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Fig. 3 in Comparison of the modified agglutination test and real-time PCR for detection of Toxoplasma gondii exposure in feral cats from Phillip Island, Australia, and risk factors associated with infection
Fig. 3. Predicted lines of fit for the multivariable logistic regression model plotted as probability of Toxoplasma gondii qPCR positivity in feral cats on Phillip Island (Victoria) versus body weight for each season. Dashed lines show 95% confidence intervals.
Fig. 1 in Comparison of the modified agglutination test and real-time PCR for detection of Toxoplasma gondii exposure in feral cats from Phillip Island, Australia, and risk factors associated with infection
Fig. 1. Location and Toxoplasma gondii infection status, as detected by real-time PCR (qPCR), of feral cats trapped on Phillip Island (Victoria) from July 2016 to December 2017. Map shows the distribution of different location types (Park, Agricultural, Residential) used in multivariable regression analysis. A circular spread of points around a location marked with 'x' indicates multiple animals were sampled at the same site (i.e. same GPS coordinates). Red = T. gondii qPCR positive, white = T. gondii qPCR negative. Map created using Quantum GIS, version 3.8. (For interpretation of the references to colour in this figure legend, the reader is referred to the Web version of this article.)
Fig. 2 in Predicting the risk of Alaria alata infestation in wild boar on the basis of environmental factors
Fig. 2. The prevalence of A. alata in wild boar in provinces in Poland calculated from literature values and data from the present study (A) and predicted by percentage of areas covered by WETLANDS (B) (for detailed information, see: Methods). The figure shows prevalence values for a given province and confidence intervals (lower; upper).
Fig. 1 in Sero-prevalence and risk factors of Toxoplasma gondii infection in wild cervids in Denmark
Fig. 1. The geographical distribution of wild cervids included in the study and the number of animals tested positive for antibodies against Toxoplasma gondii in the hunting season 2017–2018 in Denmark (n = 428). Shown by region and proportion of species sampled (roe deer, fallow deer or red deer) in each region. Pie charts indicate proportion of samples from each cervid species. Note Sika deer was only sampled in Mid-Jutland (n = 14), and hence not included in the map. (For interpretation of the references to colour in this figure legend, the reader is referred to the Web version of this article.)
Figure 1 in Molecular characterization of Giardia lamblia and risk factors for giardiasis among immunocompromised patients in southern Brazil
Figure 1. Similarity between sequences of the gdh gene of isolates from G. lamblia in immunocompromised patients in southern Brazil (P01 to P18) and sequences of the parasite found in Brazil and stored in the GenBank, by the Neighbor-Joining (NJ) method with 1000-replicate bootstrap (A) and by the Maximum Likelihood (ML) method with 1000-replicate bootstrap (B). Bootstrap values below 50 were omitted.
Figure 2 in Molecular characterization of Giardia lamblia and risk factors for giardiasis among immunocompromised patients in southern Brazil
Figure 2. Similarity between sequences of the gdh gene of isolates from G. lamblia in immunocompromised patients in southern Brazil (P01 to P18) and sequences of the parasite in different countries and stored in the GenBank, by the Neighbor-Joining (NJ) method with 1000-replicate bootstrap (A) and by the Maximum Likelihood (ML) method with 1000-replicate bootstrap (B). Bootstrap values below 50 were omitted.
Risk factors for treatment failure in women with uncomplicated lower urinary tract infection
<p><strong>Origin :</strong></p> <p>This dataset represent a sub-population of a previous clinical trial. </p> <blockquote> <p><a href="https://pubmed.ncbi.nlm.nih.gov/29710295/">Huttner A, Kowalczyk A, Harbarth S, et al.. Effect of 5-Day Nitrofurantoin vs Single-Dose Fosfomycin on Clinical Resolution of Uncomplicated Lower Urinary Tract Infection in Women: A Randomized Clinical Trial. JAMA. 2018;319(17):1781-1789. DOI: 10.1001/jama.2018.3627.</a></p> </blockquote> <p> </p> <p><strong>Databases : </strong></p> <ul> <li>1st database : women included in the nested cohort study (n=350)</li> <li>2nd database : women with microbiologically conformed UTI (n=279)</li> <li>3d database : women with <em>E.coli</em> related UTI (n=185)</li> </ul> <p><strong>Important : </strong></p> <ul> <li>Data from Tel Aviv have been removed from this dataset, and might be shared by the corresponding author upon reasonable request at the following address (romainmartischang@gmail.com).</li> </ul> <p><strong>Codebook : </strong></p> <ul> <li>v1_XXX; 0/1 : All symptoms present at baseline</li> <li>v1dipstick : Negative (0), nitrites (1), leukocytes esterase (2), both (3), not done (4)</li> <li>centre : recruitment centre (CHE or POL)</li> <li>rfscore : risk factor for carrying a resistant bacteria as defined in the initial trial</li> <li>treatment : nitrofurantoin (0) vs fosfomycin (1)</li> <li>dm : diabetes mellitus </li> <li>case2 : bacteriological failure at 28 days as defined in the initial trial</li> <li>case1 : clinical failure at 28 days as defined in the initial trial</li> <li>recur14 : bacteriological failure at 14 days as defined in the initial trial</li> <li>fail14 : clinical failure at 14 days as defined in the initial trial</li> <li>v1pathogen[1-3] : pathogen present at baseline</li> </ul>
Psychological Well-being, Food Insecurity, Academic Performance, and Other Risk Factors in a Sample of College Students in Jordan during Covid-19
<p>This research investigated the occurrence of psychological well-being perception and its relationship with food insecurity, academic performance, and other correlates in a sample of university students in Amman, Jordan during Covid-19. A cross-sectional study was conducted in two phases. Phase-1 translated and validated an Arabic version of the Psychological General Wellbeing Index-Short version (PGWB-S) in 122 students from the University of Jordan. In Phase-2, 414 students completed demographic questionnaire, Arabic Versions of the PGWB-S, Ryff Psychological Wellbeing Scale, and Individual Food Insecurity Experience Scale.</p> <p>Ethical considerations: This manuscript has been read and approved by all authors. The authors confirm that there are no other persons, who satisfied the criteria for authorship, but are not listed. The order of authors listed in the manuscript has been approved by all of them. They also understand that the Corresponding Author is the sole contact for the Editorial process, and holds the responsibility for communicating with the other author about progress, submissions of revisions and final approval of proofs. Moreover, the authors declare that this manuscript is original, has not been published before, and is not currently being considered for publication elsewhere. Furthermore, all data used in the study is confidential and the lead author has full access to the data reported in the manuscript. We confirm that there are no known conflicts of interest associated with this publication, which did not receive any financial support. Finally, the reporting of this work is compliant with The Code of Ethics of the World Medical Association (Declaration of Helsinki). In addition to that, the protocol of this research is approved by the Institutional Review Board at the University of Jordan, Amman, Jordan (ref no.: 2021-89).</p>
Risk Factors that modify the familial aggregation for ischemic cardiovascular illness
<p><strong>Introduction:</strong> Ischemic cardiovascular disease is a global health problem. <strong>Objective:</strong> To determine the risk factors that modified the familial aggregation for ischemic cardiovascular disease in affected individuals. <strong>Material and Methods:</strong> An observational, analytical, longitudinal and retrospective case/control study was carried out from the population of the Banes municipality, Holguín province during May 2020-May 2022. The universe included all the diagnosed individuals and their families. By simple random sampling, the sample (149 cases) was obtained and the control group was formed at a ratio of 3:1 (447 individuals with no history of disease). The bioethical requirements were met. Inclusion/exclusion criteria were applied. The statistics were used: Chi square, Odd Ratio (OR), including p and confidence interval. The variables were operationalized: age, degree of consanguinity and risk factors. The family tree was obtained. <strong>Results:</strong> The relatives of first and second degree of consanguinity showed the highest incidence of disease. The age group 60-69 years was more affected. Familial aggregation for the disease was demonstrated (X<sup>2</sup>=45.93 OR=5.85 99.9% CI (3.29; 10.41)). Ischemic cardiomyopathy (43.3%) and arrhythmias (20.7%) were notable forms of presentation. The risk factors showed an association for the disease (X<sup>2</sup>=67.11 p ≤0.001). Arterial hypertension (X<sup>2</sup>=57.9 OR=3.04 99.9% CI (2.27; 4.06)) and smoking (X<sup>2</sup>=45.7 OR=2.66 99.9% CI (2.3 ; 5,6)) expressed a highly significant association for ischemic cardiovascular disease. <strong>Conclusions:</strong> The risk factors: arterial hypertension, smoking and family history modified the family aggregation for ischemic cardiovascular disease.</p>
Questionnaire: Co-occurrence of behavioural risk factors for non-communicable diseases among 40-year and above aged community members in three regions of Myanmar
<p>This questionnaire was applied as data collection tool for the dataset of "Co-occurrence of behavioural risk factors for non-communicable diseases among 40-year and above aged community members in three regions of Myanmar".</p>
Etiology, persistence, and risk factors of subclinical mastitis in a meat-producing sheep flock
Open the record for dataset details and reuse information.
Data and R code from: Spatiotemporal risk factors predict landscape-scale survivorship for a northern ungulate
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Staphylococcus aureus VCF files: Risk Factors for Recurrent Staphylococcus aureus Bacteremia
<p>Background: To understand the clinical, bacterial, and host characteristics associated with recurrent Staphylococcus aureus bacteremia (R-SAB), patients with R-SAB were compared to contemporaneous patients with a single episode of SAB (S-SAB).<br> Methods: All SAB isolates underwent spa genotyping. All isolates from R-SAB patients underwent Pulsed-Field Gel Electrophoresis (PFGE). PFGE-indistinguishable pairs from 40 patients underwent whole genome sequencing (WGS). Acute phase plasma from R-SAB and S-SAB patients was matched 1:1 for age, race, gender, and bacterial genotype and underwent cytokine quantification using 25-analyte multiplex bead array. Results: R-SAB occurred in 69 (9.1%) of the 756 study patients. Of the 69 patients, 30 experienced relapse (43.5%) and 39 reinfection (56.5%). Age, race, hemodialysis dependence, presence of foreign body, MRSA, and persistent bacteremia were individually associated with likelihood of recurrence. Multivariate risk modeling revealed that African American (AA) hemodialysis patients were nearly two times more likely (OR = 9.652 [5.402 – 17.418]) than White hemodialysis patients (OR = 4.53 [1.696 – 10.879]) to experience R-SAB. WGS confirmed PFGE interpretations in all cases. Median RANTES levels in acute phase plasma from the initial episode of SAB were higher in R-SAB than in matched S-SAB controls ( P = 0.0053, False Discovery Rate < 0.10). <br> Conclusion: This study identified several risk factors for R-SAB. The largest risk for R-SAB is among AA hemodialysis patients. Higher RANTES levels in R-SAB compared to<br> matched controls warrants further study.</p>
Knowledge and perceptions of risk factors for maternal mortality among postnatal mothers in Hohoe Municipality of Volta Region, Ghana
<p>This de-identified limited dataset from which the manuscript if spread. It dataset from primary research conducted to assess knowledge of postnatal mothers about clinical risk factors and perceptions about socio-cultural and health system-related factors affecting maternal mortality.</p>
Risk factors for non-communicable diseases in Bangladesh: Findings of the population-based cross-sectional national survey 2018
<p><span><strong><span>Objectives:</span></strong> To determine the national prevalence of risk factors of non-communicable diseases (NCD) in the adult population of Bangladesh. </span></p> <p><span><strong><span>Design: The study was a </span></strong>population-based national cross-sectional study.</span></p> <p><span><strong><span>Setting:</span></strong> This study used 496 primary sampling units (PSUs) developed by the Bangladesh Bureau of Statistics. The PSUs were equally allocated to each division and urban and rural stratum within each division.</span></p> <p><span><strong><span>Participants:</span></strong> The participants were adults aged 18-69 years, who were usual residents of the households for at least six months, and stayed the night before the survey. Out of 9900 participants, 8185 (82.7%) completed STEP-1 and STEP-2, and 7208 took part in STEP-3. </span></p> <p><span><b>Primary and secondary outcome:</b> The prevalence of behavioral, physical, and biochemical risk factors of NCD. Data were weighted to generate national estimates.</span></p> <p><strong>Results: </strong>Tobacco use was significantly (p<0.05) higher in the rural (45.2%) than the urban (38.8%) population. Inadequate fruit/vegetable intake was significantly (P<0.05) higher in the urban (92.1%) than in the rural (88.9%) population. The mean salt intake per day was higher in the rural (9.0 gm) than urban (8.9 gm) population. Among all, 3.0% had no, 70.9% had 1-2, and 26.2% had ≥3 NCD risk factors. The urban population was more likely to have insufficient physical activity (AOR: 1.2, 95% CI: 1.2–1.2), obesity (AOR: 1.5, 95% CI: 1.5–1.5), hypertension (AOR: 1.3, 95% CI: 1.3–1.3), diabetes (AOR: 1.6, 95% CI: 1.6–1.6), and hyperglycemia (AOR: 1.1, 95% CI: 1.1–1.1).</p> <p><strong>Conclusions: </strong>Considering the high prevalence of the behavioral, physical, and biochemical risk factors, diverse population and high-risk group targeted interventions are essential to combat the rising burden of NCDs. </p>
Data from: Profile of and risk factors for post-stroke cognitive impairment in diverse ethno-regional groups
OBJECTIVE: To address the variability in prevalence estimates and inconsistencies in potential risk factors for post-stroke cognitive impairment (PSCI) using a standardised approach and individual participant data (IPD) from international cohorts in the STROKOG consortium. METHODS: We harmonised data from thirteen studies based in eight countries. Neuropsychological test scores 2 to 6 months after stroke or TIA and appropriate normative data were used to calculate standardised cognitive domain scores. Domain-specific impairment was based on percentile cut-offs from normative groups, and associations between domain scores and risk factors were examined using one-stage IPD meta-analysis. RESULTS: In a combined sample of 3,146 participants admitted to hospital for stroke (97%) or TIA (3%), 44% were impaired in global cognition and 30–35% in individual domains 2 to 6 months after the index event. Diabetes and a history of past stroke were strongly associated with poorer cognitive function after covariate adjustments; hypertension, smoking and atrial fibrillation had weaker domain-specific associations. While there were no significant differences in domain impairment among ethno-racial groups, some inter-ethnic differences were found in the effects of risk factors on cognition. CONCLUSIONS: This paper confirms the high prevalence of PSCI in diverse populations, highlights common risk factors, in particular diabetes, and points to ethno-racial differences which warrant attention in the development of prevention strategies.
Risk factors for cardiovascular disease (CVD) in adults with type 1 diabetes: findings from prospective real-life T1D exchange registry
<p>Context</p> <p>Cardiovascular disease (CVD) is a major cause of mortality in adults with type 1 diabetes.</p> <p>Objective</p> <p>We prospectively evaluated CVD risk factors in a large, contemporary cohort of adults with type 1 diabetes living in the United States.</p> <p>Design</p> <p>Observational study of CVD and CVD risk factors over a median of 5.3 years.</p> <p>Setting</p> <p>The T1D Exchange clinic network.</p> <p>Patients</p> <p>Adults (age ≥18 years) with type 1 diabetes and without known CVD diagnosed before or at enrollment.</p> <p>Main Outcome Measure</p> <p>Associations between CVD risk factors and incident CVD were assessed by multivariable logistic regression.</p> <p>Results</p> <p>The study included 8,727 participants (53% female, 88% non-Hispanic white, median age 33 years [IQR=21, 48], type 1 diabetes duration 16 years [IQR=9, 26]). At enrollment, median HbA1c was 7.6% (66 mmol/mol) [IQR=6.9 (52), 8.6 (70)], 33% used a statin, and 37% used blood pressure medication. Over a mean follow-up of 4.6 years, 325 (3.7%) participants developed incident CVD. Ischemic heart disease was the most common CVD event. Increasing age, BMI, HbA1c, presence of hypertension and dyslipidemia, increasing duration of diabetes, and diabetic nephropathy were associated with increased risk for CVD. There were no significant gender differences in CVD risk.</p> <p>Conclusion</p> <p>HbA1c, hypertension, dyslipidemia and diabetic nephropathy are important risk factors for CVD in adults with type 1 diabetes. A longer follow-up is likely required to assess the impact of other traditional CVD risk factors on incident CVD in the current era.</p>
Dataset Case-control study: Risk factors for sporadic non-pregnancy related listeriosis in Germany, 2012-2013
<p>The dataset contains data of a nationwide age-frequency matched case-control study in Germany, 2012-2013, which was performed to identify underlying conditions and foods asscociated with sporadic listeriosis. It covers anonymous sociodemografic information, information on underlying conditions, and >60 food items. Data for control subjects were obtained from a population-based random telephone sample, which was generated according to the method by Gabler and Häder and considered telephone numbers not registered in telephone books.</p>
Risk factors of typhoid infection in the Indonesian archipelago
<p>Datasets and accompanying questionnaires for the epidemiological study on risk factors for typhoid infection conducted between June 2010 and June 2011 from 14 selected hospitals and health centres in three Indonesian islands: in and around Makassar in South Sulawesi (Sulawesi); Jayapura (Papua); Samarinda in East-Kalimantan (Kalimantan).</p> <p>The mansucript describing methods and results has been accepted for publication in PLOS ONE "Risk factors of typhoid infection in the Indonesian archipelago" by Sandra Alba, Mirjam I Bakker, Mochammad Hatta, Pauline FD Scheelbeek, Ressy Dwiyanti<sup> </sup>, Romi Usman, Andi R Sultan, Muhammad Sabir, Nataniel Tandirogan, Masyhudi Amir, Yadi Yasir, Rob Pastoor, Stella van Beers,Henk L Smits</p>
Replication data for Anterior Cruciate Ligament Injury: identifying information sources and risk factor awareness among the general population
<p>Creating awareness about a disorder is important for prevention from the perspective of public health. However, for sports injuries, like the anterior cruciate ligament (ACL) injury, there is no study which has investigated the awareness of risk factors for the injury and prevention methods among the general population, to the best of our knowledge. The sources of information among the population are also unclear. The purpose of present study was to identify these aspects of public awareness about the ACL injury.</p> <p>A questionnaire was randomly distributed among the general population registered with a web based questionnaire supplier, to recruit 900 participants who were aware about the ACL injury. The questionnaire consisted of two parts: Question 1 asked them about their sources of information regarding the ACL injury; Question 2 asked them about the risk factors for ACL injury. Multivariate logistic regression was used to determine the information sources that provide a good understanding of the risk factors.</p> <p>The leading source of information for ACL injury was television (57.0%). However, the results of logistic regression analysis revealed that television was not an effective medium to create awareness about the risk factors, among the general population. Instead “Lecture by a coach”, “Classroom session on Health”, and “Newspaper” were significantly effective in creating a good awareness of the risk factors (p < 0.001).</p>
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.