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15,277 results for “GENETICS”
FIGURE 3 in Genetic diversity of the genus Terfezia (Pezizaceae, Pezizales): New species and new record from North Africa
FIGURE 3. Macro- and micromorphological characteristics of Terfezia eliocrocae. a. the steppic habitat with Bedouins desert truffles harvesters. b,c. ascomata collected under Helianthemum salicifolium. d. asci and spores. e–g. ascospores (f,g. scanning electron micrograph). Bars: c = 2 cm, d = 10 μm; e–g = 5 μm.
FIGURE 2 in Genetic diversity of the genus Terfezia (Pezizaceae, Pezizales): New species and new record from North Africa
FIGURE 2. Macro- and microscopic characters of Terfezia crassiverrucosa. a. ascocarp collected under Helianthemum hirtum. b. gleba, cross section. c,d. asci with spores. e–h. ascospores (f–h. scanning electron micrograph). Bars: a–b = 1 cm, c–d = 10 μm, e = 5 μm, f–g = 5 μm, h = 2 μm.
FIGURE 1 in Genetic diversity of the genus Terfezia (Pezizaceae, Pezizales): New species and new record from North Africa
FIGURE 1. Maximum likelihood (ML) tree inferred from the combined ITS and 28S rDNA sequences of Terfezia species with Peziza depressa and Tirmania pinoyi as outgroups. The sequences obtained in the present study are highlighted in bold. The first value on the branches represent the ML bootstrap proportions (≥ 70%) and the value after the slash shows the posterior probability calculated by Bayesian analysis (≥ 0.95). Bar = 1 changes /100 characters.
Multi-omic Mapping of Human Pancreatic Islet Endoplasmic Reticulum and Cytokine Stress Responses Provide Type 2 Diabetes Genetic Insights
<p>The following data accompanying the manuscript can be found here:</p> <ul> <li>Expression (bulk RNA-seq & scRNA-seq) matrices</li> <li>Chromatin accessibility (bulk ATAC-seq) matrices</li> <li>TDF files for IGV browser visualization of cis-regulatory elements</li> </ul>
Data - A Pre-Diagnostic Tool for Familial Mediterranean Fever a Rare Genetic Disorder
<div> <p>Raw data relating the paper titled A Pre-Diagnostic Tool for Familial Mediterranean Fever a Rare Genetic Disorder.</p> <p> </p> </div>
FIG. 3 in Spawning Behavior in a Non-Teleost Actinopterygian: Genetic Evidence for Both Monogamy and Polygamy in Amia
FIG. 3. Mating characteristics of bowfin relative to other nesting species with uniparental male care. Data represented by gray bars are from the review by Coleman and Jones (2011). Bowfin from this study are represented in black. Note that for bowfin relative to other species, the percentage of cuckolded nests is on the low side, that cases of multiple paternity are less common than for many species, and that the mean number of females spawning in a nest is relatively low.
FIG. 2 in Spawning Behavior in a Non-Teleost Actinopterygian: Genetic Evidence for Both Monogamy and Polygamy in Amia
FIG. 2. Bowfin eggs, larva, and fry from Big Bay Creek, New York. (A) Freshly laid bowfin eggs are about 2.2 mm in diameter and white for about the first 24 hrs (photo by Emily Funk using a Nikon D90 camera; scale bar ¼ 5 mm). (B) After about 24 hours, eggs turned greenish gray and are more cryptic (photo by Emily Funk using a Nikon D90 camera; scale bar ¼ 5 mm). (C) Bowfin larva, 7.8 mm long, which is largely translucent except for yolk, eyes, and early pigmentation (photo by Emily Funk using a DP25 camera fitted to an Olympus SZX16 dissection microscope; scale bar ¼ 1 cm). (D) Fully black, free-swimming fry in fry ball. Fry are approximately 40 mm in length (underwater photo by A. McCune using an Olympus Stylus Tough 8000 camera).
FIG. 1 in Spawning Behavior in a Non-Teleost Actinopterygian: Genetic Evidence for Both Monogamy and Polygamy in Amia
FIG. 1. Roving and guarding male bowfin in spawning coloration. (A) Male swimming in Big Bay Creek, New York. Note bright green fins and the prominent ocellus on the caudal peduncle, both characteristic of spawning coloration (photo copyright David O. Brown, using scuba). (B) Male lying on constructed nest with stripped roots (photo by A. McCune using an Olympus Stylus Tough 8000 camera). (C) Male guarding fry on his nest. Black fry are seen in contrast to the brown substrate and are in a round patch underneath the male from approximately the snout to just anterior to the pelvic fins (photo by A. McCune).
Sanger sequencing of target and off-target genomic regions for gene-edited iPSC clones with SETBP1 genetic variants
<p>This data set includes chromatograms generated using sanger sequencing of targeted regions of genomic DNA from clonal iPSC lines. The iPSC lines include clones generated using CRISPR/Cas9 homology directed repair to introduce genetic variants into <em>SETBP1,</em> and their wild-type controls. Additional files have been included in the data set to link chromatogram (ab1) files to specific iPSC clones for genomic regions across the variant in <em>SETBP1 (</em>SETBP1 clones genetic variant sanger sequencing.xslx)<em> </em>and top<em> </em>off-target sites (SETBP1 clones off-target sanger sequencing.xlsx). </p>
Genetic risk score and age at onset
Open the record for dataset details and reuse information.
Figure 6 in Limited genetic depletion despite extinction risk: genomic diversity of a peripheral population of red-spotted bluethroats in Central Europe
Figure 6. Manhattan plots showing SNP levels of ROH per autosome for A, All L. s. svecica individuals, B, Sve_Krk population. The Manhattan plot portrays ROH analysis across 28 autosomes. The height of the peak represents the percentage of individuals sharing homozygous SNP per ROH.
Figure 4 in Limited genetic depletion despite extinction risk: genomic diversity of a peripheral population of red-spotted bluethroats in Central Europe
Figure 4. SNP-based analyses of population structure. A, discriminant analysis of the principal components (DAPC) analysis of genetic structure for two subspecies' genetic clusters (on the left) and, B, for seven populations (on the right). Each colour shade represents subspecies or population genetic clusters, respectively. Every point represents an individual, while inertia ellipses represent 67% of the individuals. Discriminant analysis eigenvalues are displayed by small insets. C, admixture analysis for K = 2. Each vertical bar shows an individual level of shared ancestry between the two subspecies. The two bands below the admixture plot mark individual's subspecies and population affiliation, respectively.
Figure 5 in Limited genetic depletion despite extinction risk: genomic diversity of a peripheral population of red-spotted bluethroats in Central Europe
Figure 5. Pairwise FineRADStructure co-ancestry analysis of 148 genotyped specimens. Ancestral population labels are displayed on the vertical and horizontal axes. Upper horizontal bar stands for subspecies genetic clusters: L. s. svecica—left label, intermediate—centre, L. s. cyanecula—right. Lower horizontal bar depicts population origin if the individuals using the same coding as in Fig. 3.
Figure 3 in Limited genetic depletion despite extinction risk: genomic diversity of a peripheral population of red-spotted bluethroats in Central Europe
Figure 3. The Cytb haplotype network of red-spotted and white-spotted bluethroat populations. Pie charts illustrate the haplotype variants shared among populations. Each circle represents a unique haplotype variant. Sizes of the circles are proportional to the number of individuals. Hatch marks on the branches represent the number of mutational steps that separate haplotypes. Black circles represent hypothetical haplotypes. Red-spotted bluethroat populations are: 1. Krkonoše Mountains (Sve_Krk); 2. Kola (Sve_Klp); 3. Abisko (Sve_Abi). Whitespotted populations are: 1. Třeboňsko (Cya_Trb); 2. St Petersburg (Cya_Stp); 3. Vomáčka (Cya_Vmk); 4. Krkonose Mountains (Cya_Krk). The haplotype marked with the red asterisk is a shared haplotype found in both subspecies.
Figure 1 in Limited genetic depletion despite extinction risk: genomic diversity of a peripheral population of red-spotted bluethroats in Central Europe
Figure 1. Locations of sampled individuals of red-spotted (L. s. svecica) and white-spotted (L. s. cyanecula) bluethroat. L. s. svecica locations: Kola peninsula, Russia (Sve_Klp); Abisko, Sweden (Sve_Abi) and Krkonoše Mountains, Czech Republic (Sve_Krk). L. s. cyanecula locations are: Krkonoše Mountains, Czech Republic (Cya_Krk); Vomáčka, Czech Republic (Cya_Vmk);Třeboňsko, Czech Republic (Cya_Trb) and St. Petersburg, Russia (Cya_Stp). Inset: close-up of the populations in the Czech Republic.
Figure 2 in Limited genetic depletion despite extinction risk: genomic diversity of a peripheral population of red-spotted bluethroats in Central Europe
Figure 2. Box plot comparison of genome-wide heterozygosity by segregating sites at subspecies level (left) and at population level (right). Mean values are marked by a horizontal bar.
Simulation and empirical data for "Unifying approaches from statistical genetics and phylogenetics for mapping phenotypes in structured populations"
<p>Simulation data and empirical data used to generate figures from "Unifying approaches from statistical genetics and phylogenetics for mapping phenotypes in structured populations". Can be used with code provided on the associated github to regenerate the figures. </p>
varCADD: large sets of standing genetic variation enable genome-wide pathogenicity prediction
<p>Data and trained models for the manuscript <em>varCADD: large sets of standing genetic variation enable genome-wide pathogenicity prediction.</em></p>
Identification of genetic loci and functional analysis of candidate gene, OsCycB1;5 associated with seed callus induction in rice (Oryza sativa L.)
Open the record for dataset details and reuse information.
FIGURE 1. A–B. Veltheimia capensis. A in Genetic diversity and species limits in Veltheimia (Asparagaceae: Scilloideae): insights from noncoding cpDNA sequence data
FIGURE 1. A–B. Veltheimia capensis. A. Flowering plant in situ. B. Plant in fruit, also showing the papery tunic at the exposed part of the bulb. C–F. Veltheimia bracteata. C. Yellow form in cultivation. D. Common colour form. E. Striated leaved form from Baviaanskloof. F. Whole plant showing the globose bulb and fleshy scales. Photographs: A, B: L. Mucina; C: J. Sampson; D: T. Dold; E: G. Schafer; F: N. Barker.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.