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41 results for “native promoters”
Non-native plant removal and high rainfall years promote post-fire recovery of Artemisia californica in southern California sage scrub
<p>Non-native plant invasions, changes in fire regime, and increasing drought stress all pose important threats to biodiverse mediterranean-climate shrublands. These factors can also interact, with fire and drought potentially creating opportunities for non-native species to establish dominance before native shrubs recover. We carried out post-fire demographic monitoring of the common native shrub <i>Artemisia californica</i> in a southern California sage scrub fragment for 7 years, including several with very low rainfall. Experimental removals of non-native plants were included for the first 4 years. We quantified <i>A. californica</i> post-fire crown resprouting and seedling emergence, and tested effects of precipitation, non-native plants, and their interactions on seedling and adult survival. Only 7 <i>A. californica</i> were confirmed as resprouts; almost all individuals established after the fire from seedlings, with 90% of emergence occurring in the second growing year after fire (spring 2015). Higher spring precipitation increased both adult and seedling survival. Non-native grasses and forbs rapidly recolonized control plots, but the removal treatment reduced non-native cover by nearly 60%. For seedlings, non-native removal reduced the probability of dropping leaves by start of summer drought and increased survival both directly and through positive interactions with rainfall. Non-native removal also reduced mortality in smaller adult plants. By 2020, mean <i>A. californica</i> canopy area was nearly four times greater in non-native removal plots. These findings reinforce the high vulnerability of sage scrub habitat to post-fire loss of shrub cover and potential type conversion, particularly with increasing drought frequency and in stands and species with limited crown resprouting. Yet they also illustrate the potential for targeted management of non-natives immediately after fire to promote recovery of native shrubs in this increasingly endangered community.</p>
Non-native plant removal and high rainfall years promote post-fire recovery of Artemisia californica in southern California sage scrub
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ELL3 promotes stem cell native to primed transition through LINE-based enhancers [RNA-Seq]
GEO Series GSE208226. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Suppression of ischemia in arterial occlusive disease by JNK-promoted native collateral artery development
GEO Series GSE71159. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Analytical kinetic model of native tandem promoters in E. coli
GEO Series GSE183139. Escherichia coli. 12 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome profiling of A. thaliana expressing auxin degradation resistant IAA26-P108H-GFP from the IAA26 native promoter
GEO Series GSE75983. Arabidopsis thaliana. 12 samples. Type: Expression profiling by high throughput sequencing.
Combining the CowPEAsy web application with in planta agroinfiltration for native promoter validation in Vigna unguiculata
GEO Series GSE280644. Vigna unguiculata. 30 samples. Type: Expression profiling by high throughput sequencing.
ELL3 promotes stem cell native to primed transition through LINE-based enhancers
GEO Series GSE208227. Mus musculus. 26 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
A library of native and synthetic yeast core promoters driving YFP expression
GEO Series GSE68168. Saccharomyces cerevisiae. 1 samples. Type: Other.
ELL3 promotes stem cell native to primed transition through LINE-based enhancers [ATAC-seq]
GEO Series GSE225176. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CDK-Mediator and FBXL19 cooperate in the induction of developmental genes by promoting regulatory interactions [Native ChIP-seq]
GEO Series GSE141918. Mus musculus. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ELL3 promotes stem cell native to primed transition through LINE-based enhancers [4C-seq]
GEO Series GSE229447. Mus musculus. 2 samples. Type: Other.
PGC 1α Senses the CBC of Pre-mRNA to Dictate the Fate of Promoter-Proximally Paused RNAPII [RIP-seq native]
GEO Series GSE197303. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Interdependence of a mammary-specific super-enhancer and its native promoter facilitates gene activation during pregnancy
GEO Series GSE145193. Mus musculus. 34 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ELL3 promotes stem cell native to primed transition through LINE-based enhancers [ChIP-Seq]
GEO Series GSE207397. Mus musculus. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Evaluation the effects of ectopic expression of TaF5H1 in Arabidopsis driven by its native promoter on the the cell wall biosynthesis and salt tolerance by RNA-seq
GEO Series GSE199116. Arabidopsis thaliana. 12 samples. Type: Expression profiling by high throughput sequencing.
Robust regulatory interplay of enhancers, facilitators, and promoters in a native chromatin context [PRO-Seq]
GEO Series GSE299354. Homo sapiens. 30 samples. Type: Other.
ARID2 promotes clear cell renal cell carcinoma in the absence of functional PBRM1 [Histone modification native ChIP-seq]
GEO Series GSE102804. Homo sapiens. 15 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Robust regulatory interplay of enhancers, facilitators, and promoters in a native chromatin context [amplicon sequencing]
GEO Series GSE299355. Homo sapiens. 18 samples. Type: Other.
Robust regulatory interplay of enhancers, facilitators, and promoters in a native chromatin context [ATAC-Seq]
GEO Series GSE299351. Homo sapiens. 24 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.