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Supplementary material 1 from: Wiemers M, Chazot N, Wheat CW, Schweiger O, Wahlberg N (2020) A complete time-calibrated multi-gene phylogeny of the European butterflies. ZooKeys 938: 97-124. https://doi.org/10.3897/zookeys.938.50878
Table listing of European butterfly species with higher taxonomy, voucher codes and accession numbers for the sequences used to build the phylogeny.
Electroencephalography of completely locked-in state patients with amyotrophic lateral sclerosis
<p>The data set includes raw EEG data for 10 completely locked-in state (CLIS) patients with amyotrophic lateral sclerosis (ALS) and 6 healthy participants. The EEG data were recorded during resting state and the reference was right mastoid. This data was used in the publication https://doi.org/10.1016/j.neures.2020.01.013.</p>
III Average nucleotide distances (%) based on the Kimura 2-parameter (K2P) model between Aselliscus spp., and associated outgroups based on complete mitochondrial Cytb (1,140 bp, below the diagonal) and COI (657 bp, above the diagonal) gene sequences in Description of a new species of the genus Aselliscus (Chiroptera, Hipposideridae) from Vietnam
III Average nucleotide distances (%) based on the Kimura 2-parameter (K2P) model between Aselliscus spp., and associated outgroups based on complete mitochondrial Cytb (1,140 bp, below the diagonal) and COI (657 bp, above the diagonal) gene sequences
Dataset for CHISEL complete demo on chromosome 6
<p>This dataset contains all the files required for the complete demo of CHISEL on chromosome 6. Specifically, the files included here are:</p> <ol> <li>`cells.bam` barcoded BAM file (using flag `CB:Z:[A,C,G,T]+`) for 100 tumor single cells;</li> <li>`cells.bam.bai` index of the barcoded BAM file;</li> <li>`normal.bam` matched-normal BAM file for the 100 tumor single cells;</li> <li>`normal.bam.bai` index of the matched-normal BAM file.</li> <li>'phases.tsv' tab-separated dataframe with phases of germline SNPs, with fields `CHROMOSOME POS PHASE`</li> </ol>
SCDNA: a serially complete precipitation and temperature dataset in North America from 1979 to 2018 (Version 1.1)
<p>Version updates:</p> <p>Version 1.1 is generally consistent with Version 1 in data estimation but (1) provides source flags in the final dataset, (2) adds individual station files for every merged station, and (3) excludes some stations due to their quality problems.</p> <p>Station-based serially complete datasets (SCDs) of precipitation and temperature observations are important for hydrometeorological studies. We developed a SCD for North America (SCDNA) of precipitation, minimum temperature, and maximum temperature from 1979 to 2018. Raw meteorological station data were obtained from the Global Historical Climate Network Daily (GHCN-D), the Global Surface Summary of the Day (GSOD), Environment and Climate Change Canada (ECCC), and a compiled station database in Mexico (Livneh et al. 2015).</p> <p>There are three types of missing values that are infilled/reconstructed by this dataset:</p> <ol> <li>Missing value during the observation period when the station still works.</li> <li>Missing value beyond the observation period (reconstruction period) before the station is deployed or after the station ceases working.</li> <li>Station measurements that fail quality control checks are treated as missing values and imputed.</li> </ol> <p>This dataset is useful for various purposes of applications that require:</p> <ol> <li>Quality-controlled actual station observations from multiple datasets in North America;</li> <li>Station observations without missing values in the observation period;</li> <li>Serially complete station observations. Users should be cautious when using this dataset for trend analysis because it is possible that trends are not well reconstructed.</li> </ol> <p>Three types of dataset files are provided:</p> <ol> <li>“SCDNA_v1.1.nc4”. This NetCDF file contains basic information (ID, location, elevation) and the final variables of stations. For each variable (precipitation, minimum temperature, and maximum temperature), this file provides the serially complete data, the estimation flag indicating whether a value is from observation or estimation, and accuracy index (KGE) of estimated data.</li> <li>“SCD_complete_part1.zip” to “SCD_complete_part10.zip”. These ten compressed files contain complete data for the production of the SCD, including quality flags, estimates from 16 strategies (quantile mapping, interpolation, machine learning, and multiple-strategy merging), corrected/uncorrected SCD estimates, accuracy indices, etc.</li> <li>"overlap_station.zip". This file contains the list and data of stations that have the same latitude and longitude records due to various reasons, such as the same stations from different sources, naming rules, recording bias, etc, network design, etc.</li> </ol> <p>We recommend that users download "SCDNA_v1.1.nc4" for quick and direct application, and adopt the second type for in-depth investigation of different strategies and potential methodology improvement. Please refer to Readme.txt for more details.</p> <p>The codes used to produce this dataset are available on GitHub (<a href="https://github.com/tgq14/GapFill">https://github.com/tgq14/GapFill</a>).</p>
FIGS. 198–203. Complicatella spp. Figs. 198–201. Complicatella pectenifera. Fig. 198. Anterior gonopods, posterior view. Fig. 199. Posterior gonopods, posterior view. Fig. 200 in The millipede family Conotylidae in northwestern North America, with a complete bibliography of the family (Diplopoda, Chordeumatida, Heterochordeumatidea, Conotyloidea)
FIGS. 198–203. Complicatella spp. Figs. 198–201. Complicatella pectenifera. Fig. 198. Anterior gonopods, posterior view. Fig. 199. Posterior gonopods, posterior view. Fig. 200. Left posterior gonopod coxite and prefemur, posterior view. Fig. 201. Right posterior gonopod coxite, posterior view. Figs. 202, 203. Complicatella neili. Fig. 202. Anterior gonopods, posterior view. Fig. 203. Left posterior gonopod coxite, posterior view.
FIGS. 194–197. Complicatella spp. Figs. 194, 195. Complicatella pectenifera. Fig. 194. Anterior gonopods, posterior view. Fig. 195. Left posterior gonopod coxite, posterior view. Figs. 196, 197. Complicatella neili. Fig. 196. Anterior gonopods, posterior view. Fig. 197 in The millipede family Conotylidae in northwestern North America, with a complete bibliography of the family (Diplopoda, Chordeumatida, Heterochordeumatidea, Conotyloidea)
FIGS. 194–197. Complicatella spp. Figs. 194, 195. Complicatella pectenifera. Fig. 194. Anterior gonopods, posterior view. Fig. 195. Left posterior gonopod coxite, posterior view. Figs. 196, 197. Complicatella neili. Fig. 196. Anterior gonopods, posterior view. Fig. 197. Left posterior gonopod coxite, posterior view.
FIGS. 173–189. Brunsonia spp. Figs. 173–179. Brunsonia chelanomagna. Fig. 173. Right anterior gonopod, lateral view. Fig. 174. Left posterior gonopod coxite, posterior view. Figs. 175–179. Male legs 3–7, respectively. Figs. 180, 181. Brunsonia selwayana. Fig. 180. Right anterior gonopod, posteriolateral view. Fig. 181. Left posterior gonopod coxite, posterior view. Figs. 182–189. Brunsonia benewah. Fig. 182. Anterior gonopods, posterior view. Fig. 183 in The millipede family Conotylidae in northwestern North America, with a complete bibliography of the family (Diplopoda, Chordeumatida, Heterochordeumatidea, Conotyloidea)
FIGS. 173–189. Brunsonia spp. Figs. 173–179. Brunsonia chelanomagna. Fig. 173. Right anterior gonopod, lateral view. Fig. 174. Left posterior gonopod coxite, posterior view. Figs. 175–179. Male legs 3–7, respectively. Figs. 180, 181. Brunsonia selwayana. Fig. 180. Right anterior gonopod, posteriolateral view. Fig. 181. Left posterior gonopod coxite, posterior view. Figs. 182–189. Brunsonia benewah. Fig. 182. Anterior gonopods, posterior view. Fig. 183. Tip of left anterior gonopod, posterior view. Fig. 184. Left posterior gonopod coxite, posterior view. Figs. 185–189. Male legs 3–7, respectively.
FIGS. 170–172. Brunsonia chelanoparva. Fig. 170. Anterior gonopods, posterior view. Fig. 171 in The millipede family Conotylidae in northwestern North America, with a complete bibliography of the family (Diplopoda, Chordeumatida, Heterochordeumatidea, Conotyloidea)
FIGS. 170–172. Brunsonia chelanoparva. Fig. 170. Anterior gonopods, posterior view. Fig. 171. Detail of right anterior gonopod, ventral view. Fig. 172. Right posterior gonopod coxite, posterior view.
FIGS. 161–169. Brunsonia spp. Figs. 161–167. Brunsonia wenatchee. Fig. 161. Anterior gonopods, anterior view. Fig. 162. Left posterior gonopod, posterior view. Figs. 163–167. Male legs 3–7, respectively. Figs. 168, 169. Brunsonia chelanoparva. Fig. 168. Left anterior gonopod, posterior view. Fig. 169 in The millipede family Conotylidae in northwestern North America, with a complete bibliography of the family (Diplopoda, Chordeumatida, Heterochordeumatidea, Conotyloidea)
FIGS. 161–169. Brunsonia spp. Figs. 161–167. Brunsonia wenatchee. Fig. 161. Anterior gonopods, anterior view. Fig. 162. Left posterior gonopod, posterior view. Figs. 163–167. Male legs 3–7, respectively. Figs. 168, 169. Brunsonia chelanoparva. Fig. 168. Left anterior gonopod, posterior view. Fig. 169. Right posterior gonopod coxite, posterior view.
FIGS. 190–193. Brunsonia chelanomagna and Complicatella complicata. Figs. 190, 191. Brunsonia chelanomagna. Fig. 190. Anterior gonopods, posterior view. Fig. 191. Left posterior gonopod coxite, posterior view. Figs. 192–193. Complicatella complicata. Fig. 192. Left anterior gonopod, posterior view. Fig. 193 in The millipede family Conotylidae in northwestern North America, with a complete bibliography of the family (Diplopoda, Chordeumatida, Heterochordeumatidea, Conotyloidea)
FIGS. 190–193. Brunsonia chelanomagna and Complicatella complicata. Figs. 190, 191. Brunsonia chelanomagna. Fig. 190. Anterior gonopods, posterior view. Fig. 191. Left posterior gonopod coxite, posterior view. Figs. 192–193. Complicatella complicata. Fig. 192. Left anterior gonopod, posterior view. Fig. 193. Posterior gonopod coxites, posterior view.
FIGS. 159, 160. Brunsonia wenatchee. Fig. 159. Left anterior gonopod, mesoposterior view. Fig. 160 in The millipede family Conotylidae in northwestern North America, with a complete bibliography of the family (Diplopoda, Chordeumatida, Heterochordeumatidea, Conotyloidea)
FIGS. 159, 160. Brunsonia wenatchee. Fig. 159. Left anterior gonopod, mesoposterior view. Fig. 160. Right posterior gonopod coxite, posterior view.
FIGS. 144–154. Brunsonia spp. Figs. 145–152. Brunsonia pulchra. Figs. 144–146. Anterior gonopods. Fig. 144. Anterior view. Fig. 145. Posterior view. Fig. 146. Mesal view. Fig. 147. Left posterior gonopod coxite, posterior view. Figs. 148–152. Male legs 3–7, respectively. Figs. 153, 154. Brunsonia digitata. Fig. 153. Left anterior gonopod, posterior view. Fig. 154 in The millipede family Conotylidae in northwestern North America, with a complete bibliography of the family (Diplopoda, Chordeumatida, Heterochordeumatidea, Conotyloidea)
FIGS. 144–154. Brunsonia spp. Figs. 145–152. Brunsonia pulchra. Figs. 144–146. Anterior gonopods. Fig. 144. Anterior view. Fig. 145. Posterior view. Fig. 146. Mesal view. Fig. 147. Left posterior gonopod coxite, posterior view. Figs. 148–152. Male legs 3–7, respectively. Figs. 153, 154. Brunsonia digitata. Fig. 153. Left anterior gonopod, posterior view. Fig. 154. Left posterior gonopod coxite, posterior view.
FIGS. 141–143. Brunsonia pulchra. Fig. 141. Posterior gonopod coxites, posterior view. Fig. 142. Right anterior gonopod, lateral view. Fig. 143 in The millipede family Conotylidae in northwestern North America, with a complete bibliography of the family (Diplopoda, Chordeumatida, Heterochordeumatidea, Conotyloidea)
FIGS. 141–143. Brunsonia pulchra. Fig. 141. Posterior gonopod coxites, posterior view. Fig. 142. Right anterior gonopod, lateral view. Fig. 143. Detail of left anterior gonopod, mesal view.
FIGS. 121–135. Brunsonia albertana. Figs. 121–126. Form from Spokane, Washington. Fig. 121. Anterior gonopods, posterior view. Fig. 122. Right posterior gonopod coxite, posterior view. Figs. 123–127. Male legs 3–7, respectively. Figs. 128–135 in The millipede family Conotylidae in northwestern North America, with a complete bibliography of the family (Diplopoda, Chordeumatida, Heterochordeumatidea, Conotyloidea)
FIGS. 121–135. Brunsonia albertana. Figs. 121–126. Form from Spokane, Washington. Fig. 121. Anterior gonopods, posterior view. Fig. 122. Right posterior gonopod coxite, posterior view. Figs. 123–127. Male legs 3–7, respectively. Figs. 128–135. Form from Umatilla Co., Oregon. Fig. 128. Left anterior gonopod, posterior view. Fig. 129. Right posterior gonopod coxite, posterior view. Figs. 130–135. Male legs 3–7, respectively.
FIGS. 109–112. Karagama ladybird and Bollmanella bombus. Figs. 109, 110. Karagama ladybird. Fig. 109. Anterior gonopods, posterior view. Fig. 110. Right posterior gonopod coxite, posterior view. Figs. 111, 112. Bollmanella bombus. Fig. 111. Anterior gonopods, posterior view. Fig. 112 in The millipede family Conotylidae in northwestern North America, with a complete bibliography of the family (Diplopoda, Chordeumatida, Heterochordeumatidea, Conotyloidea)
FIGS. 109–112. Karagama ladybird and Bollmanella bombus. Figs. 109, 110. Karagama ladybird. Fig. 109. Anterior gonopods, posterior view. Fig. 110. Right posterior gonopod coxite, posterior view. Figs. 111, 112. Bollmanella bombus. Fig. 111. Anterior gonopods, posterior view. Fig. 112. Right posterior gonopod, posterior view.
FIG. 89–99. Ovaskella spp. Figs. 89–91. Ovaskella ovaskae. Fig. 89. Anterior gonopods, posterior view. Fig. 90. Left posterior gonopod, posterior view. Fig. 91. Left posterior gonopod coxite, posterior view. Figs. 92–99. Ovaskella sinuosa. Fig. 92. Right anterior gonopod, posterior view. Fig. 93. Right posterior gonopod coxite, posterior view. Fig. 94 in The millipede family Conotylidae in northwestern North America, with a complete bibliography of the family (Diplopoda, Chordeumatida, Heterochordeumatidea, Conotyloidea)
FIG. 89–99. Ovaskella spp. Figs. 89–91. Ovaskella ovaskae. Fig. 89. Anterior gonopods, posterior view. Fig. 90. Left posterior gonopod, posterior view. Fig. 91. Left posterior gonopod coxite, posterior view. Figs. 92–99. Ovaskella sinuosa. Fig. 92. Right anterior gonopod, posterior view. Fig. 93. Right posterior gonopod coxite, posterior view. Fig. 94. Tip of right posterior gonopod coxite, posterior view. Figs. 95–99. Male legs 3–7, respectively.
FIGS. 30–44. Taiyutyla amicitia and Calityla siskiyou. Figs. 30–36. Taiyutyla amcitia. Fig. 30. Anterior gonopods, posterior view. Fig. 31. Left posterior gonopod coxite, posterior view. Figs. 32–36. Male legs 3–7, respectively. Figs. 37–44. Calityla siskiyou. Fig. 37. Anterior gonopods, posterior view. Fig. 38. Right posterior gonopod coxite, posterior view. Fig. 39 in The millipede family Conotylidae in northwestern North America, with a complete bibliography of the family (Diplopoda, Chordeumatida, Heterochordeumatidea, Conotyloidea)
FIGS. 30–44. Taiyutyla amicitia and Calityla siskiyou. Figs. 30–36. Taiyutyla amcitia. Fig. 30. Anterior gonopods, posterior view. Fig. 31. Left posterior gonopod coxite, posterior view. Figs. 32–36. Male legs 3–7, respectively. Figs. 37–44. Calityla siskiyou. Fig. 37. Anterior gonopods, posterior view. Fig. 38. Right posterior gonopod coxite, posterior view. Fig. 39. Tip of right posterior gonopod coxite, posterior view. Figs. 40–44. Male legs 3–7, respectively.
FIGS. 68–84. Calityla spp. Figs. 68–74. Calityla essigi. Fig. 68. Left posterior gonopod coxite, posterior view. Fig. 69 in The millipede family Conotylidae in northwestern North America, with a complete bibliography of the family (Diplopoda, Chordeumatida, Heterochordeumatidea, Conotyloidea)
FIGS. 68–84. Calityla spp. Figs. 68–74. Calityla essigi. Fig. 68. Left posterior gonopod coxite, posterior view. Fig. 69. Tip of left posterior gonopod coxite, posterior view. Figs. 70–74. Male legs 3–7, respectively. Figs. 75–85. Calityla humboldtensis. Fig. 75. Anterior gonopods, posterior view. Fig. 76. Posterior gonopods, posterior view. Fig. 77. Tip of left posterior gonopod coxite, posterior view. Figs. 78–82. Male legs 3–7, respectively. Fig. 83. Male leg 10. Fig. 84. Male leg 11. Fig. 85. Femoral knob of male leg 7.
FIGS. 26–29. Taiyutyla spp. Fig. 26 in The millipede family Conotylidae in northwestern North America, with a complete bibliography of the family (Diplopoda, Chordeumatida, Heterochordeumatidea, Conotyloidea)
FIGS. 26–29. Taiyutyla spp. Fig. 26. Taiyutyla acuphora, right posterior gonopod coxite, posterior view. Figs. 27–29. Taiyutyla amicitia. Fig. 27. Tip of right anterior gonopod, lateral view. Fig. 28. Left anterior gonopod, mesal view. Fig. 29. Right posterior gonopod coxite, posterior view.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.