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302 results for “population dispersal”
Data and codes from "How does dispersal shape the genetic structure of animal populations in European cities? A simulation approach"
<p>Codes and data used for "Savary et al. How does dispersal shape the genetic structure of animal populations in European cities? A simulation approach".</p> <p> </p>
Efficacy, Safety and Tolerability of KAF156 in Combination With Lumefantrine Solid Dispersion Formulation (LUM-SDF) in Pediatric Population With Uncomplicated Plasmodium Falciparum Malaria
ClinicalTrials.gov study NCT04546633. IPD Sharing: YES. Countries: 5. Publications: 1.
Data from: Spatial sorting caused by downstream dispersal: Implication for morphological evolution in isolated populations of fat minnow inhabiting small streams flowing through terraced rice paddies
Open the record for dataset details and reuse information.
First come, first served: possible role for priority effects in marine populations under different degrees of dispersal potential
<p>Aim Studying clearly delineated populations in marine lakes, islands of sea, we investigate the interplay of habitat size, immigration, and priority effects in shaping marine population genetic structure. Location Marine lakes and coastal locations in Indonesia, Palau, Papua New-Guinea and Australia. Taxon Mussels (Mytillidae, Brachidontes spp.) Methods Populations were sampled from four coastal locations and 22 marine lakes of similar age (~8,000 years), yet differing in size (0.04 - 4.7 km2) and degree of connection to the adjacent sea. While some lakes are highly connected, allowing potential influx of larvae from the sea, others have very limited water exchange. We assessed the phylogeographic structure and demographic history using mitochondrial and nuclear DNA sequence data, and combined this with geometric morphometrics. The effects of lake characteristics on population genetic diversity and structure were tested using linear regression and Mantel tests. Results Each lake contained one of six distinct genetic lineages, which were characterized by deep phylogenetic splits and significant morphometric differences. These lineages likely represent separate species. The lineages showed similar demographic patterns, with lakes containing founder populations that rapidly expanded and diverged. Genetic diversity within lake populations was significantly correlated with lake area, but not with physical connection to the adjacent sea. Within lineages that occurred in multiple lakes there was strong population structure (average ΦST 0.65), which did not conform to an isolation-by-distance pattern or to the degree of dispersal potential. Main Conclusions Marine lakes across a gradient of physical isolation show strong population structure and evidence for in situ divergence. We hypothesize that the observed genetic structure is the result of priority effects. In addition, reduction of habitat size appears to reduce genetic diversity, even at very small spatial scales. Our findings are relevant in the context of ongoing alterations to coastal hydrodynamics, which lead to habitat reduction and influence migration among populations at fine spatial scales.</p>
Data from: Dispersal patterns in a medium-density Irish badger population: implications for understanding the dynamics of tuberculosis transmission.
<p>European badgers (<i>Meles meles</i>) are group-living mustelids implicated in the spread of bovine tuberculosis (TB)<i> </i>to cattle and act as a wildlife reservoir for the disease. In badgers, only a minority of individuals disperse from their natal social group. However, dispersal may be extremely important for the spread of TB, as dispersers could act as hubs for disease transmission. We monitored a population of 139 wild badgers over seven years in a medium-density population (1.8 individuals/ km<sup>2</sup>). GPS-tracking collars were applied to 80 different individuals. Of these, we identified 25 dispersers, 14 of which were wearing collars as they dispersed. This allowed us to record the process of dispersal in much greater detail than ever before. We show that dispersal is an extremely complex process, and measurements of straight-line distance between old and new social groups can severely underestimate how far dispersers travel. Assumptions of straight-line travel can also underestimate direct and indirect interactions and the potential for disease transmission. For example, one female disperser which eventually settled 1.5 km from her natal territory travelled 308 km and passed through 22 different territories during dispersal. Knowledge of badgers'ranging behaviour during dispersal is crucial to understanding the dynamics of TB transmission, and for designing appropriate interventions, such as vaccination.</p>
Data from: Does sex-biased dispersal account for the lack of geographic and host-associated differentiation in introduced populations of an aphid parasitoid?
Host recognition and use in female parasitoids strongly relies on host fidelity, a plastic behavior which can significantly restrict the host preferences of parasitoids, thus reducing the gene flow between parasitoid populations attacking different insect hosts. However, the effect of migrant males on the genetic differentiation of populations has been frequently ignored in parasitoids, despite its known impact on gene flow between populations. Hence, we studied the extent of gene flow mediated by female and male parasitoids by assessing sibship relationships among parasitoids within and between populations, and its impact on geographic and host-associated differentiation in the aphid parasitoid Aphidius ervi. We report evidences of a high gene flow among parasitoid populations on different aphid hosts and geographic locations. The high gene flow among parasitoid populations was found to be largely male mediated, suggested by significant differences in the distribution of full-sib and paternal half-sib dyads of parasitoid populations.
Data from: Phoretic dispersal influences parasite population genetic structure
Dispersal is a fundamental component of the life history of most species. Dispersal influences fitness, population dynamics, gene flow, genetic drift, and population genetic structure. Even small differences in dispersal can alter ecological interactions and trigger an evolutionary cascade. Linking such ecological processes with evolutionary patterns is difficult, but can be done in the proper comparative context. Here we investigate how differences in phoretic dispersal influence the population genetic structure of two different parasites of the same host species. We focus on two species of host-specific feather lice (Phthiraptera: Ischnocera) that co-occur on feral rock pigeons (Columba livia). Although these lice are ecologically very similar, "wing lice" (Columbicola columbae) disperse phoretically by "hitchhiking" on pigeon flies (Diptera: Hippoboscidae), while "body lice" (Campanulotes compar) do not. Differences in the phoretic dispersal of these species are thought to underlie observed differences in host specificity, as well as the degree of host-parasite cospeciation. These ecological and macroevolutionary patterns suggest that body lice should exhibit more genetic differentiation than wing lice. We tested this prediction among lice on individual birds and among lice on birds from three pigeon flocks. We found higher levels of genetic differentiation in body lice compared to wing lice at two spatial scales. Our results indicate that differences in phoretic dispersal can explain microevolutionary differences in population genetic structure and are consistent with macroevolutionary differences in the degree of host-parasite cospeciation.
Patterns of pollen dispersal and mating in a population of the clonal plant Sagittaria latifolia
<p>1) Increased plant size is generally expected to have negative consequences for mating by increasing pollen transfer between flowers of the same plant. Such geitonogamous self-pollination would then reduce sexual fitness through both female and male function. However, recent theoretical work has indicated that when plants grow clonally, the outward expansion of plants caused by clonal growth might have positive effects on siring without substantially increasing rates of self-pollination.</p> <p>2) We investigated patterns of pollen dispersal, selfing, and siring in a monoecious population of the clonal plant <em>Sagittaria latifolia</em>, in which clones varied in size and the extent of intermingling with other clones. A spatially-explicit statistical model based on the inferred pollen-dispersal kernel was constructed to examine the mechanisms underlying observed mating patterns.</p> <p>3) Pollen dispersal typically occurred over distances that exceeded the spatial extent of clones. There was a positive association between clone size (measured as the number of ramets per genet) and the likelihood that clones were intermingled with the shoots of other clones. Together, these patterns of pollen dispersal and clonal intermingling resulted in a weak positive association between clone size and selfing rates and a strong positive association between clone size and outcross siring success. These patterns were replicated in the spatially-explicit model, indicating that the intermingling of clones is an important determinant of mating patterns in this population.</p> <p>4) Synthesis. Our study provides the first examination of the pollen dispersal kernel for a clonal plant. It is the first study providing empirical support for model predictions that potentially negative effects of increased selfing in large clones might be offset by increased siring success. This implies that the negative consequences of becoming large do not necessarily apply to clonal plants.</p>
Data from: genetic evidence of differential dispersal pattern in Asiatic wild dog: comparing populations with different pack size and tiger densities
<p><span>Dispersal is a multi-causal, crucial life-history event in shaping the genetic and behavioral structure of mammals. We assessed the dispersal pattern of dholes aka Asiatic wild dog (<em>Cuon alpinus</em>), a social monogamous mammal at two tiger reserves of Maharashtra with different degrees of pack size and competition with tigers i.e. Tadoba-Andhari (TATR, smaller pack size, higher tiger density) and Nawegaon-Nagzira (NNTR, larger pack size, lower tiger density). We used the microsatellite data of 174 individual genotypes (98 males and 67 females) to assess the dispersal pattern of dholes from two populations with varying pack size, tiger density, and landscape connectivity using gene flow as a proxy. We compared the population structure, pairwise F statistics, assignment index, and relatedness across a spatial scale. Overall, the results suggested a difference in sex-bias dispersal pattern for the two sub-populations, exhibiting significant results for female-biased dispersal in the TATR population with a smaller pack size and higher tiger density. Our study highlights the variability in sex-biased dispersal patterns in two different populations which could be the consequence of different variables such as pack size, tiger density, and geographical scale. The study warrants further quantitative investigation including several factors including individual behavior, pack composition, pack size, tiger density, etc. In the present Anthropocene era, determining the sex bias in dispersal patterns for a short-range, pack-living carnivore will help in devising an effective conservation management plan for their long-term survival.</span></p>
Role of individual dispersal in genetic resilience in fluctuating populations of the gray-sided vole Myodes rufocanus
<p class="a">Population densities of the grey-sided vole <i>Myodes rufocanus</i> fluctuate greatly within and across years in Japan. Here, to investigate the role of individual dispersal in maintaining population genetic diversity, we examined how genetic diversity varied during fluctuations in density by analyzing eight microsatellite loci in voles sampled three times per year for 5 years, using two fixed trapping grids (approximately 0.5 ha each). At each trapping session, all captured voles at each trapping grid were removed. The STRUCTURE program was used to analyze serially collected samples to examine how population crashes were related to temporal variability, based on local-scale genetic compositions in each population. In total, 461 and 527 voles were captured at each trapping grid during this study. The number of voles captured during each trapping session (i.e., vole density) varied considerably at both grids. Although patterns in fluctuations were not synchronized between grids, the peak densities were similar. At both grids, the mean allele number recorded at each trapping session was strongl<span>y</span><span><span>, positively,</span></span><span> a</span>nd non-linearly correlated with density. STRUCTURE analyses revealed that the proportions of cluster compositions among individuals at each grid differed markedly before and after the crash phase, implying the long-distance dispersal of voles from remote areas at periods of low density. The present results suggest that, in grey-sided vole populations, genetic diversity varies with density largely at the local scale; in contrast, genetic variation in a metapopulation is well-preserved at the regional scale due to the density-dependent dispersal behaviors of individuals. By influencing the dispersal patterns of individuals, fluctuations in density affect metapopulation structure spatially and temporally, while the levels of genetic diversity are preserved in a metapopulation.</p>
Reproductive benefits associated with dispersal in headwater populations of Trinidadian guppies (Poecilia reticulata)
<p>Theory suggests that the evolution of dispersal is balanced by its fitness costs and benefits, yet empirical evidence is sparse due to the difficulties of measuring dispersal and fitness in natural populations. Here, we use spatially-explicit data from a multi-generational capture-mark-recapture study of two populations of Trinidadian guppies (<em>Poecilia reticulata</em>) along with pedigrees to test whether there are fitness benefits correlated with dispersal. Combining these ecological and molecular datasets allows us to directly measure the relationship between movement and reproduction. Individual dispersal was measured as the total distance moved by a fish during its lifetime. We analyzed the effects of dispersal propensity and distance on a variety of reproductive metrics. We found that number of mates and number of offspring produced were positively correlated to dispersal, especially for males. Our results also reveal individual and environmental variation in dispersal, with sex, size, season, and stream acting as determining factors. </p>
Population structure, patterns of natal dispersal, and demographic history in a declining aerial insectivore, the purple martin Progne subis
<p>Genetic variation is a fundamental component of biodiversity, and studying population structure, gene flow, and demographic history can help guide conservation strategies for many species. Like other aerial insectivores, the purple martin (<em>Progne subis</em>) is in decline, and yet their genetic background remains largely unknown. To address this knowledge gap, we assessed population structure in the nominate eastern subspecies (<em>P. s. subis</em>) with relation to natal dispersal and examined historical genetic patterns in all three subspecies (<em>P. s. subis, P. s. arboricola, P. s. hesperia</em>) across their North American breeding range by estimating effective population sizes over time. We used next-generation sequencing strategies for genomic analyses, integrating whole-genome resequencing data with continent-wide band encounter records to examine natal dispersal. We documented population structure across <em>P. s. subis</em>, with the highest differentiation between the northern (Alberta) and more southern colonies and following patterns of isolation-by-distance. Consistent with spatial patterns of genetic differentiation, we also found greater longitudinal than latitudinal natal dispersal distances, signifying potential latitudinal constraints on gene flow. Earlier contractions in effective population sizes in the western <em>P. s. arboricola</em> and <em>P. s. hesperia</em> compared to the eastern <em>P. s. subis</em> subspecies suggest these subspecies originated from two different glacial refugia. Together, these findings support latitudinal distinction in <em>P. s. subis</em>, and elucidate the origin of subspecies differentiation, highlighting the importance to conserve populations across the range to maximize genetic diversity and adaptive potential in the purple martin.</p>
Dispersal increases spatial synchrony of populations but has weak effects on population variability: a meta-analysis
<p><span>The effects of dispersal on spatial synchrony and population variability have been well documented in theoretical research, and a growing number of empirical tests have been performed. Yet a synthesis is still lacking. Here, we conducted a meta-analysis of relevant experiments and examined how dispersal affected spatial synchrony and temporal population variability across scales. Our analyses showed that dispersal generally promoted spatial synchrony, and such effects </span><span>increased with dispersal rate and decreased with environmental correlation among patches. The synchronizing effect of dispersal, however, was only detected when spatial synchrony was measured using the correlation-based index, but not for the covariance-based index. In contrast to theoretical predictions, the effect of dispersal on local population variability was generally non-significant, except when environment correlation among patch was negative and/or experimental period was long. At the regional scale, while low dispersal stabilized metapopulation dynamics, high dispersal led to destabilization. </span><span>Overall, the sign and strength of dispersal effects on spatial synchrony and population variability were modulated by taxa, environmental heterogeneity, </span><span><span>type of perturbations, patch number, and experimental length. </span>Our synthesis demonstrates that dispersal can substantially affect the dynamics of spatially distributed populations, but its effects are context dependent on abiotic and biotic factors. </span></p>
Figure 4 in First data on population estimates and dispersal of Montenegrina subcristata - a field study at Virpazar, Montenegro
Figure 4. Sum of individuals counted at each observation date at site A (above) and site B (below).
Conditional natal dispersal provides a mechanism for populations tracking resource pulses after fire
<p>Animals that persist in spatially structured populations face the challenge of tracking the rise and fall of resources across space and time. To combat these challenges, theory predicts that species should use conditional dispersal strategies that allow them to emigrate from patches with declining resources and colonize new resource patches as they appear. We studied natal dispersal movements in the black-backed woodpecker (<i>Picoides arcticus</i>), a species known for its strong association with recent post-fire forests in western North America. We radio-tracked juveniles originating from seven burned areas and tested hypotheses that environmental and individual factors influence dispersal distance and emigration rates – investigating emigration while additionally accounting for imperfect detection with a novel Bayesian model. We found that juveniles were more likely to leave natal areas and disperse longer distances if they were heavier or hatched in older burned areas where resources are increasingly scarce. Juveniles were also more likely to leave their natal burn if they hatched in a nest closer to the fire perimeter. While dispersing across the landscape, black-backed woodpeckers selected for burned forest relative to unburned available habitat. Together, these results strongly support the hypothesis that black-backed woodpecker populations track resource pulses across fire-prone landscapes, with conditional natal dispersal acting as a mechanism for locating and colonizing newly burned areas. Lending empirical support to theoretical predictions, our findings suggest that changes in resource distribution may shape dispersal patterns and, consequently, the distribution and persistence of spatially structured populations. </p>
Population assignment tests uncover rare long-distance larval dispersal events
<p>Long-distance dispersal (LDD) is consequential to metapopulation ecology and evolution. In systems where dispersal is undertaken by small propagules, such as larvae in the ocean, documenting LDD is especially challenging. Genetic parentage analysis has gained traction as a method for measuring larval dispersal, but such studies are generally spatially limited, leaving LDD understudied in marine species. We addressed this knowledge gap by uncovering LDD with population assignment tests in the coral reef fish <i>Elacatinus lori</i>—a species whose short-distance dispersal has been well-characterized by parentage analysis. When adults (<i>n</i> = 931) collected throughout the species' range were categorized into three source populations, assignment accuracy exceeded 99%, demonstrating low rates of connectivity between populations in the adult generation. After establishing high assignment confidence, we assigned settlers (<i>n</i> = 3,828) to source populations. Within the settler cohort, < 0.1% of individuals were identified as long-distance dispersers from other populations. These results demonstrate an exceptionally low level of connectivity between <i>E. lori</i> populations, despite the potential for ocean currents to facilitate LDD. More broadly, these findings illustrate the value of combining genetic parentage analysis and population assignment tests to uncover short- and long-distance dispersal, respectively.</p>
Biophysical larval dispersal models of observed bonefish (Albula vulpes) spawning events in Abaco, The Bahamas: An assessment of population connectivity and ocean dynamics
<p>Biophysical models are a powerful tool for assessing population connectivity of marine organisms that broadcast spawn. <em>Albula</em> <em>vulpes</em> is a species of bonefish that is an economically and culturally important sportfish found throughout the Caribbean and that exhibits genetic connectivity among geographically distant populations. We created ontogenetically relevant biophysical models for bonefish larval dispersal based upon multiple observed spawning events in Abaco, The Bahamas in 2013, 2018, and 2019. Biological parameterizations were informed through active acoustic telemetry, CTD casts, captive larval rearing, and field collections of related albulids and anguillids. Ocean conditions were derived from the Regional Navy Coastal Ocean Model American Seas dataset. Each spawning event was simulated 100 times using the program Ichthyop. Ten thousand particles were released at observed and putative spawning locations and were allowed to disperse for the full 71-day pelagic larval duration for <em>A</em>. <em>vulpes</em>. Settlement densities in defined settlement zones were assessed along with interactions with oceanographic features. The prevailing Northern dispersal paradigm exhibited strong connectivity with Grand Bahama, the Berry Islands, Andros, and self-recruitment to lower and upper Abaco. Ephemeral gyres and flow direction within Northwest and Northeast Providence Channels were shown to have important roles in larval retention to the Bahamian Archipelago. Larval development environments for larvae settling upon different islands showed few differences and dispersal was closely associated with the thermocline. Settlement patterns informed the suggestion for expansion of conservation parks in Grand Bahama, Abaco, and Andros, and the creation of a park in Eleuthera and the Berry Islands to protect fisheries. Further observation of spawning events and the creation of biophysical models will help to maximize protection for bonefish spawning locations and nursery habitat, and may help to predict year-class strength for bonefish stocks throughout the Greater Caribbean.</p>
Data for: The central Alps comprise a major dispersal barrier between western and eastern populations of two butterfly species
<p><strong>Aim:</strong> Environmental and species-specific factors shape spatial patterns in genetic diversity and population structure. Comparing different species within the same area helps to disentangle more general from species-specific factors affecting such geographic patterns. Here, we examined genetic diversity and population structuring through geographic features in two alpine butterfly species.</p> <p><strong>Location:</strong> European Alps.</p> <p><strong>Taxon:</strong> Copper butterflies (<em>Lycaena</em> spp.).</p> <p><strong>Methods:</strong> We sampled 21 <em>Lycaena hippothoe</em> and 14 <em>L. virgaureae</em> populations with 18 individuals per population. We analysed the genetic diversity and structure<a> </a>of these populations by using 14 and nine microsatellite markers for <em>L. hippothoe</em> and <em>L. virgaureae</em> , respectively.</p> <p><strong>Results:</strong> We found higher number of alleles, allelic richness, observed heterozygosity, F<sub>ST</sub> values and more genetic clusters in <em>L. hippothoe</em> than in <em>L. virgaureae</em>. Both species displayed a major genetic barrier in the central Alps. Western and eastern <em>L. hippothoe</em> populations but central <em>L. virgaureae</em> populations showed the highest genetic diversity.</p> <p><strong>Main Conclusions:</strong> The population genetic structures of both Copper butterflies seemed to be strongly affected by population history and demography. Patterns indicate for both species a western and an eastern glacial refuge. The high genetic diversity and pronounced population structure found in <em>L. hippothoe</em> seems to be related to a low dispersal ability and closed populations with high local abundances as opposed to <em>L. virgaureae</em>. The higher dispersal of the latter likely caused hybridisation in the central alpine contact zone boosting genetic diversity, which was not the case in <em>L. hippothoe</em>. These findings suggest that different conservation strategies are needed for these closely related species.</p>
Figure 2 in Expanding Population Edge Craniometrics and Genetics Provide Insights into Dispersal of Commensal Rats through Nusa Tenggara, Indonesia
Figure 2. Sampling locations for skulls included in the craniometric analysis.
Density dependence of seed dispersal and fecundity profoundly alters the spread dynamics of plant populations
<ol> <li>Plant population spread has fundamental ecological and evolutionary importance. Both determinants of plant population spread, fecundity and dispersal, can be density-dependent, which should cause feedback between population densities and spread dynamics. Yet it is poorly understood how density-dependence affects key characteristics of spread: spread rate at which the location of the furthest forward individual moves, edge depth (the geographical area over which individuals contribute to spread) and population continuity (occupancy of the spreading population).</li> <li>We present a general modelling framework for analysing the effects of density-dependent fecundity and dispersal on population spread and parameterize this framework with experimental data from a common-garden experiment using five wind-dispersed plant species grown at different densities. </li> <li>Our model shows that density-dependent fecundity and dispersal strongly affect all three population spread characteristics for both exponential and lognormal dispersal kernels. Spread rate and edge depth are strongly correlated but show weaker correlations with population continuity. Positive density-dependence of fecundity increases all three spread characteristics. Increasingly positive density-dependence of dispersal increases spread rate and edge depth but generally decreases population continuity. Density-dependent fecundity and dispersal are largely additive in their effect on spread characteristics. For population continuity, the joint effects of density-dependent fecundity and dispersal are somewhat contingent on the dispersal kernel.</li> <li>The common-garden experiment and the experimentally parameterized mechanistic dispersal model revealed density-dependent fecundity and dispersal across study species. All study species exhibited negative density-dependent fecundity, but they differed qualitatively in the density-dependence of dispersal distance and probability of long-distance dispersal. The negative density-dependence of fecundity and dispersal found for three species reinforced each other in reducing spread rate and edge depth. The positively density-dependent dispersal found for two species markedly increased spread rate and edge depth. Population continuity was hardly affected by population density in all study species except Crepis sancta in which it was strongly reduced by negatively density-dependent fecundity.</li> <li> <em>Synthesis</em>. Density-dependent fecundity and seed dispersal profoundly alter population spread. In particular, positively density-dependent dispersal should promote the spread and genetic diversity of plant populations migrating under climate change but also complicate the control of invasive species.</li> </ol>
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Allen Brain Atlas
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