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8,038 results for “validation.”
Identification and single-base gene-editing functional validation of a cis-EPO variant as a genetic proxy for EPO-increasing therapies.
<p>Summary statistics for the genome-wide association study meta-analysis of circulating EPO in 6,127 individuals of European and African American descent. Effect sizes are aligned to allele 1. </p> <p>Description of column names:<br> # Marker - this is the marker name; chromosome:position<br> # Allele1 - the first allele for this marker in the first file where it occurs<br> # Allele2 - the second allele for this marker in the first file where it occurs<br> # Freq1 - weighted average of frequency for allele 1 across all studies<br> # FreqSE - corresponding standard error for allele frequency estimate<br> # MinFreq - minimum frequency for allele 1 across all studies<br> # MaxFreq - maximum frequency for allele 1 across all studies<br> # Effect - overall estimated effect size for allele1<br> # StdErr - overall standard error for effect size estimate<br> # P-value - meta-analysis p-value<br> # Direction - summary of effect direction for each study, with one '+' or '-' per study. Order of the studies is InCHIANTI, BLSA, HealthABC Europeans, PREVEND, HealthABC African Americans<br> # HetISq - I^2 statistic which measures heterogeneity on scale of 0-100%<br> # HetChiSq - chi-squared statistic in simple test of heterogeneity<br> # df - degrees of freedom for heterogeneity statistic<br> # HetPVal - P-value for heterogeneity statistic<br> # TotalSampleSize - overall sample size for that variant in the meta-analysis</p> <p> </p>
Identification and single-base gene-editing functional validation of a cis-EPO variant as a genetic proxy for EPO-increasing therapies.
<p>Raw fast-qc files for RNA sequencing analysis of whole <em>EPO</em> gene knock-outs generated through CRISPR-Cas9 gene-editing in HEK-293 cells compared to wild-type controls. </p> <p>Wild-type cell-lines (Empty 1 - Empty 4) were transfected with empty CRISPR-Cas9 constructs to ensure cells were treated under the same experimental conditions. Whole EPO gene knock-outs were generated using a double gRNA approach with CRISPR-Cas9 gene-targeting. Two whole EPO gene knock-out cell-lines were generated (KO-A and KO-B).</p> <p>Library preparation was performed using the TruSeq DNA HT Library Preparation Kit using the 3’ poly-A tail primer Oligo(dT) from Illumina (Illumina, California, USA). RNA Sequencing was performed using the Illumina HiSeq 2500 high-throughput sequencing system (Illumina, California, USA). We resulted in 75 bp paired-end sequences.</p> <p> </p>
Validation and implementation of a mobile app decision support system for quality assurance of tumor boards. Analyzing the concordance rates for prostate cancer from a multidisciplinary tumor board of a University Cancer Center
<p>The data set contains anonymized clinicopathologic data of patients with prostate cancer. The data was used to determine concordance rates between recommendations proposed by the digital decision support system EasyOncology and actual treatment recommendations given by a tumor board. </p>
Validation of the Bond et. al. (2010) SDSS-derived kinematic models for the Milky Way's disk and halo stars with Gaia Data Release 3 proper motion and radial velocity data
<p>We validate the Bond et. al. (2010) kinematic models for the Milky Way's disk and halo stars with Gaia Data Release 3 data. Bond et al. constructed models for stellar velocity distributions using stellar radial velocities measured by the Sloan Digital Sky Survey (SDSS) and stellar proper motions derived from SDSS and the Palomar Observatory Sky Survey astrometric measurements. These models describe velocity distributions as functions of position in the Galaxy, with separate models for disk and halo stars that were labeled using SDSS photometric and spectroscopic metallicity measurements. We find that the Bond et al. model predictions are in good agreement with recent measurements of stellar radial velocities and proper motions by the Gaia survey. In particular, the model accurately predicts the skewed non-Gaussian distribution of rotational velocity for disk stars and its vertical gradient, as well as the dispersions for all three velocity components. Additionally, the spatial invariance of velocity ellipsoid for halo stars when expressed in spherical coordinates is also confirmed by Gaia data at galacto-centric radial distances of up to 15 kpc.</p>
Validation Test of Landslide Prone Areas from the Weighting Results of Slope and Rainfall Parameters in Sragen Regency
<p>This material has presented on 2nd International Conference on Advanced Research in Engineering and Technology in October 25, 2023.</p>
FunVIP: Fungal Validation and Identification Pipeline based on phylogenetic analysis - Validation dataset
<p>This is dataset and analysis to regenerate results published in Molecular Ecology Resources</p>
Figure 27 from: Renan I, Assmann T, Freidberg A (2018) Taxonomic revision of the Graphipterus serrator (Forskål) group (Coleoptera, Carabidae): an increase from five to 15 valid species. ZooKeys 753: 23-82. https://doi.org/10.3897/zookeys.753.22366
Figure 27 Dorsal habitus of Graphipterus: a G. sharonae sp. n. b G. stagonopsis sp. n.
Figure 11 from: Renan I, Assmann T, Freidberg A (2018) Taxonomic revision of the Graphipterus serrator (Forskål) group (Coleoptera, Carabidae): an increase from five to 15 valid species. ZooKeys 753: 23-82. https://doi.org/10.3897/zookeys.753.22366
Figure 11 Habitat of Graphipterus minutus minutus: Shallow sand dunes in Wadi Ram, Jordan.
Figure 26 from: Renan I, Assmann T, Freidberg A (2018) Taxonomic revision of the Graphipterus serrator (Forskål) group (Coleoptera, Carabidae): an increase from five to 15 valid species. ZooKeys 753: 23-82. https://doi.org/10.3897/zookeys.753.22366
Figure 26 Dorsal habitus of Graphipterus: a G. rotundatus b G. serrator.
Figure 23 from: Renan I, Assmann T, Freidberg A (2018) Taxonomic revision of the Graphipterus serrator (Forskål) group (Coleoptera, Carabidae): an increase from five to 15 valid species. ZooKeys 753: 23-82. https://doi.org/10.3897/zookeys.753.22366
Figure 23 Dorsal habitus of Graphipterus: a G. minutus minutus b G. minutus goryi.
Figure 14 from: Renan I, Assmann T, Freidberg A (2018) Taxonomic revision of the Graphipterus serrator (Forskål) group (Coleoptera, Carabidae): an increase from five to 15 valid species. ZooKeys 753: 23-82. https://doi.org/10.3897/zookeys.753.22366
Figure 14 Habitat of Graphipterus serrator: Shifting sand dunes in the Western Negev Sands, Israel.
Figure 10 from: Renan I, Assmann T, Freidberg A (2018) Taxonomic revision of the Graphipterus serrator (Forskål) group (Coleoptera, Carabidae): an increase from five to 15 valid species. ZooKeys 753: 23-82. https://doi.org/10.3897/zookeys.753.22366
Figure 10 Spectrograms of two Graphipterus species: G. serrator and G. multiguttatus.
Figure 1 from: Renan I, Assmann T, Freidberg A (2018) Taxonomic revision of the Graphipterus serrator (Forskål) group (Coleoptera, Carabidae): an increase from five to 15 valid species. ZooKeys 753: 23-82. https://doi.org/10.3897/zookeys.753.22366
Figure 1 Patterns and morphological characters used in the descriptions (Graphipterus serrator).
Figure 16 from: Renan I, Assmann T, Freidberg A (2018) Taxonomic revision of the Graphipterus serrator (Forskål) group (Coleoptera, Carabidae): an increase from five to 15 valid species. ZooKeys 753: 23-82. https://doi.org/10.3897/zookeys.753.22366
Figure 16 Distributional records of G. luctuosus, G. mauretensis sp. n., and G. reymondi.
Figure 17 from: Renan I, Assmann T, Freidberg A (2018) Taxonomic revision of the Graphipterus serrator (Forskål) group (Coleoptera, Carabidae): an increase from five to 15 valid species. ZooKeys 753: 23-82. https://doi.org/10.3897/zookeys.753.22366
Figure 17 Distributional records of G. barthelemyi, G. peletieri, and G. valdanii.
Figure 25 from: Renan I, Assmann T, Freidberg A (2018) Taxonomic revision of the Graphipterus serrator (Forskål) group (Coleoptera, Carabidae): an increase from five to 15 valid species. ZooKeys 753: 23-82. https://doi.org/10.3897/zookeys.753.22366
Figure 25 Dorsal habitus of Graphipterus: a G. piniamitaii sp. n. b G. reymondi.
Figure 22 from: Renan I, Assmann T, Freidberg A (2018) Taxonomic revision of the Graphipterus serrator (Forskål) group (Coleoptera, Carabidae): an increase from five to 15 valid species. ZooKeys 753: 23-82. https://doi.org/10.3897/zookeys.753.22366
Figure 22 Dorsal habitus of Graphipterus: a G. magnus sp. n. b G. mauretensis sp. n.
Figure 24 from: Renan I, Assmann T, Freidberg A (2018) Taxonomic revision of the Graphipterus serrator (Forskål) group (Coleoptera, Carabidae): an increase from five to 15 valid species. ZooKeys 753: 23-82. https://doi.org/10.3897/zookeys.753.22366
Figure 24 Dorsal habitus of Graphipterus a G. multiguttatus b. G. peletieri.
Manual cross-validation data for the article: "Comparison of bibliographic data sources: Implications for the robustness of university rankings"
<p>These are sets of data collected from the manual cross-validation of DOIs (and related research outputs) that are sampled from Web of Science (WoS), Scopus and Microsoft Academic (MSA). For each of the 15 universities, we initially collect all DOIs indexed by each of the three bibliographic sources. Subsequently, we randomly sample 40, 30 and 30 DOIs from sets of DOIs that are exclusively indexed by WoS, Scopus and MSA, respectively, for each university. A manual cross-validation process is then followed to validate certain characteristics across the data sources. This cross-validation process was carried out by a data wrangler, on a part-time basis over a few months, for which online data was accessed from 18 December 2018 to 20 May 2019.</p>
Figure 1 from: He L, Liao S, Applequist W, Chen S (2019) The valid publication of Salix suchowensis (Salicaceae). PhytoKeys 131: 27-35. https://doi.org/10.3897/phytokeys.131.37065
Figure 1 Salix suchowensis: C.T. Yang 20640 (NF barcode 04801064!, ♂, isolectotype).
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.