the riverine food-web revealed by environmental DNA
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Food-web structure in streams and lakes
<p>Datasets to work on https://github.com/CamilleLeclerc/FoodWebsRiverLake</p> <p>in test!</p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.