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621 results for “methodologies”

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dryad28/100

Recording fine-scale movement of ground beetles by two methods: Potentials and methodological pitfalls

<p><span><span>Movement trajectories are usually recorded as a sequence of discrete movement events described by two parameters: step length (distance) and turning angle (bearing). One of the most widespread methods to record the geocoordinates of each step is by a GPS device. Such devices have limited suitability for recording fine movements of species with low dispersal ability including flightless carabid beetles at small spatio-temporal scales. As an alternative, the distance-bearing approach can avoid the measurement error of GPS units since it uses directly measured distances and compass azimuths. As no quantification of measurement error between distance-bearing and GPS approaches exists so far, we generated artificial fine-scale trajectories and in addition radio-tracked living carabids in a temperate forest and recorded each movement step by both methods. Trajectories obtained from distance-bearing were compared to those obtained by a GPS device in terms of movement parameters. Consequently, both types of trajectories were segmented by state-switching modeling into two distinct movement stages typical for carabids: random walk and directed movement. We found that the measurement error of GPS compared to distance-bearing was 1.878 m (SEM = 0.181 m) for distances and 31.330° (SEM = 2.066°) for bearings. Moreover, these errors increased under dense forest canopy and rainy weather. Distance error did not change with increasing distance recorded by distance-bearing but bearings were significantly more sensitive to error at short distances. State-switching models showed only slight, not significant, differences in movement states between the two methods in favor of the random walk in the distance-bearing approach. However, the shape of the GPS-measured trajectories considerably differed from those recorded by distance-bearing caused especially by bearing error at short distances. Our study showed that distance-bearing could be more appropriate for recording movement steps not only of ground-dwelling beetles but also other small animals at fine spatio-temporal scales.</span></span></p>

opencc-zeroMay 2022View details →
dryad28/100

Combining biogeographic approaches to advance invasion ecology and methodology

<p>1) Understanding the causes of plant invasions requires that parallel field studies are conducted in the native and introduced ranges to elucidate how biogeographic shifts alter the individual performance, population success, and community-level impacts of invading plants. Three primary methods deployed in in situ biogeographic studies are directed surveys, where researchers seek out populations of target species, randomized surveys, and field experiments. Despite the importance of these approaches for advancing biogeographic research, their relative merits have not been evaluated.</p> <p>2) We concurrently deployed directed surveys, randomized surveys, and in situ field experiments for studying six grassland plant species in the native and introduced ranges. Metrics included plant size, fecundity, recruitment, abundance, and invader impact, as well as soil properties and root associations with putative fungal mutualists and pathogens.</p> <p>3) Consistent with key invasion hypotheses, Bromus tectorum experienced increased size and fecundity in the introduced range linked to population increases and significant invader impacts, along with altered fungal associations. However, performance differences did not predict population increases and invader impacts across species. Rather, the differential effect of disturbance in facilitating greater recruitment in the introduced range appeared to play a crucial, though previously underexplored, role in driving invader success.</p> <p>4) Directed surveys consistently generated information on plant performance and fungal associations. However, soil sampling suggested that directed surveys may have been biased toward disturbed conditions for half the species. Randomized surveys generated robust data for population comparisons and impact, but generally failed to produce performance metrics for species that were uncommon or flowered outside the peak sampling window. Field experiments controlled for bias and confounding factors and provided rare information on recruitment and disturbance effects, but scant recruitment in the native range and ethical constraints on growing invaders in the introduced range limited information on performance and plant-fungal interactions.</p> <p>5) Synthesis. Each method had strengths and weaknesses. However, when combined they provided complementary information to paint the most complete biogeographic picture to date for several introduced plants. We propose a hybrid approach to optimize biogeographic studies.</p>

opencc-zeroJun 2022View details →
zenodo28/100

Supplementary Material for: A new methodology for an old problem: A corpus-based typology of adnominal word order in European languages

<p>Published on IJL</p>

opencc-by-4.0Sep 2022View details →
zenodo28/100

"Methodological and force field effects in the molecular dynamics-based prediction of binding free energies of host-guest systems"

Open the record for dataset details and reuse information.

opencc-by-4.0Apr 2024View details →
zenodo28/100

METHODOLOGICAL APPROACHES TO UNDERSTANDING THE CATEGORY OF "SYSTEM OF SOURCES OF CONSTITUTIONAL LAW"

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opencc-by-4.0May 2024View details →
zenodo28/100

THE METHODOLOGY OF THE STUDY OF MORPHOFUNCTIONAL CHANGES IN THE INTESTINE AS A RESULT OF GROUNDWATER CONSUMPTION.

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opencc-by-4.0Jul 2024View details →
zenodo28/100

METHODOLOGY OF TEACHING MOLECULAR PHYSICS FOR FUTURE PHYSICS TEACHERS

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opencc-by-4.0Jul 2024View details →
zenodo28/100

ON THE METHODOLOGY OF ORGANIZING PHYSICAL KVN IN A TECHNICAL UNIVERSITY

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opencc-by-4.0Jul 2024View details →
zenodo28/100

SUMMR: The SPARQL Usage for Mapping Maintenance and Reuse Methodology

<p>Data related to the experiments of the SUMMR&nbsp;methodology.</p>

opencc-by-4.0Mar 2018View details →
zenodo28/100

Supplementary material 7 from: Schmidt M, Lischeid G, Nendel C (2018) Data on and methodology for measurements of microclimate and matter dynamics in transition zones between forest and adjacent arable land. One Ecosystem 3: e24295. https://doi.org/10.3897/oneeco.3.e24295

R Script for converting of microclimatic data

opencc-zeroMay 2018View details →
zenodo28/100

Flow diagram depicting an overview of the proposed layer optimisation methodology for Li-ion pouch cells.

<p>Flow diagram depicting an overview of the proposed layer optimisation methodology for Li-ion pouch cells.</p>

opencc-by-nc-nd-4.0Nov 2018View details →
zenodo28/100

Schematic representing the vehicle–to–cell hierarchical overview of a typical electrified powertrain architecture. This represents the system-level context within which the proposed layer optimisation framework has been developed. Two xEV powertrains — a) BEV and b) series PHEV — are chosen as examples to demonstrate how the methodology facilitates common module designs for such battery packs.

<p>Schematic representing the vehicle&ndash;to&ndash;cell hierarchical overview of a typical electrified powertrain architecture. This represents the<br> system-level context within which the proposed layer optimisation framework has been developed. Two xEV powertrains &mdash; a) BEV and b) series PHEV &mdash; are chosen as examples to demonstrate how the methodology facilitates common module designs for such battery packs.</p>

opencc-by-nc-nd-4.0Nov 2018View details →
zenodo28/100

Flow diagram depicting an overview of the proposed layer optimisation methodology for Li-ion pouch cells.

<p>Flow diagram depicting an overview of the proposed layer optimisation methodology for Li-ion pouch cells.</p>

opencc-by-nc-nd-4.0Nov 2018View details →
zenodo28/100

Alignment and mapping methodology impact transcript abundance estimation

<pre>SRR109.txt -&gt; list of accession numbers used for experimental analysis. simulatedquants -&gt; Bowtie2 pipeline quantification results on the 109 samples, that are used to simulate datasets for futher analysis. scriptsSimulate -&gt; scripts to generate simulated data using the 109 quantification results on real data. The &quot;runme.sh&quot; file can be executed to generate a &quot;data&quot; folder with all the simulated reads and ground truth count and TPM values. table1Data -&gt; fasta and true abundance files for 10 replicates of simulated data (from human transcriptome GENCODE v29) used to generate table 1 of the manuscript. table2Data -&gt; fasta and true abundance files for 10 replicates of simulated data (from mouse transcriptome PWK variant) used to generate table 2 of the manuscript. refFastas -&gt; the human and mouse reference fasta files containing the sequence-similar decoy sequences, which can be used to construct the salmon index for SA.</pre>

opencc-by-4.0Apr 2019View details →
zenodo28/100

Figure 2. A in Development of experimental mesocosms for cicada nymphs Graptopsaltria nigrofuscata: methodology and research recommendations

Figure 2. A paired box plot for comparing fresh weight (gram) of final instar Graptopsaltria nigrofuscata nymphs between the beginning (16-Apr, Blue) and the end (6 Jul, Red) of the mesocosm experiment. Two points of 16 Apr data with no line connected to 6 Jul are fresh weight of cicada nymphs that died until the end of experiment. Paired t-test indicated a significant increase in fresh weight of the nymphs from April to July (t = -2.8334, df = 5, p-value = 0.037).

opencc-by-4.0Jul 2021View details →
zenodo28/100

Data from "Analyzing Emulsion Dynamics via Direct Visualization and Statistical Methodologies"

<p>The data used in "<strong>Analyzing Emulsion Dynamics via Direct Visualization and Statistical Methodologies</strong>".</p>

opencc-by-nc-nd-4.0Aug 2024View details →
zenodo28/100

Deep Learning-Based Methodology for Vulnerability Detection in Smart Contracts

<p>智能合约漏洞检测公共数据集</p>

opencc-by-4.0Aug 2024View details →
zenodo28/100

Fig. 2 in Automated size measurements of Halyomorpha halys (Stål) (Heteroptera: Pentatomidae) with simple imagebased methodology

Fig. 2. Relationship between sizes of Halyomorpha halys from manually measured versus image-computed sizes for (A) ventral width and (B) ventral length.

opencc-by-4.0Oct 2022View details →
zenodo28/100

Understanding stakeholders' perspectives behind wildfires in Sicily: A Q-Methodology Approach

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opencc-by-4.0Sep 2024View details →
zenodo28/100

Octopus (Diaspora Event Fabric) Evaluation Methodology and Results

<p>See the artifact description in FTXS24_Octopus_AD.pdf.</p>

opencc-by-4.0Sep 2024View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

ScienceDex for faculty

Your academic CV and NIH biosketch

Make your CV in your school's format and your NIH biosketch from it, then download both as Word files.