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3,878 results for “Molecular Data”
FIGURE 4 in Description of Alpheus buckupi spec. nov., a new amphi-Atlantic snapping shrimp (Caridea: Alpheidae), based on morphological and molecular data
FIGURE 4. Alpheus buckupi spec. nov.: A, male from Pacheco Beach, Caucaia, Ceará, Brazil (material not examined); B, paratype male from the confluence of the Pina and Capibaribe rivers, Recife, Pernambuco, Brazil (CCDB 3966), C, young male from Tassimirim Beach, Cairu, Bahia, Brazil (UESC 1521); D, female from Tassimirim Beach, Cairu, Bahia, Brazil (UESC 1521); E, ovigerous female from Moreré Beach, Cairu, Brazil (UESC 1522); F, male from Lagarto Beach, São Tomé and Príncipe (OUMNH). A–D, F: dorsal view; E: lateral view. Photographs: A, F: Arthur Anker; B–E: Alexandre O. Almeida.
FIGURE 3 in Description of Alpheus buckupi spec. nov., a new amphi-Atlantic snapping shrimp (Caridea: Alpheidae), based on morphological and molecular data
FIGURE 3. Alpheus buckupi spec. nov.: A–C, paratype, female (MZUSP 27549); D–K, holotype, male (MZUSP 27548): A; minor cheliped, lateral view; B, same, mesial view; C, same, dorsal view; D, second pereiopod, lateral view; E, third pereiopod, lateral view; F, same, dactylus and propodus, lateral view; G, fourth pereiopod, lateral view; H, same, ischium, lateral view; I, same, dactylus and propodus, lateral view; J, fifth pereiopod, lateral view; K, same, dactylus and propodus, lateral view. Scale bars: A–D, J = 2 mm; E–I, K = 1 mm.
FIGURE 1 in Description of Alpheus buckupi spec. nov., a new amphi-Atlantic snapping shrimp (Caridea: Alpheidae), based on morphological and molecular data
FIGURE 1. Alpheus buckupi spec. nov., holotype, male (MZUSP 27548): A, frontal region and cephalic appendages, dorsal view; B, detail of frontal region and proximal part of cephalic appendages, lateral view (frontal region slightly turned to the right); C, frontal region and cephalic appendages, lateral view; D, tooth on ventromesial carina of first segment of antennular peduncle, lateral view; E, scaphocerite, dorsal view (setae omitted); F, third maxilliped, lateral view; G, sixth abdominal segment, uropods and telson, lateral view; H, telson and uropods, dorsal view (setae omitted); I, detail of telson, dorsal view (setae omitted); J, right uropods, dorsal view (setae omitted). Scale bars: C, H = 2 mm; A, B, F, G, I, J = 1 mm; D, E = 0.5 mm.
FIGURE 2 in Description of Alpheus buckupi spec. nov., a new amphi-Atlantic snapping shrimp (Caridea: Alpheidae), based on morphological and molecular data
FIGURE 2. Alpheus buckupi spec. nov.: A–G, holotype, male (MZUSP 27548); H, paratype, female (MZUSP 27549): A, major cheliped, lateral view; B, same, mesial view; C, same, dorsal view; D, detail of major chela, lateral view; E, minor cheliped, lateral view; F, same, mesial view; G, same, dorsal view; H, detail of major chela, lateral view. Scale bars = 2 mm.
FIGURE 6 in Pachybrachis holerorum (Coleoptera: Chrysomelidae: Cryptocephalinae), a new species from the Apennines, Italy, identified by integration of morphological and molecular data
FIGURE 6. Pachybrachis karamani Weise, lectotype, median lobe of aedeagus, scale bar = 100 µm, magnification 140x. a: dorsal, b: ventral, c: lateral view.
FIGURE 2 in Pachybrachis holerorum (Coleoptera: Chrysomelidae: Cryptocephalinae), a new species from the Apennines, Italy, identified by integration of morphological and molecular data
FIGURE 2. Synthetic cladogram of the P. holerorum Montagna & Sassi diet obtained with Bayesian Inference on rbcL and the trnL(UAA) gene alignments (respectively a and b). Values of Bayesian Posterior Probabilities> 0.5 are reported above the branches.
FIGURE 5 in Pachybrachis holerorum (Coleoptera: Chrysomelidae: Cryptocephalinae), a new species from the Apennines, Italy, identified by integration of morphological and molecular data
FIGURE 5. Pachybrachis holerorum Montagna & Sassi, female rectal apparatus. a: ventral, b: dorsal, c: spermatheca.
FIGURE 4 in Pachybrachis holerorum (Coleoptera: Chrysomelidae: Cryptocephalinae), a new species from the Apennines, Italy, identified by integration of morphological and molecular data
FIGURE 4. Pachybrachis holerorum Montagna & Sassi, holotype, median lobe of aedeagus, scale bar = 100 µm, magnification 130x. a: dorsal, b: ventral, c: lateral view.
FIGURE 1. Cox1 in Pachybrachis holerorum (Coleoptera: Chrysomelidae: Cryptocephalinae), a new species from the Apennines, Italy, identified by integration of morphological and molecular data
FIGURE 1. Cox1 maximum likelihood ultrametric rooted tree obtained by GMYC analysis depicting the seven identified species of Pachybrachis (in red). The outgroup (Cryptocephalus zambanellus) and all branches with 0 length were removed in order to perform the analysis (see Materials and Methods). The vertical blue line depicts the estimated threshold between and within species, with the highest value of maximum likelihood; the vertical black line depicts the lowest value of the identified maximum likelihood confidence interval.
FIGURE 13. Phylogenetic tree inferred from a in Validation of the taxon Ixodes aragaoi Fonseca (Acari: Ixodidae) based on morphological and molecular data
FIGURE 13. Phylogenetic tree inferred from a partial sequence (435 characters, 113 parsimony informative) of the 16S rRNA mitochondrial gene of 12 tick species of the Ixodes ricinus complex, using I. nipponensis as outgroup. Numbers at nodes are the support values for the major branches (bootstrap) derived from 500 replicates for maximum parsimony. Number within brackets are GenBank accession numbers.
FIGURES 7–12. Ixodes aragaoi female. 7. Gnathosoma, dorsal view. 8. Gnathosoma, ventral view. 9 in Validation of the taxon Ixodes aragaoi Fonseca (Acari: Ixodidae) based on morphological and molecular data
FIGURES 7–12. Ixodes aragaoi female. 7. Gnathosoma, dorsal view. 8. Gnathosoma, ventral view. 9. Scutum with deep punctations (arrowed). 10. Coxae I–IV, internal spur on coxa I (arrowed). 11. Spiracular plate oval. 12. Tarsus I, capsule of Haller's organ (arrowed). Abbreviations: pa, porose area. Scale-bars: 7–8, 250 µm; 9–10, 500 µm; 11, 150µm; 12, 250 µm.
FIGURES 1–6. Ixodes aragaoi male. 1 in Validation of the taxon Ixodes aragaoi Fonseca (Acari: Ixodidae) based on morphological and molecular data
FIGURES 1–6. Ixodes aragaoi male. 1. Gnathosoma, dorsal view, basis capituli rectangular (arrowed). 2. Gnathosoma, ventral view, lateral and ventral lobes (arrowed). 3. Scutum, deep punctations (arrowed). 4. Idiosoma ventral view, coxae I–IV, internal spur on coxa I similar to the female. 5. Tarsus I. 6. Haller's organ, capsule (arrowed). Abbreviations: adp, adanal plate; ap, anal plate; mp, median plate. Scale-bars:1–2, 75µm; 3–4, 500 µm; 5, 50µm; 6, 150 µm.
FIGURE 4 in Morphological and molecular data support the distinctiveness of Pachycheles laevidactylus Ortmann, 1892 and Pachycheles chubutensis Boschi, 1963 (Anomura, Porcellanidae)
FIGURE 4. Phylogram for species of Pachycheles, based on Maximum Likelihood analysis (ML) of H3 nDNA gene sequences. ARG: Argentina, MP: Mar del Plata, RN: Rio Negro; BRA: Brazil, SC: Santa Catarina, RS: Rio Grande do Sul; CR: Costa Rica. Numbers below are 1000 bootstraps values. Values below 50% not shown.
FIGURE 1. Pachycheles laevidactylus Ortmann, 1892. A in Morphological and molecular data support the distinctiveness of Pachycheles laevidactylus Ortmann, 1892 and Pachycheles chubutensis Boschi, 1963 (Anomura, Porcellanidae)
FIGURE 1. Pachycheles laevidactylus Ortmann, 1892. A) General dorsal view (female, CCDB 1933); B) Minor cheliped (dorsal view); C) Telson with 5 plates (ventral view). Scale bar in A) = 1 cm.
FIGURE 2. Pachycheles chubutensis Boschi, 1963. A in Morphological and molecular data support the distinctiveness of Pachycheles laevidactylus Ortmann, 1892 and Pachycheles chubutensis Boschi, 1963 (Anomura, Porcellanidae)
FIGURE 2. Pachycheles chubutensis Boschi, 1963. A) General dorsal view (male, CCFurg 920); B) Minor cheliped, glabrous form (CCDB 2802, male, dorsal view); C) Telson with 7 plates (CCDB 2802, male, ventral view). Scale bar in A) = 1 cm.
FIGURE 3 in Morphological and molecular data support the distinctiveness of Pachycheles laevidactylus Ortmann, 1892 and Pachycheles chubutensis Boschi, 1963 (Anomura, Porcellanidae)
FIGURE 3. Phylogram for species of Pachycheles, based on Maximum Likelihood analysis (ML) of 16S mtDNA gene sequences. GenBank sequences are represented by (*). ARG: Argentina, MP: Mar del Plata, RN: Rio Negro; BRA: Brazil, SC: Santa Catarina; CR: Costa Rica; MEX: Mexico; VEN Venezuela; USA: United States of America. Numbers below are 1000 bootstraps values. Values below 50% not shown.
FIGURE 19 in Classification of Omalisidae based on molecular data and morphology, with description of Paradrilinae subfam. nov. (Coleoptera: Elateroidea)
FIGURE 19. Habitat of Paradrilus opacus Kiesenwetter, 1865—Arroyo del Molino, Santa María de Trassierra, Córdoba, Spain.
FIGURES 8–18. Paradrilus opacus Kiesenwetter, 1865 in Classification of Omalisidae based on molecular data and morphology, with description of Paradrilinae subfam. nov. (Coleoptera: Elateroidea)
FIGURES 8–18. Paradrilus opacus Kiesenwetter, 1865; 8—antenna; 9—mandible; 10—maxilla; 11—labium; 12—hypopharynx; 13—pronotum; 14—prosternum; 15—wing; 16—leg; 17—last abdominal segments; 18—aedeagus. Scale 0.05 mm (Fig. 11), 0.1 mm (Figs 9–10, 12, 17–18), 0.2 mm (Figs 13–14, 16), 0.5 mm (Figs 8, 15).
FIGURES 1–7. 1 in Classification of Omalisidae based on molecular data and morphology, with description of Paradrilinae subfam. nov. (Coleoptera: Elateroidea)
FIGURES 1–7. 1—The maximum likelihood (ML) Elateroidea phylogenetic tree of 557 taxa aligned by BlastAlign and inferred from RAxML; 2—Omalisidae phylogeny inferred from RAxML. The values at branches represent bootstrap values inferred from ML analyses of datasets aligned by BlastAlign and Mafft, respectively. 3—Euanoma marketae Kundrata & Bocak, 2007 (holotype); 4—Pseudeuanoma sp.; 5—Paradrilus opacus Kiesenwetter, 1865 (lectotype); 6—Phaeopterus unicolor Costa, 1857 (holotype); 7—Omalisus fontisbellaquei Geoffroy, 1762. Scale 2 mm (Figs 3–7).
FIGURE 2 in A second new species of Tyrrhenoleuctra discovered by means of molecular data: Tyrrhenoleuctra lusohispanica n. sp. (Plecoptera: Leuctridae)
FIGURE 2. General morphological characteristics of Tyrrhenoleuctra sp. Tip of the male abdomen in ventral view (a), lateral view (b) and dorsal view (c), tip of female abdomen in ventral view (d) (redrawn from Fochetti & Tierno de Figueroa 2008, 2009).
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.