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91 results for “single-nucleus RNA sequencing”

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geo24/100

Bulk and single-nucleus RNA sequencing highlight immune pathways induced in individuals during an Ixodes scapularis tick bite [RNA-Seq]

GEO Series GSE245507. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2023View details →
geo24/100

A single-nucleus RNA-sequencing pipeline to decipher the molecular anatomy and pathophysiology of human kidneys

GEO Series GSE121862. Homo sapiens. 47 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2019View details →
geo24/100

Single-nucleus RNA sequencing analysis of normal-appearing brains from RRMS and SPMS patients

GEO Series GSE179590. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2022View details →
geo24/100

Characterization of human mosaic Rett syndrome brain tissue by single-nucleus RNA sequencing (Single-cell or single-nuclei RNA sequencing)

GEO Series GSE113901. Homo sapiens; Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2018View details →
geo24/100

Single-nucleus RNA Sequencing Reveals GABAergic Vulnerability and Reactive Gliosis Driven by Loss of TDP-43

GEO Series GSE309401. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2025View details →
geo24/100

Single-Cell, Single-Nucleus and Spatial RNA Sequencing of the Human Liver Identifies Hepatic Stellate Cell and Cholangiocyte Heterogeneity

GEO Series GSE185477. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2021View details →
geo24/100

Defining specific cell states of MPTP-induced Parkinson's disease by single-nucleus RNA sequencing

GEO Series GSE205367. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2022View details →
geo24/100

A survey of the mouse hindbrain in the fed and fasted state using single-nucleus RNA sequencing.

GEO Series GSE168737. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2021View details →
geo24/100

Dynamic transcriptional responses to injury of regenerative and non-regenerative cardiomyocytes revealed by single-nucleus RNA sequencing

GEO Series GSE142366. Rattus norvegicus; Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenMar 2020View details →
geo24/100

Spatial transcriptomics and single-nucleus RNA-sequencing reveal a transcriptomic atlas of human spinal cord [DRG Spatial]

GEO Series GSE243073. Homo sapiens. 7 samples. Type: Other.

openGEO-OpenJan 2024View details →
geo24/100

Single-nucleus RNA sequencing revealed the impact of post-mortem interval on the cellular component and gene expression analysis of mouse brains

GEO Series GSE285936. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2025View details →
geo24/100

Comparative analysis of single-cell and single-nucleus RNA-sequencing in a rabbit model of retinal detachment-related proliferative vitreoretinopathy

GEO Series GSE217333. Oryctolagus cuniculus. 10 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2022View details →
geo24/100

Dissociation Protocols used for Sarcoma Tissues Bias the Transcriptome observed in Single-cell and Single-nucleus RNA sequencing.

GEO Series GSE200529. Homo sapiens. 26 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2023View details →
geo24/100

Unraveling the Role of Srsf1 in Brown Adipose Tissue Thermogenic Function through Single-Nucleus RNA Sequencing.

GEO Series GSE238009. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2024View details →
geo24/100

A Simplified Preparation Method for Single-Nucleus RNA-Sequencing Using Long-Term Frozen Brain Tumor Tissues

GEO Series GSE268496. Homo sapiens; Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2025View details →
geo24/100

Benchmarking of Computational Demultiplexing Methods for Single-Nucleus RNA Sequencing Data [dataset 2]

GEO Series GSE298266. Homo sapiens; Ovis aries. 10 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2025View details →
geo24/100

Single-nucleus RNA sequencing of OCTN2-defective engineered heart tissues and isogenic control

GEO Series GSE211650. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2022View details →
geo24/100

Single-nucleus RNA sequencing of human subcutaneous adipose tissue biopsies from 16 Finnish participants.

GEO Series GSE236708. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2023View details →
geo24/100

Using single-nucleus RNA-sequencing to interrogate transcriptomic profiles of archived human pancreatic islets

GEO Series GSE150212. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2021View details →
geo24/100

Single-nucleus RNA sequencing of deep and superficial sublayers of hippocampal area CA1 in epilepsy

GEO Series GSE143560. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2021View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

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