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datasets available to search
ShareScore release 0.9.0
Dataset results
29 results for “pollen collection”
The Late Bernard Maloney's Pollen type collection from SE Asia
<p>This word document contains pollen and spore reference material from SE Asia (38 plant species), belonging to the late Dr. Bernard Maloney. The type slides were deposited by Bernard at the Palaeoecology department in Queens University Belfast. In 2005 I noticed that some of the type slides were deteriorating; I also felt that the slides were not accessible for other researchers working on SE Asian material and therefore decided to photograph the slides in order to preserve what was left. Unfortunately it has taken me until 2019 to make the images more widely available, which is what I am attempting to do with this document. Despite the varying conditions of the pollen images I hope that they will be of some benefit to researchers working in SE Asian.</p>
Linked collectors and determiners for: University of Amsterdam (NL) - Páramo pollen reference collection.
Natural history specimen data linked to collectors and determiners held within, "University of Amsterdam (NL) - Páramo pollen reference collection". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/1edaeec2-9fdf-48d2-a459-2bb8635e9aba">https://bionomia.net/dataset/1edaeec2-9fdf-48d2-a459-2bb8635e9aba</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/1edaeec2-9fdf-48d2-a459-2bb8635e9aba">https://gbif.org/dataset/1edaeec2-9fdf-48d2-a459-2bb8635e9aba</a>. Formatted as a Frictionless Data package.
Supplementary material 7 from: Kolter A, Husemann M, Podsiadlowski L, Gemeinholzer B (2023) Pollen metabarcoding of museum specimens and recently collected bumblebees (Bombus) indicates foraging shifts. Metabarcoding and Metagenomics 7: e86883. https://doi.org/10.3897/mbmg.7.86883
Raw ASV data
Supplementary material 1 from: Kolter A, Husemann M, Podsiadlowski L, Gemeinholzer B (2023) Pollen metabarcoding of museum specimens and recently collected bumblebees (Bombus) indicates foraging shifts. Metabarcoding and Metagenomics 7: e86883. https://doi.org/10.3897/mbmg.7.86883
Optimizations
Supplementary material 6 from: Kolter A, Husemann M, Podsiadlowski L, Gemeinholzer B (2023) Pollen metabarcoding of museum specimens and recently collected bumblebees (Bombus) indicates foraging shifts. Metabarcoding and Metagenomics 7: e86883. https://doi.org/10.3897/mbmg.7.86883
R pipeline and reference database
Supplementary material 3 from: Kolter A, Husemann M, Podsiadlowski L, Gemeinholzer B (2023) Pollen metabarcoding of museum specimens and recently collected bumblebees (Bombus) indicates foraging shifts. Metabarcoding and Metagenomics 7: e86883. https://doi.org/10.3897/mbmg.7.86883
trnL-P6 protocol - primer sequences
Supplementary material 4 from: Kolter A, Husemann M, Podsiadlowski L, Gemeinholzer B (2023) Pollen metabarcoding of museum specimens and recently collected bumblebees (Bombus) indicates foraging shifts. Metabarcoding and Metagenomics 7: e86883. https://doi.org/10.3897/mbmg.7.86883
Reference database protocol
Supplementary material 2 from: Kolter A, Husemann M, Podsiadlowski L, Gemeinholzer B (2023) Pollen metabarcoding of museum specimens and recently collected bumblebees (Bombus) indicates foraging shifts. Metabarcoding and Metagenomics 7: e86883. https://doi.org/10.3897/mbmg.7.86883
DNA extraction protocol
Supplementary material 5 from: Kolter A, Husemann M, Podsiadlowski L, Gemeinholzer B (2023) Pollen metabarcoding of museum specimens and recently collected bumblebees (Bombus) indicates foraging shifts. Metabarcoding and Metagenomics 7: e86883. https://doi.org/10.3897/mbmg.7.86883
Sequence processing workflow
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.