Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
188
datasets available to search
ShareScore release 0.7.1
Dataset results
188 results for “swine”
Laboratory data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - Estonia
<p>This dataset contains ASF laboratory analytical results in domestic pigs and wild boar.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2024_EE - Estonian Veterinary and Food Laboratory (VFL)</li> <li>ASF2023_EE - Estonian Veterinary and Food Laboratory (VFL)</li> <li>ASF2022_EE - Estonian Veterinary and Food Laboratory (VFL)*</li> <li>ASF2022_EE - Estonian Veterinary and Food Laboratory (VFL)</li> </ul> <p> </p> <p> </p> <p>*This version of the ASF laboratory data has been republished with the subunit identification code (sampUnitIds.subUnitId) column empty due to data protection reasons</p>
Laboratory data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - Latvia
<p>This dataset contains ASF laboratory analytical results in domestic pigs and wild boar.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2024_LV - Institute of Food Safety, Animal Health and Environment (BIOR)</li> <li>ASF2023_LV - Institute of Food Safety, Animal Health and Environment (BIOR)</li> <li>ASF2022_LV - Institute of Food Safety, Animal Health and Environment (BIOR)*</li> <li>ASF2022_LV - Institute of Food Safety, Animal Health and Environment (BIOR)</li> </ul> <p> </p> <p> </p> <p>*This version of the ASF laboratory data has been republished with the subunit identification code (sampUnitIds.subUnitId) column empty due to data protection reasons</p>
Laboratory data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - Hungary
<p>This dataset contains ASF laboratory analytical results in wild boar.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2024_HU - National Food Chain Safety Office (NFCSO)</li> <li>ASF2023_HU - National Food Chain Safety Office (NFCSO)</li> <li>ASF2022_HU - National Food Chain Safety Office (NFCSO)*</li> <li>ASF2022_HU - National Food Chain Safety Office (NFCSO)</li> </ul> <p> </p> <p> </p> <p>*This version of the ASF laboratory data has been republished with the subunit identification code (sampUnitIds.subUnitId) column empty due to data protection reasons</p>
Laboratory data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - Poland
<p>This dataset contains ASF laboratory analytical results in domestic pigs and wild boar.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2024_PL - National Veterinary Research Institute (PIWET-PIB)</li> <li>ASF2023_PL - National Veterinary Research Institute (PIWET-PIB)</li> <li>ASF2022_PL - National Veterinary Research Institute (PIWET-PIB)*</li> <li>ASF2022_PL - National Veterinary Research Institute (PIWET-PIB)</li> </ul> <p> </p> <p> </p> <div> <p>*This version of the ASF laboratory data has been republished with the subunit identification code (sampUnitIds.subUnitId) column empty due to data protection reasons</p> <p> </p> </div>
Laboratory data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - Sweden
<p>This dataset contains ASF laboratory analytical results in domestic pigs and wild boar.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2024_SE - National Veterinary Institute</li> <li>ASF2023_SE - National Veterinary Institute</li> </ul>
Laboratory data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - Italy
<p>This dataset contains ASF laboratory analytical results in domestic pigs and wild boar.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2024_IT - Istituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise (IZSAM)</li> <li>ASF2023_IT - Istituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise (IZSAM)</li> <li>ASF2022_IT - Istituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise (IZSAM)*</li> <li>ASF2022_IT - Istituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise (IZSAM)</li> </ul> <p> </p> <p> </p> <p>*This version of the ASF laboratory data has been republished with the subunit identification code (sampUnitIds.subUnitId) column empty due to data protection reasons</p>
Pig population data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - Romania
<p>This dataset contains swine population data.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2024_POP_EXTRACTION_RO - National Sanitary Veterinary and Food Safety Authority (ANSVSA)</li> <li>ASF2023_POP_EXTRACTION_RO - National Sanitary Veterinary and Food Safety Authority (ANSVSA)</li> <li>ASF2022_POP_EXTRACTION_RO - National Sanitary Veterinary and Food Safety Authority (ANSVSA)*</li> <li>ASF2022_POP_EXTRACTION_RO - National Sanitary Veterinary and Food Safety Authority (ANSVSA)</li> </ul> <p> </p> <p>*This version of the animal population data has been republished with the establishment and subnit identification code (estabId, subUnitId) columns empty due to data protection reasons</p>
Pig population data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - North Macedonia
<p>This dataset contains swine population data.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2024_POP_EXTRACTION_MK - Food and Veterinary Agency (FVA)</li> <li>ASF2023_POP_EXTRACTION_MK - Food and Veterinary Agency (FVA)</li> <li>ASF2022_POP_EXTRACTION_MK - Food and Veterinary Agency (FVA)*</li> <li>ASF2022_POP_EXTRACTION_MK - Food and Veterinary Agency (FVA)</li> </ul> <p> </p> <p> </p> <p>*This version of the animal population data has been republished with the establishment and subnit identification code (estabId, subUnitId) columns empty due to data protection reasons</p> <p> </p>
Pig population data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - Greece
<p>This dataset contains swine population data.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2024_POP_EXTRACTION_GR - Hellenic Ministry of Rural Development and Food (MINAGRIC)</li> <li>ASF2023_POP_EXTRACTION_GR - Hellenic Ministry of Rural Development and Food (MINAGRIC)</li> </ul>
Pig population data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - Poland
<p>This dataset contains swine population data.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2024_POP_EXTRACTION_PL - Agency for Restructuring and Modernisation of Agriculture (ARMA)</li> <li>ASF2023_POP_EXTRACTION_PL - Agency for Restructuring and Modernisation of Agriculture (ARMA)</li> <li>ASF2022_POP_EXTRACTION_PL - Agency for Restructuring and Modernisation of Agriculture (ARMA)*</li> <li>ASF2022_POP_EXTRACTION_PL - Agency for Restructuring and Modernisation of Agriculture (ARMA)</li> </ul> <p> </p> <p> </p> <p>*This version of the animal population data has been republished with the establishment and subnit identification code (estabId, subUnitId) columns empty due to data protection reasons</p>
Laboratory data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - Germany
<p>This dataset contains ASF laboratory analytical results in wild boar.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2024_DE - Federal Research Institute for Animal Health, Friedrich-Loeffler-Institute (FLI)</li> <li>ASF2023_DE - Federal Research Institute for Animal Health, Friedrich-Loeffler-Institute (FLI)</li> <li>ASF2022_DE - Federal Research Institute for Animal Health, Friedrich-Loeffler-Institute (FLI)*</li> <li>ASF2022_DE - Federal Research Institute for Animal Health, Friedrich-Loeffler-Institute (FLI)</li> </ul> <p> </p> <p> </p> <p>*This version of the ASF laboratory data has been republished with the subunit identification code (sampUnitIds.subUnitId) column empty due to data protection reasons</p>
Pig population data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - Czechia
<p>This dataset contains swine population data.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2024_POP_EXTRACTION_CZ - State Veterinary Administration (SVA)</li> <li>ASF2023_POP_EXTRACTION_CZ - State Veterinary Administration (SVA)</li> <li>ASF2022_POP_EXTRACTION_CZ - State Veterinary Administration (SVA)*</li> <li>ASF2022_POP_EXTRACTION_CZ - State Veterinary Administration (SVA)</li> </ul> <p> </p> <p> </p> <p>*This version of the animal population data has been republished with the establishment and subnit identification code (estabId, subUnitId) columns empty due to data protection reasons</p>
Genomic regions associated with pseudorabies virus infection status in naturally infected feral swine (Sus scrofa)
<p class="MsoNormal">Pseudorabies virus (PRV) – the causative agent of Aujeszky's disease – was eliminated from commercial pig production herds in the United States (US) in 2004; however, PRV remains endemic among invasive feral swine (<em>Sus scrofa</em>). The circulation of PRV among abundant, widespread feral swine populations poses a sustained risk for disease spillover to production herds. Risk–based surveillance has been successfully implemented for PRV in feral swine populations in the US. However, understanding the role of host genetics in infection status may offer new insights into the epidemiology and disease dynamics of PRV that can be applied to management strategies. Genetic mechanisms underlying host susceptibility to PRV are relatively unknown; therefore, we sought to identify genomic regions associated with PRV infection status among naturally infected feral swine using genome–wide association studies (GWAS) and gene set enrichment analysis of single nucleotide polymorphism data (GSEA–SNP). Paired serological and <span>genotypic data were collected from </span>6,081 <span>feral swine distributed across the invaded range within the contiguous US. Three complementary study populations were developed for GWAS: 1) comprehensive population consisting of feral swine throughout the invaded range within the contiguous US; 2) population of feral swine under high, but temporally variable PRV infection pressure; and 3) population of feral swine under temporally stable, high PRV infection pressure. We identified one intronic SNP associated with PRV infection status within candidate gene <em>AKAP6 </em>on autosome 7. Various gene sets linked to metabolic pathways were enriched in the GSEA–SNP. Ultimately, improving disease surveillance efforts in feral swine will be critical to further understanding of the role host genetics play in PRV infection status, helping secure the health of commercial pork production.</span></p>
AHTpin results for peptides identified in the filtrate of nanofiltration of Cynara cardunculus swine blood hydrolysate
<p>AHTpin results for peptides identified by peptidomics in the filtrate of nanofiltration of <em>Cynara cardunculus</em> swine blood hydrolysate. Peptides with a SVM> 1.0 were predicted as antihypertensive.</p>
Co-occurrence of antimicrobials and metals in swine manure as potential drivers of antimicrobial resistance in the environment
<p>In many regions of the United States (US) and other countries, animal manures are often agronomically applied to cropland to recycle nutrients. However, aggregated manure wastes commonly contain contaminants including veterinary antimicrobials, heavy metals, and antimicrobial resistance genes (ARGs) that can stimulate the development and proliferation of antimicrobial resistance (AMR). While the presence of antimicrobials in manure is well-documented, very little has been reported on the co-occurrence of other chemical stressors in swine manure that may stimulate AMR spread in exposed bacteria. This study quantifies and analyzes correlations between antimicrobials, metals, and certain ARGs present in manure samples from swine farms in Iowa, US. Relationships between contaminants and different stages of swine production or feed composition are also investigated. Results revealed notable levels of tetracyclines (up to 1,260 µg g-1 dry weight (d.w.) of manure for oxytetracycline) detected in all samples. Tiamulin, two ionophores (monensin and lasalocid), and one macrolide (tilmicosin) were detected at maximum class concentrations of 9.4, 0.547, and 0.472 µg g-1 d.w., respectively. The median relative abundances of ErmB and TetM were 0.13 and 0.17 copies g-1 wet weight (w.w.) manure (normalized to 16S gene), respectively. Additionally, high levels of copper (Cu), iron (Fe), and zinc (Zn) were detected in all samples, with maximum concentrations of 887, 1,900, and 2,100 µg g-1 d.w., respectively. Notably, uranium was detected in 11 samples, at concentrations up to 0.77 µg g-1. A global analysis of AMR-stressor relationships using Spearman's rank correlation indicates Cu, and Ba are the most positively and significantly correlated with anhydrotetracycline (ATC) and/or anhydrochlortetracycline (ACTC) concentrations in all tested facilities (Cu-ATC: ρ = 0.67, p = 0.0093; Cu-ACTC: ρ = 0.75, p = 0.0022; Ba-ATC: ρ = 0.84, p = 0.0002). Interestingly, ermB and tetM genes were strongly, positively correlated to each other (ρ=0.92, p= 0.000), suggesting possible co-selection, despite the absence of correlation between ARGs and tetracycline concentrations. This study demonstrates the complexity of interactions between antimicrobials, metals, and ARGs in multiple manure storage pits prior to cropland application.</p>
Laboratory data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - North Macedonia
<p>This dataset contains ASF laboratory analytical results in domestic pigs and wild boar.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2023_MK - Food and Veterinary Agency (FVA)</li> <li>ASF2022_MK - Food and Veterinary Agency (FVA)*</li> <li>ASF2022_MK - Food and Veterinary Agency (FVA)</li> </ul> <p> </p> <p> </p> <p>*This version of the ASF laboratory data has been republished with the subunit identification code (sampUnitIds.subUnitId) column empty due to data protection reasons</p>
Data from: Pilot-scale H2S and swine odor removal system using commercially available biochar
<p>This is digital research data corresponding to a published manuscript in "Pilot-scale H2S and swine odor removal system using commercially available biochar" Agronomy 2021, 11, 1611. Dataset may be assessed via the included link at the Dryad data repository.</p> <p>Although biochars made in laboratory seem to remove H<sub>2</sub>S and odorous compounds effectively, very few studies are available for commercial biochars. This study evaluated the efficacy of a commercial biochar (CBC) for removing H<sub>2</sub>S and odorous volatile organic compounds (VOCs).</p>
Tissue-engineered vocal fold replacement in swine: Methods for functional and structural analysis.
<p>S2 Data. 5534 pig squeal events investigated in this study, provided in a folder structure sorted by pigs, pre- / post-treatment and recording date as .wav files.</p>
Pig population data complementing the annual report on the epidemiological analyses of African swine fever (ASF) in the European Union - Bulgaria
<p>This dataset contains swine population data.</p> <p><strong>Reporting authorities contributing to the data collection:</strong></p> <ul> <li>ASF2022_BG - Bulgarian Food Safety Agency (BFSA)</li> </ul>
Safety and Immunogenicity of A/H1N1-SOIV (Swine Flu) Vaccine With and Without Adjuvant in Children, Adolescents and Adults (3 to 64 Years)
ClinicalTrials.gov study NCT00973700. IPD Sharing: Not stated. Countries: 1. Publications: 1.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.