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FIGURE 19.Metopa borealis Sars, 1883 in A redescription of Metopa species (Amphipoda, Stenothoidae) based on the type material. 3. Natural History Museum, Oslo (NHM) 2465
FIGURE 19.Metopa borealis Sars, 1883, photo of F13738 syntype, female 4 mm (A), male 4 mm (B).
FIGURE 24. Metopa invalida Sars, 1892 in A redescription of Metopa species (Amphipoda, Stenothoidae) based on the type material. 3. Natural History Museum, Oslo (NHM) 2465
FIGURE 24. Metopa invalida Sars, 1892, female, 4 mm, F13733: whole animal. Scale bar is 0.5mm.
Supplementary material 1 from: Satmari A, Miok K, Ion MC, Zaharia C, Schrimpf A, Pârvulescu L (2023) Headwater refuges: Flow protects Austropotamobius crayfish from Faxonius limosus invasion. NeoBiota 89: 71-94. https://doi.org/10.3897/neobiota.89.110085
Hyperparameter tuning using Grid Search
Fig. 20 in Quaternary Murid Rodents Of Timor Part I: New Material Of Coryphomys Buehleri Schaub, 1937, And Description Of A Second Species Of The Genus
Fig. 20. Hypothesis of phylogenetic relationships among the major lineages of Murinae, based on the findings of recent molecular studies of multiple mitochondrial and nuclear genes (Michaux et al. 2001; Lecompte et al., 2002a, 2008; Jansa and Weksler, 2004; Jansa et al., 2006; Steppan et al., 2004; Rowe et al., 2008). Branch lengths are scaled according to the chronogram presented by Lecompte et al. (2008: fig. 2). The placement of Chiropodomys and Vandeleuria on this topology is based on the multigene phylogeny published by Rowe et al. (2008); branch lengths for these placements are approximate. The taxonomic content of each Tribe is summarized in table 3.
Supplementary material 1 from: Díaz-Hernández JA, Ugalde-Silva P, Berriozabal-Islas C, Novelo A, Hernández-Uc J, Arana-May A, Pech-Patrón SD, Nava-Jiménez IA, Borbolla-Vázquez J (2023) Aquatic microdiversity from urban cenotes in Cancun, Quintana Roo, Mexico. Subterranean Biology 46: 129-145. https://doi.org/10.3897/subtbiol.46.108082
Kinds of cenotes sampled
Supplementary material 2 from: Schneider AS, Knüsel M, Altermatt F (2023) Assessment of occurrence, diversity, and biomass of macroinvertebrates in Swiss groundwater systems using citizen science data. Subterranean Biology 46: 147-164. https://doi.org/10.3897/subtbiol.46.112569
Detailed procedure for macroinvertebrate bio-area measurements
Supplementary material 3 from: Schneider AS, Knüsel M, Altermatt F (2023) Assessment of occurrence, diversity, and biomass of macroinvertebrates in Swiss groundwater systems using citizen science data. Subterranean Biology 46: 147-164. https://doi.org/10.3897/subtbiol.46.112569
Supplementary results
Supplementary material 1 from: Schneider AS, Knüsel M, Altermatt F (2023) Assessment of occurrence, diversity, and biomass of macroinvertebrates in Swiss groundwater systems using citizen science data. Subterranean Biology 46: 147-164. https://doi.org/10.3897/subtbiol.46.112569
Bio-area and biomass relationship
Supplementary material 5 from: Praz C, Müller A, Bénon D, Herrmann M, Neumeyer R (2023) Annotated checklist of the Swiss bees (Hymenoptera, Apoidea, Anthophila): hotspots of diversity in the xeric inner Alpine valleys. Alpine Entomology 7: 219-267. https://doi.org/10.3897/alpento.7.112514
Distance-based tree
Supplementary material 4 from: Praz C, Müller A, Bénon D, Herrmann M, Neumeyer R (2023) Annotated checklist of the Swiss bees (Hymenoptera, Apoidea, Anthophila): hotspots of diversity in the xeric inner Alpine valleys. Alpine Entomology 7: 219-267. https://doi.org/10.3897/alpento.7.112514
Checklist of the Swiss bees and presence of each species in each canton
Supplementary material 3 from: Praz C, Müller A, Bénon D, Herrmann M, Neumeyer R (2023) Annotated checklist of the Swiss bees (Hymenoptera, Apoidea, Anthophila): hotspots of diversity in the xeric inner Alpine valleys. Alpine Entomology 7: 219-267. https://doi.org/10.3897/alpento.7.112514
Locality, collection data and BOLD accession numbers for specimens sequenced in this study
Supplementary material 2 from: Praz C, Müller A, Bénon D, Herrmann M, Neumeyer R (2023) Annotated checklist of the Swiss bees (Hymenoptera, Apoidea, Anthophila): hotspots of diversity in the xeric inner Alpine valleys. Alpine Entomology 7: 219-267. https://doi.org/10.3897/alpento.7.112514
Primers used to amplify and sequence the mitochondrial gene Cytochrome oxidase I
Supplementary material 1 from: Praz C, Müller A, Bénon D, Herrmann M, Neumeyer R (2023) Annotated checklist of the Swiss bees (Hymenoptera, Apoidea, Anthophila): hotspots of diversity in the xeric inner Alpine valleys. Alpine Entomology 7: 219-267. https://doi.org/10.3897/alpento.7.112514
Locality labels from important historical bee collections in Switzerland
Supplmental Material
Open the record for dataset details and reuse information.
MALDI-ToF-MS spectra of Late Pleistocene fossil material from Australia for ZooMS
<p>MALDI-TOF-MS spectra for Late Pleistocene fossil material from Australia. All spectra are uploaded in .mzml format. </p>
Supplementary material 4 from: Mardones M, Carranza-Velázquez J, Mata-Hidalgo M, Amador-Fernández X, Urbina H (2023) Taxonomy and phylogeny of the genus Ganoderma (Polyporales, Basidiomycota) in Costa Rica. MycoKeys 100: 5-47. https://doi.org/10.3897/mycokeys.100.106810
Maximum Likelihood raw phylogenetic tree for ITS sequences of global Ganoderma
Supplementary material 1 from: Mardones M, Carranza-Velázquez J, Mata-Hidalgo M, Amador-Fernández X, Urbina H (2023) Taxonomy and phylogeny of the genus Ganoderma (Polyporales, Basidiomycota) in Costa Rica. MycoKeys 100: 5-47. https://doi.org/10.3897/mycokeys.100.106810
Ganoderma of Costa Rica_Linked Data Table Template for Primary Biodiversity Data
Supplementary material 1 from: Tehan RM, Dooley CB, Barge EG, McPhail KL, Spatafora JW (2023) New species and new combinations in the genus Paraisaria (Hypocreales, Ophiocordycipitaceae) from the U.S.A., supported by polyphasic analysis. MycoKeys 100: 69-94. https://doi.org/10.3897/mycokeys.100.110959
Endosclerotia LCMS feature list
Supplementary material 2 from: Mardones M, Carranza-Velázquez J, Mata-Hidalgo M, Amador-Fernández X, Urbina H (2023) Taxonomy and phylogeny of the genus Ganoderma (Polyporales, Basidiomycota) in Costa Rica. MycoKeys 100: 5-47. https://doi.org/10.3897/mycokeys.100.106810
ITS alignment for global Ganoderma
Supplementary material 4 from: Jin S, Parks KS, Janzen DH, Hallwachs W, Dyer LA, Whitfield JB (2023) The wing interference patterns (WIPs) of Parapanteles (Braconidae, Microgastrinae): demonstrating a powerful and accessible tool for species-level identification of small and clear winged insects. Journal of Hymenoptera Research 96: 967-982. https://doi.org/10.3897/jhr.96.111382
Data files and R code
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.