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6,467 results for “process”
Processed RNA-seq STAR Salmon outputs
The raw data is contributed by Johns Hopkins University researchers funded by the Neurofibromatosis Therapeutic Acceleration Program (NTAP). The reprocessing of the raw data is managed by the NF Open Science Initiative (NF Data Portal).
Processed Somatic Variants - Strelka Pipeline
The raw data is contributed by Johns Hopkins University researchers funded by the Neurofibromatosis Therapeutic Acceleration Program (NTAP). The reprocessing of the raw data is managed by the NF Open Science Initiative (NF Data Portal).
Processed Somatic Genomic Variants - Mutect2 Pipeline
The raw data is contributed by Johns Hopkins University researchers funded by the Neurofibromatosis Therapeutic Acceleration Program (NTAP). The reprocessing of the raw data is managed by the NF Open Science Initiative (NF Data Portal).
Influence of manufacturing processes on cell surface properties of probiotic strain Lactobacillus rhamnosus Lcr35®
GEO Series GSE58820. Lacticaseibacillus rhamnosus; Lactobacillus. 9 samples. Type: Expression profiling by array.
Nd isotopes reveal the human-induced change of sediment routing processes in the Huanghe (Yellow River) catchment
<p>Table A1. Sampling locations, Nd isotopes, geochemical compositions and grain size parameters of Huanghe and loess sediments investigated.</p> <p>Table A2. Annual water discharge and sediment load at major gauging stations along the Huanghe mainstream.</p> <p>Table A3. Nd isotopic compositions of major tectonic terranes and sources in the Huanghe basin (literature data).</p> <p>Table A4. Nd isotopes and geochemical compositions of rocks in the North China Craton.</p> <p>Table A5. Nd model ages of rocks from North China Craton (NCC), only rocks with Th/Sc, Th/Cr, Th/Co and Sm/Nd ratios within the range of references for UCC in the NCC have been selected.</p> <p>Table A6. Nd isotopes mixing of sediments from the lower Huanghe.</p>
When prosody meets syntax: The processing of the syntax-prosody interface in children with developmental dyslexia and developmental language disorder.
<p>Dataset containing the raw scores obtained at the various experimental and standardized tests by the three groups of children described in the paper "When prosody meets syntax: The processing of the syntax-prosody interface in children with developmental dyslexia and developmental language disorder. <em>Lingua</em>, <a href="https://doi.org/10.1016/j.lingua.2019.03.008">https://doi.org/10.1016/j.lingua.2019.03.008</a></p>
Numerical data sets pertaining to phase-field simulations of faceted crystal dissolution processes
<p>The numerical data in this repository (Archive.zip + Animation.zip) pertains to the simulation results of faceted crystal dissolution processes in different crystal-liquid systems. The simulations were performed using the software package named "Pace3D version 2.5.1". The software license can be purchased at Steinbeis Network (www.steinbeis.de) in the management of Britta Nestler and Michael Selzer under the subject area ‘Material Simulation and Process Optimization’. </p> <p><br> The data is organized, the way it appears in the figures in the manuscript. Thus, the folders (compressed) are named according to the figure number in the manuscript.</p> <ul> <li>For the sake of convenience, the simulation data at intermediate dissolution stages was converted from Pace3D output format (*.phiindex.p3s and *.phi_crystal.p3s) to VTK data format, that can be visualized using open source software packages like Paraview. The VTK data files in each subfolder are also compressed (*.gz). For visualization, a decompression of the data is necessary (e.g. with gzip, 7zip).</li> <li>The animation videos of the simulations are also attached as a separate compressed file named Animation.zip.</li> </ul>
Data Processing for a Small-Scale Long-Term Coastal Ocean Observing System Near Mobile Bay, Alabama: A Geoscience Papers of the Future (GPF) Workflow Diagram
<p>The Dauphin Island Sea Lab (DISL) has been operating a permanent moored oceanographic station at 30 05.410'N, 88 12.694'W, 25 km southwest of the entrance to Mobile Bay, Alabama, since 2004. It collects hydrographic and current velocity data.</p> <p>This diagram shows the processing steps for data from the instruments at this mooring, from initial download to initial scientific analysis.</p> <p>The file has been prepared as supplementary material for a Geoscience Paper of the Future (GPF) in prep for publication at Earth and Space Science, as part of the OntoSoft GPF Initiative.</p>
ADHD200 preprocessed regional time series processed with NIAK and the ROI1000 brain parcellation
<p>See README.md.</p>
Dataset related to article "Connecting the use of innovative treatments and glucocorticoids with the multidisciplinary evaluation through rule-based natural-language processing: a real-world study on patients with rheumatoid arthritis, psoriatic arthritis, and psoriasis"
<p>This record contains raw data related to article "Connecting the use of innovative treatments and glucocorticoids with the multidisciplinary evaluation through rule-based natural-language processing: a real-world study on patients with rheumatoid arthritis, psoriatic arthritis, and psoriasis"</p><p>Abstract</p><p>Background: The impact of a multidisciplinary management of rheumatoid arthritis (RA), psoriatic arthritis (PsA), and psoriasis on systemic glucocorticoids or innovative treatments remains unknown. Rule-based natural language processing and text extraction help to manage large datasets of unstructured information and provide insights into the profile of treatment choices.</p><p>Methods: We obtained structured information from text data of outpatient visits between 2017 and 2022 using regular expressions (RegEx) to define elastic search patterns and to consider only affirmative citation of diseases or prescribed therapy by detecting negations. Care processes were described by binary flags which express the presence of RA, PsA and psoriasis and the prescription of glucocorticoids and biologics or small molecules in each cases. Logistic regression analyses were used to train the classifier to predict outcomes using the number of visits and the other specialist visits as the main variables.</p><p>Results: We identified 1743 patients with RA, 1359 with PsA and 2,287 with psoriasis, accounting for 5,677, 4,468 and 7,770 outpatient visits, respectively. Among these, 25% of RA, 32% of PsA and 25% of psoriasis cases received biologics or small molecules, while 49% of RA, 28% of PsA, and 40% of psoriasis cases received glucocorticoids. Patients evaluated also by other specialists were treated more frequently with glucocorticoids (70% vs. 49% for RA, 60% vs. 28% for PsA, 51% vs. 40% for psoriasis; p < 0.001) as well as with biologics/small molecules (49% vs. 25% for RA, 64% vs. 32% in PsA; 51% vs. 25% for psoriasis; p < 0.001) compared to cases seen only by the main specialist.</p><p>Conclusion: Patients with RA, PsA, or psoriasis undergoing multiple evaluations are more likely to receive innovative treatments or glucocorticoids, possibly reflecting more complex cases.</p><p> </p>
Supplementary Material for "Assessing the Impact of Groundwater Saturation Excess Runoff on Hydrologic Features and Processes in a Watershed Modeling Setting"
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Observational data and processing results
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Repetitive Transcranial Magnetic Stimulation of the human motor cortex modulates processing of heat pain sensation as assessed by the offset analgesia paradigm
<p>Heat pain threshold (HPT) values and Visual Analogue Scale (VAS) values recorded during a constant trial and an offset analgesia trial recorded at baseline and after active or sham repetitive Transcranial Magnetic Stimulation (rTMS). T1, T2 and T3 indicate different time intervals of OA trial, i.e., T1 = first 5 s interval of the individualized HPT, T2 = 5 s interval at a temperature 1 ˚C higher than T1, T3 = 20 s interval at the same temperature as T1. Constant trial included 30 s of a stimulus at HPT.</p>
Observed data and processing results
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Observational data and processing results
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Processed data for Yost*, Zhao*, et al.
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Dataset for testing MapMet Image Processing pipeline
<p>This is a test dataset for the image processing pipeline of the MapMet project. </p>
ESI_Electrifying Freight-Modeling the Decision Making Process for Battery Electric Truck Procurement
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Zebrafish (Danio rerio) Social Preference | Set 1 | PRE INTERVENTION | Processed, Acclam
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ESI_Electrifying Freight-Modeling the Decision Making Process for BET Procurement
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.