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126 results for “tropical birds”
Data from: Shifting agriculture supports more tropical forest birds than oil palm or teak plantations in Mizoram, northeast India
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Active restoration fosters better recovery of tropical rainforest birds than natural regeneration in degraded forest fragments
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Data from: Effects of Habitat Structure and Adjacent Habitats on Birds in Tropical Rainforest Fragments and Shaded Plantations in the Western Ghats, India
<p>This dataset includes bird community, habitat structure, and vegetation data from the following publication:</p> <p>Raman, T.R.S. 2006. Effects of Habitat Structure and Adjacent Habitats on Birds in Tropical Rainforest Fragments and Shaded Plantations in the Western Ghats, India. <em>Biodiversity and Conservation</em> 15: 1577–1607. https://doi.org/10.1007/s10531-005-2352-5</p> <p><strong>Abstract: </strong>As large nature reserves occupy only a fraction of the earth's land surface, conservation biologists are critically examining the role of private lands, habitat fragments, and plantations for conservation. This study in a biodiversity hotspot and endemic bird area, the Western Ghats mountains of India, examined the effects of habitat structure, floristics, and adjacent habitats on bird communities in shade-coffee and cardamom plantations and tropical rainforest fragments. Habitat and birds were sampled in 13 sites: six fragments (three relatively isolated and three with canopy connectivity with adjoining shade-coffee plantations and forests), six plantations differing in canopy tree species composition (five coffee and one cardamom), and one undisturbed primary rainforest control site in the Anamalai hills. Around 3300 detections of 6000 individual birds belonging to 106 species were obtained. The coffee plantations were poorer than rainforest in rainforest bird species, particularly endemic species, but the rustic cardamom plantation with diverse, native rainforest shade trees, had bird species richness and abundance comparable to primary rainforest. Plantations and fragments that adjoined habitats providing greater tree canopy connectivity supported more rainforest and fewer open-forest bird species and individuals than sites that lacked such connectivity. These effects were mediated by strong positive effects of vegetation structure, particularly woody plant variables, cane, and bamboo, on bird community structure. Bird community composition was however positively correlated only to floristic (tree species) composition of sites. The maintenance or restoration of habitat structure and (shade) tree species composition in shade-coffee and cardamom plantations and rainforest fragments can aid in rainforest bird conservation in the regional landscape.</p>
Data from: Nest attendance by tropical and temperate passerine birds: same constancy, different strategy
1. Parental care in birds varies among species and geographic regions. Incubation behavior influences embryonic development rate and varies substantially among species. 2. We studied attendance at the nest by videoing nests or collecting data from the literature for 112 species in north temperate and lowland tropical sites, then associated patterns of incubation on- and off-bouts with species and environmental traits. 3. Songbirds nesting at low elevations incubate their eggs for an average of 74.1% (12.9 s.d., n = 60 species) of the time in temperate regions and 71.0% (12.2 s.d., n = 52 species) in tropical regions during daylight hours, and 84.3% (8.2 s.d.) and 85.3% (6.2 s.d.), respectively, of each 24-hour cycle. 4. While these attendance percentages do not differ significantly between latitudes, our data also show that lowland tropical songbirds make fewer visits to the nest and, consequently, have longer on-bouts and off-bouts during incubation. This pattern in attendance reflects a latitudinal contrast in parental care strategy, where lowland tropical birds reduce visits to the nest by increasing on- and off-bout lengths while maintaining the same proportion of time spent incubating their eggs (constancy). 5. Similar constancy across latitude suggests that tropical and temperate birds may be similarly constrained to maintain elevated egg temperatures for normal embryo growth. 6. The different attendance strategies adopted in each region may reflect differences in ambient temperature, adult foraging time, and nest predation rate. Consistently warm ambient temperatures likely allow tropical birds to take longer off-bouts, and thereby to reduce activity around the nest, compared to temperate birds.
Rethinking Gloger's Rule: climate, light environments and color in a large family of tropical birds (Furnariidae)
Ecogeographic rules provide a framework within which to test evolutionary hypotheses of adaptation. Gloger's rule predicts endothermic animals should have darker colors in warm and rainy climates. This rule also predicts animals should be redder in warm and dry climates, the so-called "complex Gloger's rule." Empirical studies frequently demonstrate that animals are darker in cool and wet rather than warm and wet climates. Further, sensory ecology predicts that, to enhance crypsis, animals should be darker in darker light environments. We aimed to disentangle the effects of climate and light environments on plumage brightness and redness in the large Neotropical passerine family Furnariidae. Birds in cooler and rainier climates had darker plumage, even after controlling for habitat type. Birds in darker habitats had darker plumage, even after controlling for climate. The effects of temperature and brightness interact so that the negative effect of precipitation on brightness is strongest in cool temperatures. Finally, birds tended to be redder in warm and dry habitats but also, surprisingly, in cool and wet locales. We suggest Gloger's rule results from complementary selective pressures arising from myriad ecological factors, including crypsis, thermoregulation, parasite deterrence and resistance to feather abrasion.
Data from: Tropical bird species have less variable body sizes
Ecologists have often predicted that species' niche breadths should decline toward the equator. Dan Janzen arrived at this prediction based on climatic constraints, while Robert MacArthur argued that a latitudinal gradient in resource specialization drives the pattern. This idea has some support when it comes to thermal niches, but has rarely been explored for other niche dimensions. Body size is linked to niche dimensions related to diet, competition, and environmental tolerance in vertebrates. We identified 68 pairs of tropical and nontropical sister bird species using a comprehensive phylogeny and used the VertNet specimen database to ask whether tropical birds have lower intraspecific body-size variation than their nontropical sister species. Our results show that tropical species have less intraspecific variability in body mass ( = 0.0092; p = 0.009). Variation in body-size variability was poorly explained by both abiotic and biotic drivers, thus the mechanisms underlying the pattern are still unclear. The lower variation in body size of tropical bird species may have evolved in response to more stable climates and resource environments.
River dams and the stability of bird communities: A hierarchical Bayesian analysis in a tropical hydroelectric power plant
<ol> <li>The effects of anthropogenic disturbance upon the stability of wildlife communities depend on the heterogeneity and connectivity of habitat remnants on multiple scales. The number of hydroelectric dams in biodiversity hotspots (Africa, South America and Asia) is growing rapidly. To establish their environmental impact, it is essential to understand the dynamics of wildlife communities before and following the establishment of dams.</li> <li>We evaluated the impacts of the filling of the Serra do Facão hydroelectric reservoir in the São Marcos river, central Brazil, upon the bird community. Using data from 1,145 surveys across 20 sampling sites over eight years, two years before and six years after the filling of the reservoir, we assessed the resistance, i.e., maintenance close to an equilibrium state during the disturbance, and resilience, i.e., ability to return to the original state following the disturbance, of the bird community. We used spatiotemporal hierarchical Bayesian models to assess the effects of reservoir filling on five community parameters: abundance, richness, phylogenetic diversity, functional diversity and species composition.</li> <li>In the period subsequent to reservoir filling, there was (i) a marked reduction in bird abundance, richness, phylogenetic diversity and functional diversity, and (ii) a reduction in the proportion of forest species, coupled with an increase in the proportion of savanna species. Except for bird abundance, none of the other community attributes returned to their original levels, even after six years. Our findings indicate that Cerrado bird communities have both low resistance and low resilience to habitat loss associated with the establishment of hydroelectric reservoirs.</li> <li> <i>Synthesis and applications.</i> The environmental costs of hydroelectric dams are still underestimated or neglected in Brazil. A new paradigm in the assessment of their environmental impacts is warranted, incorporating (i) models of spatiotemporal variations based on long-term monitoring with surveys initiated before disturbances and (ii) measures of functional and phylogenetic diversity, such that society can understand the costs and benefits of the establishment of new hydroelectric dams and make informed decisions. Biodiversity loss could be minimized by ensuring the preservation and connectivity of alluvial habitats, capable of maintaining the supply of resources and the functional and phylogenetic attributes of bird communities associated with such habitats.</li> </ol>
Vanellus chilensis dataset accompanying PLOS ONE paper "Automated Sound Recognition Provides Insights into the Behavioral Ecology of a Tropical Bird"
<p>Southern Lapwing <em>Vanellus chilensis</em> dataset accompanying the PLOS ONE article</p> <p>O. Jahn, T. Ganchev, M.I. Marinez and K.L. Schuchmann: Automated Sound Recognition Provides Insights into the Behavioral Ecology of a Tropical Bird. DOI:10.1371/journal.pone.0169041</p> <p>---<br> BL01:<br> Background Library 01 consists of</p> <p>BL01 >> BL_CHVACH_free_final:<br> 54 hand-cleaned (<em>Vanellus chilensis</em>-free) background files and</p> <p>BL01 >> PSC008_forest:<br> 36 original soundscapes recorded inside forest, which may contain a few target signals from overflying lapwings.</p> <p>---<br> PONE_VACH_AnnualCycle_Statistics:<br> Contains the Excel files<br> - 2013CHVACH_BreedingCycle_Statistics_PONE: statistics on <em>V. chilensis</em> activity patterns, Apr. 2013 to Sep. 2013.<br> - 2013CHVACH_FalseNegatives_PONE: determination of the false negative rate based on an expert-annotated sample of 26 soundcsape recordings<br> - 2013CHVACH_FalsePositives_PONE: determination of the false positive rate based on an expert-annotated random sample of 1250 automated <em>V. chilensis</em> detections.</p> <p>---<br> TL01_BIAVCHCHVACH_20130813v2_HandCleaned:<br> Training library for the development of the <em>V. chilensis</em> recognizer, consisting of 90 hand-filtered recordings of the target species.</p> <p>---<br> VACH_Detector_results >> VACHdetectorOutput_PONE.zip:<br> TXT detector output files, listing timestamps of potential <em>V. chilensis</em> sound events.</p> <p>---<br> VACH_FNrate_20160706:<br> Validation library used to determine the false negative rate. The library consists of 26 expert-annotated sound files. Annotations were made in Adobe Audion v3.0.</p> <p>---<br> VL01_VACH_MonoB<br> and<br> VL01_VACH_MonoB:<br> Validation library used for the fine-tuning of the recognizer settings.</p> <p>---<br> Important notes on the annotation of the VACH_FNrate_20160706 library:</p> <p>1) In general, we used the procedure described in Ganchev et al. 2015 for the annotation of VACH validation libraries (see next section).</p> <p>2) However, the detector-generated timestamps were not changed! For the following reasons, it is not possible to use the VACH_FN_rate library as a validation library for the development of improved recognizer versions:</p> <p>(a) The VACH detector overlooked many of the weaker signals within a VACH call series. Therfore the detector-generated annotations are incomplete.<br> (b) For the same reason some automatically-generated detections may refer to a single VACH call event (double hits).</p> <p>Details on the method used for the annotation of the VACH validation libraries are described in Ganchev et al. 2015, pp.6100f: 2.1.3.3.Vanellus chilensis validation dataset.</p>
Data and code for: "Large reductions in tropical bird abundance attributable to heat extreme intensification "
<p>Data and code necessary to reproduce results of paper:</p> <p>Large reductions in tropical bird abundance attributable to heat extreme intensification</p> <p>By Maximilan Kotz, Tatsuya Amanon and James Watson.</p> <p>Please contact maximilian.kotz@bsc.es / maxkotz@pik-potsdam.de for questions.</p> <p> </p>
Data from: Land-use homogenization reduces the occurrence and diversity of frugivorous birds in a tropical biodiversity hotspot
<p>These datasets have the variables used in the paper "Land-use homogenization reduces the occurrence and diversity of frugivorous birds in a tropical biodiversity hotspot" as well as the script to perform the analysis.</p>
No evidence for trade-offs between bird diversity, yield and water table depth on oil palm smallholdings: implications for tropical peatland landscape restoration
<p>Tropical peat swamp forests retain large carbon stocks and support unique biodiversity, but clearance and drainage for agriculture have resulted in fires, carbon emissions and biodiversity losses. Initiatives to re-wet cultivated peatlands may benefit biodiversity if this protects remaining forests from fire and agricultural encroachment, but there are concerns that re-wetting could reduce yields and damage livelihoods, as relationships between drainage, on-farm biodiversity, and crop yields have not been studied.</p> <p>We examined oil palm fruit yields and bird diversity on 41 smallholder farms in Jambi (Sumatra, Indonesia), which varied in drainage intensity (12-month mean water table per plot from August 2018 to August 2019: -52 to -3 cm below ground). We also compared farm bird diversity with a neighbouring area of protected forest (11,000 ha, 21 plots; mean water table per plot -3 to +15 cm).</p> <p>Bird species richness (3-18 species per plot), species composition, and oil palm yields (4.5-19.2 t fresh fruit bunch ha-1 yr-1) varied among farms, but were not detectably affected by water table depth, although ground-level vegetation was more complex on wetter farms. Bird richness in oil palm (mean = 10.3 species per plot) was <50% of that in forest (26 species per plot), and only three out of 35 conservation-priority species found in forest were recorded in oil palm.</p> <p>Synthesis & applications: Tropical peatlands in Indonesia have been drained to allow farmer access and improve farm yields, but we found no trade-offs between drainage depth, yields or bird diversity on smallholder oil palm farms in our study landscape. Current restoration initiatives to re-wet peat may benefit farmers by reducing fire risk, without affecting yields. Wetter farms had increased understorey vegetation complexity, but this did not affect bird diversity, so we find no evidence that re-wetting improves on-farm biodiversity within the studied range of drainage depths. However, on-farm fire reduction efforts in cultivated peatlands, including re-wetting, will be vital for reducing the risk of fires escaping into nearby forests, which contain unique and diverse bird species assemblages. Protection of remaining peatland forests from fire and clearance is key for biodiversity conservation, and for providing a source of seed dispersers and genetic material for future forest and landscape restoration efforts. Restoration of more biodiversity-friendly land covers will improve landscape permeability and help conserve species and the ecosystem services they deliver.</p>
Weak effects of birds, bats and ants on their arthropod prey on pioneering tropical forest gap vegetation
<p>The relative roles of plants competing for resources versus top-down control of vegetation by herbivores, in turn impacted by predators, during early stages of tropical forest succession remain poorly understood. Here we examine the impact of insectivorous birds, bats and ants exclusion on arthropods communities on replicated 5x5 m of pioneering early successional vegetation plots in lowland tropical forest gaps in Papua New Guinea. In plots from which focal taxa of predators were excluded we observed increased biomass of herbivorous and predatory arthropods, and increased density, and decreased diversity of herbivorous insects. However, changes in the biomass of plants, herbivores and arthropod predators were positively correlated or uncorrelated between these three trophic levels and also between individual arthropod orders. Arthropod abundance and biomass correlated strongly with the plant biomass irrespective of the arthropods' trophic position – a signal of bottom-up control. Patterns in herbivore specialization confirm lack of a strong top-down control and were largely unaffected by the exclusion of insectivorous birds, bats and ants. No changes of plant-herbivore interaction networks were detected except for decrease in modularity of the exclosure plots. Our results suggest weak top-down control of herbivores, limited compensation between arthropod and vertebrate predators, and limited intra-guild predation by birds, bats and ants. Possible explanations are strong bottom-up control, a low activity of the higher order predators, especially birds, possibly also bats, in gaps, and continuous influx of herbivores from surrounding mature forest matrix.</p>
Acoustic phenology of tropical resident birds differs between native forest species and parkland colonizer species
<p>Most birds are characterized by a seasonal phenology closely adapted to local climatic conditions, even in tropical habitats where climatic seasonality is slight. In order to better understand the phenologies of resident tropical birds, and how phenology may differ among species at the same site, we used ~70,000 hours of audio recordings collected continuously for two years at four recording stations in Singapore and nine custom-made machine learning classifiers to determine the vocal phenology of a panel of nine resident bird species. We detected distinct seasonality in vocal activity in some species but not others. Native forest species sang seasonally. In contrast, species which have had breeding populations in Singapore only for the last few decades exhibited seemingly aseasonal or unpredictable song activity throughout the year. Urbanization and habitat modification over the last 100 years have altered the composition of species in Singapore, which appears to have influenced phenological dynamics in the avian community. It is unclear what is driving the differences in phenology between these two groups of species, but it may be due to either differences in seasonal availability of preferred foods, or newly established populations may require decades to adjust to local environmental conditions. Our results highlight the ways that anthropogenic habitat modification may disrupt phenological cycles in tropical regions in addition to altering the species community.</p>
Data from: Multiple dimensions of bird beta diversity support that mountains are higher in the tropics
<p><b>Aim</b> We examine latitudinal effects of breeding bird taxonomic, phylogenetic and functional β-diversity (Tβ, Pβ and Fβ, respectively) along elevational gradients to test predictions derived from Janzen's (1967) classic ideas that tropical mountains represent stronger dispersal barriers than temperate mountains.</p> <p><b>Location</b> Global</p> <p><b>Taxon</b> Birds</p> <p><b>Methods</b> Using a global dataset from 46 mountains, we examine latitudinal patterns of Tβ, Pβ, and Fβ, and their components: β <sub>rich</sub> and β <sub>repl</sub>. For each mountain and each dimension of diversity we calculated (a) total β-diversity, (b) the steepness of distance decay patterns, and (c) within-mountain variability in pairwise β-diversity and regressed each one of these response variables against absolute latitude. We predicted that tropical montane biotas would have (1) overall higher Tβ, Pβ, and Fβ, (2) faster distance decay patterns and (3) higher within-mountain variability in pairwise β-diversity. Furthermore, we expected the richness component β <sub>rich</sub> to be more important in temperate mountains, and the replacement component β <sub>repl</sub> in tropical mountains.</p> <p><b>Results</b> Latitude had a negative effect on total β-diversity for all dimensions of diversity. Similarly, metrics of Tβ and Pβ mostly agree with our expectations, whereas Fβ showed contrasting results with steeper distance decay curves and higher within-mountain variability in temperate mountains. Overall, β <sub>rich</sub> was a more important component at high elevations in the tropics and across elevations in temperate mountains, and β <sub>repl </sub>more important in tropical low and mid-elevations.</p> <p><b>Main Conclusions</b> Our findings are consistent with tropical mountain assemblages containing species with narrow elevational distributions, low dispersal ability and potentially high allopatric speciation, resulting in high β-diversity across elevations. Contrasting results for Fβ indicate high niche packing in tropical assemblages, with most changes in functional diversity among assemblages involving species redundant in trait space. --</p>
Data for: The El Nino-Southern Oscillation dramatically reduces the frequency of reproduction and reproductive rate of a tropical forest bird
<p>Although climate change has been implicated in population declines of tropical forest birds, there is a critical lack of data on the mechanisms underlying these declines. Attempts to link climatic factors to variation in adult survival, fecundity, or nest success have been largely inconclusive. Recent community-scale analyses have suggested that tropical birds may be less likely to breed under adverse conditions, but long-term data on individual reproduction are needed to test this hypothesis. Here we leverage 12 years of data on a lowland forest bird, the greater ani (<i>Crotophaga major</i>), to investigate how demographic parameters vary with phase of the El Niño – Southern Oscillation (ENSO), a major driver of climatic conditions in tropical wet forest. The likelihood of breeding and annual reproductive rate both decreased dramatically in El Niño-like years, with only 37.5% of adults attempting breeding in 2015 (a strong El Niño year). For birds that did breed, however, clutch size and daily nest predation rate were unaffected by climate. Of the local climate variables investigated, dry season length and the frequency of high temperatures were most closely associated with reproductive failure. These results indicate that El Niño conditions alter the demography of greater anis by reducing the likelihood of reproduction, a response that may be more widespread than currently recognized. We suggest that reduced reproduction under adverse conditions represents an important and understudied aspect of the life histories of tropical forest birds.</p>
Data and analysis code for Norton and DuVal - Causes and consequences of nest site fidelity in a tropical lekking bird: win-stay-lose-shift tactics are unrelated to subsequent success, but site-faithful females nest earlier
<p>Nest site selection influences the survival of care-giving parents and their offspring, but search costs and site availability may limit site choices. Returning to previous nest sites may reduce costs and allow parents to better avoid local predators or access familiar resources. We investigated nest site fidelity in the Lance-tailed Manakin (Chiroxiphia lanceolata), in which long-lived females raise offspring without male assistance, and found that site choices are responsive to past success but do not predict future outcomes. We compared georeferenced nest locations for the same females detected in consecutive years (245 comparisons for 138 females) and females nesting repeatedly within a year (137 comparisons for 97 females). Females were faithful to nesting sites in 13.9% of comparisons across years and 10.2% within years, and were more likely to nest again in the same site if their offspring fledged. When switching sites, females moved farther if their previous nest failed. Nest-site fidelity was unrelated to mate fidelity or female age. We then assessed whether site choice related to subsequent female survival, nest timing, or nest survival. Contrary to the hypothesis that win-stay-lose-shift tactics improve subsequent nesting outcomes, we found females were no more likely to fledge chicks or survive to a later year after they reused nest-sites. However, across years, site-faithful females nested earlier on average than females that switched sites. Early nests were more likely to fledge chicks, and early-nesting females were more likely to renest when their first nesting effort was complete. Win-stay-lose-shift tactics may allow females to avoid areas where predation is likely, but new nest sites are not safer. Females that reuse nest sites benefit from early nest initiation, which both correlates with immediate success and creates potential for longer-term benefits of fidelity through increased opportunities to renest throughout the breeding season.</p>
Dispersal limitation predicts the spatial and temporal filtering of tropical bird communities in isolated forest fragments
<p>The link between dispersal traits and patterns of community assembly remains a frontier in understanding how vertebrate communities persist in fragmented landscapes. Using experimental release trials and intensive field surveys of bird communities in fragmented forests of the Peruvian and Colombian Andes, we demonstrate that morphological traits related to movement (1) predict experimental flight performance and (2) exhibit dispersal-mediated environmental filtering at the community scale. After correcting for body size, four traits hypothesized to influence flight ability (wing length, wing pointedness, wing loading, and eye size) predicted distance flown across a hostile experimental landscape, with successful species having significantly longer pointed wings, carrying less mass per unit wing area (i.e., lower wing loading), and having smaller eyes. Species with larger eyes also displayed increased flight latency, potentially due to disability glare. At the community scale we detected a gradient of dispersal-mediated environmental filtering in fragments compared to reference forest within the same landscape, with relative differences in trait values explained by the temporal and spatial extent of patch isolation. In the Colombian landscape where fragments had been isolated for > 60 years, communities were filtered for species with long and narrow wings and small eyes, especially within the most spatially isolated fragments. We observed the opposite pattern in the more recently fragmented Peruvian landscape (15-30 years): communities within fragments tended to have shorter and more rounded wings compared to those in nearby contiguous forests, suggesting that dispersal-limited species accumulate in the initial years following patch isolation due to "restricted dispersal" and represent an extinction debt yet to be paid. Our results (1) experimentally validate the use of morphological traits as proxies for movement ability in fragmented landscapes, (2) demonstrate that visual acuity functions as a novel dimension of dispersal limitation, and (3) quantify how the spatial and temporal components of patch isolation produce a gradient in dispersal-mediated environmental filtering and extinction debt for communities inhabiting fragments.</p>
Data from: Nest attendance by tropical and temperate passerine birds: same constancy, different strategy
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Data from: When do tropical birds breed? The case of Colombian species assemblages
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Data from: Effects of Habitat Structure and Adjacent Habitats on Birds in Tropical Rainforest Fragments and Shaded Plantations in the Western Ghats, India
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