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6,234 results for “phenotypes”
FIG. 5 in Phenotypic Variation in Brook Trout Salvelinus fontinalis (Mitchill) at Broad Spatial Scales Makes Morphology an Insufficient Basis for Taxonomic Reclassification of the Species
FIG. 5. Representative examples of diverse morphology, particularly in mouth shape and position, observed within a single stream-dwelling Brook Trout population. Fish on the first row display more inferior mouth positions, whereas fish on the last row show more isognathous and prognathic jaws with a terminal/superior mouth position. All fish were captured from Crabtree Creek in the Savage River Watershed of western Maryland (39827047.2500 N, 79812036.0800W). Fish total length is noted in the upper right corner of each photograph. A full description of collection and photography protocols is provided in Kazyak et al. (2015).
FIG. 3 in Phenotypic Variation in Brook Trout Salvelinus fontinalis (Mitchill) at Broad Spatial Scales Makes Morphology an Insufficient Basis for Taxonomic Reclassification of the Species
FIG. 3. Comparison of pored lateral-line scale counts for specimens collected from (A) 38 streams in the Great Smoky Mountains National Park (GSMNP) by Weathers et al. (2019) and (B) three streams surveyed by Stauffer (2020) and three populations described by Stauffer and King (2014) in Long Island, NY. Individual-level data collected by Weathers et al. (2019) are displayed with violin plots, with the width of the violin plot for each stream demonstrating the density of the distribution for a given value and the minimum and maximum values indicated by the tails of the distribution. Due to discrepancies between published and raw data, values from Stauffer (2020) and Stauffer and King (2014) are shown using two methods. Data from the publication appear as the mode(s) (circle) and range (lines), and the raw, individual-level data appear as violin plots. Streams appear on the x-axis by ascending average trait value, and streams included in both Weathers et al. (2019) and Stauffer (2020) are plotted with the same color (Cosby Creek [CS]: yellow; Greenbrier Creek [GB]: green; Indian Camp Creek [ICC]: blue). Data from populations in NY are shown in red and all other sites from GSMNP, TN in gray.
Data Repository: Human iPSC-derived pericyte-like cells carrying LRRK2 mutation induce a reactive phenotype and alters migration (PD lines differentiated with TGFb3)
<p>Data Repository for publication: Human iPSC-derived pericyte-like cells carrying LRRK2 mutation induce a reactive phenotype and alters migration (PD lines differentiated with TGFb3)</p>
Data Repository: Human iPSC-derived pericyte-like cells carrying LRRK2 mutation induce a reactive phenotype and alters migration (Healthy lines differentiated with TGFb3)
<p>Data Repository for publication: Human iPSC-derived pericyte-like cells carrying LRRK2 mutation induce a reactive phenotype and alters migration (Healthy lines differentiated with TGFb3)</p>
Data Repository: Human iPSC-derived pericyte-like cells carrying LRRK2 mutation induce a reactive phenotype and alters migration (Healthy lines differentiated with SB431542)
<p>Data repository for publication: Human iPSC-derived pericyte-like cells carrying LRRK2 mutation induce a reactive phenotype and alters migration (Healthy lines differentiated with SB431542)</p>
Dataset related to the article "Complete phenotype rescue through the restoration of full-length dystrophin using CRISPR/Cas9 genome editing in Duchenne muscular dystrophy patient-derived iPSCs carrying the deletion of two exons."
<p><span>This record contains raw data related to the article Dataset related to the article “Complete phenotype rescue through the restoration of full-length dystrophin using CRISPR/Cas9 genome editing in Duchenne muscular dystrophy patient-derived iPSCs carrying the deletion of two exons".</span></p> <p><span>Here we describe for the first time the restoration of the full-length dystrophin protein, by CRISPR/Cas9, in an iPSC derived from a Duchenne patient carrying the deletion of two exons, allowing the recovery of the cardiac pathological phenotypes and mechanisms, as assessed from the transcriptional, structural, and functional point of view.</span></p>
Clinical and instrumental gait phenotyping in subjects with GLUT-1 deficiency syndrome
<p>This is a cross sectional, case - control study.</p> <p>Thirty-four patients have been screened between January 2023 and April 2024.</p> <p>The final study population consisted of 32 GLUT1DS subjects (13 males, 40.6%).</p> <p>The mean age at clinical onset was 2.6±2.7 years, being the seizures the most common type of clinical onset (26 subjects, 81.2%), followed by movement disorders (3 subjects, 9.4%) and paroxysmal eye movements (3 subjects, 9.4%).<span> </span></p> <p>The age at definitive diagnosis was 13.4±12.0 years.</p> <p>At the study enrolment subjects were cognitively impaired, with a mean IQ of 66.0±20.6. Epilepsy was a common clinical finding in this cohort: 7 (21.9%) subjects were on anti-seizure medication, while 14 (43.7%) had seizures during the past 6 months.</p> <p>The primary objective of the study was to assess the difference in inertial gait analysis between GLUT1DS patients and HS. As co-primary outcomes we considered the Harmonic Ratio value and the short-time maximal Lyapunov’s exponent.</p> <p>As secondary outcomes, we planned to evaluate the difference in values of the other trunk acceleration – derived gait indexes.</p> <p>Since we also performed a comprehensive descriptive phenotyping of gait variables and clinical features of GLUT1DS, we also looked for potential correlations between these features and the instrumental indexes.</p>
FIGURE 13 A–F in Phenotypic studies on terrestrial stigonematacean Cyanobacteria from the Atlantic Rainforest, São Paulo State, Brazil
FIGURE 13 A–F: Stigonema corticola. A: Agglomerations of cells with branches. B, C: Branched filaments. D, E: Details of multiseriate filaments with heterocytes. F: Detail of apex. Scales: 10 µm.
Figure 9 in High level of phenotypic homoplasy amongst eutardigrades (Tardigrada) based on morphological and total evidence phylogenetic analyses
Figure 9. Majority rule phylogram that best fitted current Eutardigrada classification (Marley et al., 2011), obtained with PAUP for parsimonious analyses using the reduced morphological matrix, that is, without any homoplastic characters. Values above branches are parsimonious bootstrap supports after 1000 replicates. Values under branches are Bremer relative supports. Superfamilies with associated claw morphologies and families are indicated.
Figure 6 in High level of phenotypic homoplasy amongst eutardigrades (Tardigrada) based on morphological and total evidence phylogenetic analyses
Figure 6. Maximum clade credibility phylogram obtained with Bayesian inference using the complete morphological matrix without gamete-related characters. Values above branches are posterior probabilities supports. Scale bar indicates nucleotide substitutions per site.
FIGURE 9 in Distinguishing ten sympatric species of fiddler crab (Decapoda: Ocypodidae) using a suite of phenotypic characteristics
FIGURE 9. Paraleptuca crassipes (White, 1847): a–d Sulawesi Tenggara, Indonesia. Adult male colouration; a, large chela; b, carapace dorsal view. Adult female colouration; c, frontal view; d, carapace dorsal view. Photos credit L. Michie. Line drawing of right G1; e, mesial view; f, lateral view; CLSM images of apical part G1; g, mesial view; h, lateral view; SEM images of male gastric mill; i, median tooth plate, ventral view; j, left lateral tooth plate, mesial view.
FIGURE 4 in Distinguishing ten sympatric species of fiddler crab (Decapoda: Ocypodidae) using a suite of phenotypic characteristics
FIGURE 4. Austruca mjoebergi (Rathbun, 1924): a–d Sulawesi Tenggara, Indonesia. Adult male colouration; a, large chela; b, carapace dorsal view. Adult female colouration; c, frontal view; d, carapace dorsal view. Photos credit L. Michie. Line drawing of left G1; e, lateral view; f, mesial view; CLSM images of apical part of G1; g, lateral view; h, mesial view; SEM images of male gastric mill; i, median tooth plate, ventral view; j, left lateral tooth plate, mesial view.
FIGURE 1 in Distinguishing ten sympatric species of fiddler crab (Decapoda: Ocypodidae) using a suite of phenotypic characteristics
FIGURE 1. The Wakatobi National Park, southeast Sulawesi, Indonesia; a, Indonesia, showing Sulawesi; b, the four main islands of the Wakatobi National Park; Wangi-Wangi, Kaledupa, Tomea and Binongko; c, Kaledupa Island, indicating Ambeua.
FIGURE 8 in Distinguishing ten sympatric species of fiddler crab (Decapoda: Ocypodidae) using a suite of phenotypic characteristics
FIGURE 8. Gelasimus tetragonon (Herbst, 1790): a–d Sulawesi Tenggara, Indonesia. Adult male colouration; a, large chela; b, carapace dorsal view. Adult female colouration; c, frontal view; d, carapace dorsal view. Photos credit L. Michie. Line drawing of left G1; e, lateral view; f, mesial view; CLSM images of apical part of G1; g, lateral view; h, mesial view; SEM images of male gastric mill; i, median tooth plate, ventral view; j, left lateral tooth plate, mesial view.
FIGURE 7. Gelasimus jocelynae H.-T in Distinguishing ten sympatric species of fiddler crab (Decapoda: Ocypodidae) using a suite of phenotypic characteristics
FIGURE 7. Gelasimus jocelynae H.-T. Shih, Naruse and P.K.L. Ng, 2010: a–d Sulawesi Tenggara, Indonesia. Adult male colouration; a, large chela; b, carapace dorsal view. Adult female colouration; c, frontal view; d, carapace dorsal view. Photos credit L. Michie. Line drawing of right G1; e, mesial view; f, lateral view; CLSM images of apical part of G1; g, mesial view; h, lateral view; SEM photos of male gastric mill; i, median tooth plate, ventral view; j, left lateral tooth plate, mesial view.
FIGURE 5. Austruca perplexa H. Milne Edwards, 1852 in Distinguishing ten sympatric species of fiddler crab (Decapoda: Ocypodidae) using a suite of phenotypic characteristics
FIGURE 5. Austruca perplexa H. Milne Edwards, 1852: a–d Sulawesi Tenggara, Indonesia. Adult male colouration; a, large chela; b, carapace dorsal view. Adult female colouration; c, frontal view; d, carapace dorsal view. Photos credit L. Michie. Line drawing of right G1; e, mesial view; f, lateral view; CLSM images of apical part of G1; g, mesial view; h, lateral view; SEM images of male gastric mill; i, median tooth plate, ventral view; j, left lateral tooth plate, mesial view.
Figure 3 in Repeated colonization of caves leads to phenotypic convergence in catfishes (Siluriformes: Trichomycterus) at a small geographical scale
Figure 3. Relationships among catfish in Trichomycterus and other genera reveal repeated colonization of caves and phenotypic convergence in the karst region of Santander, Colombia. The Bayesian gene tree on the left is an overview of phylogeny based on sequences of the COI gene (outgroups not shown). Colours at the tips indicate whether specimens were collected in the western slope of the Eastern Andes of Santander, whether they were found in cave habitats, and whether they lacked eyes or body pigmentation (i.e. troglomorphism). Strongly supported nodes (posterior probability ≥ 0.95, maximum likelihood bootstrap ≥ 70%) relevant to the phylogenetic position of specimens from Santander are indicated with circles; numbered nodes are mentioned in the text and panels on the right. Node 1 defines a clade formed
ECOBREED WP5 T5.1 Phenotypic data of buckwheat genetic resources
<p>Phenotypic evaluation of the ECOBREED WP5 buckwheat collection in Austria (2019-2021), Czech Republic (2019-2021), Slovenia (2019-2021) and USA (2020-2021). Field data and quality analyses are available in separate files for the individual countries of testing; data from the individual years are in separate sheets within each file.</p>
Figure 3 in Subspecies at crossroads: the evolutionary significance of genomic and phenotypic variation in a wide-ranging Australian lizard (Ctenotus pantherinus)
Figure 3. Geographical distribution of the characters proposed to diagnose subspecies in Ctenotus pantherinus. The top left panel indicates the presumed ranges of the four subspecies as in Figure 1B: C. p. acripes (a), C. p. calx (c), C. p. ocellifer (o) and C. p. pantherinus (p). For the quantitative characters (remaining left panels), colours of circles indicate average trait values in a locality. Juveniles (<75 mm) were not included in the snout–vent length map. For the qualitative characters (right panels), pie charts indicate the relative frequency of alternative character states in a locality. Some character states tended to be more frequent in certain regions, yet many specimens deviated from these regional trends.
Figure 5 in Subspecies at crossroads: the evolutionary significance of genomic and phenotypic variation in a wide-ranging Australian lizard (Ctenotus pantherinus)
Figure 5. Phylogenetic relationships in Ctenotus pantherinus and geographical distribution of inferred clades. A, phylogenetic tree based on a dataset including 85 743 nuclear single nucleotide polymorphisms from a double-digest restriction site-associated data (ddRAD) approach. B, tree based on the cytochrome b mitochondrial marker. Asterisks indicate samples from the type locality of C. p. acripes, a taxon that we deem invalid (see main text). C, geographical distributions of major nuclear clades. D, distributions of major mitochondrial clades. Nuclear and mitochondrial trees show multiple points of discordance and limited correspondence to putative population assignments to subspecies.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.