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10,812 results for “novels”
IDNet: A Novel Dataset for Identity Document Analysis and Fraud Detection (part 7)
<p>This is part 7 of the IDNet dataset of our research paper "IDNet: A Novel Dataset for Identity Document Analysis and Fraud Detection". Here's a link to the paper: https://arxiv.org/pdf/2408.01690</p> <p>Citation:</p> <p>@article{guan2024idnet,<br> title={IDNet: A Novel Dataset for Identity Document Analysis and Fraud Detection},<br> author={Guan, Hong and Wang, Yancheng and Xie, Lulu and Nag, Soham and Goel, Rajeev and Swamy, Niranjan Erappa Narayana and Yang, Yingzhen and Xiao, Chaowei and Prisby, Jonathan and Maciejewski, Ross and Zou, Jia},<br> journal={arXiv preprint arXiv:2408.01690},<br> year={2024}<br>}</p>
IDNet: A Novel Dataset for Identity Document Analysis and Fraud Detection (part 6)
<p>This is part 6 of the IDNet dataset of our research paper "IDNet: A Novel Dataset for Identity Document Analysis and Fraud Detection". Here's a link to the paper: https://arxiv.org/pdf/2408.01690</p> <p>Citation:</p> <p>@article{guan2024idnet,<br> title={IDNet: A Novel Dataset for Identity Document Analysis and Fraud Detection},<br> author={Guan, Hong and Wang, Yancheng and Xie, Lulu and Nag, Soham and Goel, Rajeev and Swamy, Niranjan Erappa Narayana and Yang, Yingzhen and Xiao, Chaowei and Prisby, Jonathan and Maciejewski, Ross and Zou, Jia},<br> journal={arXiv preprint arXiv:2408.01690},<br> year={2024}<br>}</p>
IDNet: A Novel Dataset for Identity Document Analysis and Fraud Detection (part 8)
<p>This is part 8 of the IDNet dataset of our research paper "IDNet: A Novel Dataset for Identity Document Analysis and Fraud Detection". Here's a link to the paper: https://arxiv.org/pdf/2408.01690</p> <p>Citation:</p> <p>@article{guan2024idnet,<br> title={IDNet: A Novel Dataset for Identity Document Analysis and Fraud Detection},<br> author={Guan, Hong and Wang, Yancheng and Xie, Lulu and Nag, Soham and Goel, Rajeev and Swamy, Niranjan Erappa Narayana and Yang, Yingzhen and Xiao, Chaowei and Prisby, Jonathan and Maciejewski, Ross and Zou, Jia},<br> journal={arXiv preprint arXiv:2408.01690},<br> year={2024}<br>}</p>
Generative AI for designing and validating easily synthesizable and structurally novel antibiotics: Data and Models
<p>This repository contains data and models used in the following paper.</p> <p>Swanson, K., Liu, G., Catacutan, D., Zou, J. & Stokes, J. <a href="https://www.nature.com/articles/s42256-024-00809-7">Generative AI for designing and validating easily synthesizable and structurally novel antibiotics</a>. <em>Nature Machine Intelligence, </em>2024.</p> <p>The data and models are meant to be used with the <a href="https://github.com/swansonk14/SyntheMol">SyntheMol</a> code. More details about how to use the data and models with the code are available <a href="https://github.com/swansonk14/SyntheMol/tree/main/docs">here</a>.</p> <p>The Data.zip file has the following structure. Note that the numbers for the Data subdirectories correspond to the supplementary data numbers in the paper (e.g., 1_training_data corresponds to Supplementary Data 1).</p> <p>Data</p> <p> 1_training_data: The <em>Acinetobacter baumannii</em> inhibition data used to train antibiotic property prediction models.</p> <p> 2_chembl: Known antibiotic and antibacterial molecules from <a href="https://www.ebi.ac.uk/chembl/">ChEMBL</a>, which are used to compute the novelty of generated antibiotic candidates.</p> <p> 4_real_space: Data files and statistics for the <a href="https://enamine.net/compound-collections/real-compounds/real-space-navigator">Enamine REAL Space</a>. The molecular building blocks file is version 2021 q3-4 while all other REAL Space details are computed from the full enumerated REAL space version 2022 q1-2 (downloaded on August 30, 2022).</p> <p> 5_generations_clogp: Compounds generated by SyntheMol using Chemprop models trained to predict cLogP.</p> <p> 6_generations_chemprop: Compounds generated by SyntheMol using Chemprop models trained to predict <em>A. baumannii</em> inhibition.</p> <p> 7_generations_chemprop_rdkit: Compounds generated by SyntheMol using Chemprop-RDKit models trained to predict <em>A. baumannii</em> inhibition.</p> <p> 8_generations_random_forest: Compounds generated by SyntheMol using random forest models trained to predict <em>A. baumannii</em> inhibition.</p> <p> 9_synthesized: Information on the 58 SyntheMol-generated compounds that were successfully synthesized by Enamine.</p> <p>The Models.zip file contains one folder for each model used in the paper. Note that each model is technically an ensemble of ten individual models, so each directory contains ten model files.</p>
Efficacy and in vitro pharmacological assessment of novel N-hydroxypyridinediones as hepatitis B virus ribonuclease H inhibitors
<p>The data here is summarized in Efficacy and in vitro pharmacological assessment of novel N-hydroxypyridinediones as hepatitis B virus ribonuclease H inhibitors by Woodson, et al. </p>
BioValue´s Sensory Evaluation Workshop of Novel Processed Foods
<p>The Workshop for the sensory evaluation of novel processed foods was organised with great success in May 2023 at CIHEAM MAICh. Nine newly developed novel processed foods containing at least one of the underutilized selected crops, i.e., Lens culinaris, Lathyrus spp., Fagopyron spp., Tomato ideotypes, Eggplant landraces, Cucumis melo var. flexuosus and Sonchus oleraceus, were prepared in the experimental kitchen of MAICh. A group of about 30 tasters consisting of professionals, i.e., nutritionists, food chemists, doctors, chefs, as well as consumers from a range of societal groups participated in the sensory evaluation process that included blind-tasting and filling in a specific questionnaire prepared for the evaluation of the appearance, aroma, taste, and texture of the new products. For the selection of the participants, gender equality and age variation were taken into consideration. In accordance with the feedback obtained from this evaluation, the improvement of the recipe design will be discussed. The BioValue team of CIHEAM MAICh would like to thank all the participants for their time and willingness to take part in this workshop.</p>
Paradise fish (Macropodus opercularis) as novel translational model for emotional and cognitive function - RAW DATA
<p>The data of the study under the title "Paradise fish (Macropodus opercularis) as novel translational model for emotional and cognitive function". The structure of the data follows the structure of the results section of the paper. Data sheets are labeled according to figure numbers of the papers.</p>
Supplementary videos of "Description of a novel extremophile green algae, Chlamydomonas pacifica, and its potential as a biotechnology host" Molino et al
<p><strong>Supplementary Video 1: </strong>Motility tracking of <em>C. pacifica</em> - (Raw_402_Video_1.mp4)</p> <p> </p> <p><strong>Supplementary Video 2: </strong>Motility tracking of <em>C. pacifica</em> - (Raw_402_Video_2.mp4)</p> <p> </p> <p><strong>Supplementary Video 3:</strong> Motility tracking of <em>C. pacifica</em> - (Raw_402_Video_3.mp4)</p> <p> </p> <p><strong>Supplementary Video 4:</strong> Motility tracking of <em>C. pacifica</em> - (TrackMate capture of Video_1_402.avi)</p> <p> </p> <p><strong>Supplementary Video 5: </strong>Motility tracking of <em>C. pacifica</em> - (TrackMate capture of Video_2_402.avi)</p> <p> </p> <p><strong>Supplementary Video 6:</strong> Motility tracking of <em>C. pacifica</em> - (TrackMate capture of Video_3_402.avi)</p> <p> </p> <p><strong>Supplementary Video 7:</strong> Mating video 1 - (Starting to aggregate 402 403.avi)</p> <p> </p> <p><strong>Supplementary Video 8:</strong> Mating video 2 - (Fusing_cell_wall_motility.avi)</p> <p> </p> <p> </p>
Genome-wide association study identifies 18 novel loci associated with left atrial volume and function
<p><strong>README</strong></p> <p>Publication: Genome-wide association study identifies 18 novel loci associated with left atrial volume and function</p> <p>Ahlberg and Andreasen et al.</p> <p>Published: 29 July 2021, doi: <a href="https://doi.org/10.1093/eurheartj/ehab466">https://doi.org/10.1093/eurheartj/ehab466</a></p> <p>summary statistics for LAmax: rntrn_ilamax.bgen.stats.betastd.tsv.gz <br> summary statistics for LAmin: rntrn_ilamin.bgen.stats.betastd.tsv.gz <br> summary statistics for LAAEF: rntrn_laaef.bgen.stats.betastd.tsv.gz <br> summary statistics for LAPEF: rntrn_lapef.bgen.stats.betastd.tsv.gz <br> summary statistics for LATEF: rntrn_latef.bgen.stats.betastd.tsv.gz </p> <p> </p> <p>Description:</p> <p>SNP: rs number or ID string<br> CHR: chromosome<br> BP: physical (base pair) position<br> GENPOS: genetic position either from bim file or interpolated from genetic map<br> ALLELE1: first allele in bim file (usually the minor allele), used as the effect allele<br> ALLELE0: second allele in bim file, used as the reference allele<br> A1FREQ: frequency of first allele<br> F_MISS: fraction of individuals with missing genotype at this SNP<br> BETA: effect size from BOLT-LMM approximation to infinitesimal mixed model<br> SE: standard error of effect size<br> P_BOLT_LMM_INF: infinitesimal mixed model association test p-value<br> P_BOLT_LMM: non-infinitesimal mixed model association test p-value<br> N: sample size <br> bstd: standardized effect size from BOLT-LMM <br> sestd: standardized standard error of effect size</p>
Novel insights into habitat suitability for Amazonian freshwater mussels linked with hydraulic and landscape drivers
<p><span>Novel insights into habitat suitability for two Unionida freshwater mussels, <i>Castalia ambigua</i> Lamarck, 1819 (Hyriidae) and <i>Anodontites elongatus </i><span>(Swainson, 1823) (Mycetopodidae)</span><i>,</i> is presented on the basis of hydraulic variables linked with the riverbed in six 500 m reaches in an eastern Amazonian river basin. Within the reaches, there was strong habitat heterogeneity in hydrodynamics and substrate composition. In addition, we investigated stressors based on landscape modification that are associated with declines in mussel density. We measured hydraulic variables for each 500 m reach, and landscape stressors at two spatial scales (subcatchment and riparian buffer forest). W<span>e used </span><span>the</span> <span>R</span><span>andom </span><span>F</span><span>orest algorithm,</span> a tree-based model, to predict the hydraulic variables linked with habitat suitability for mussels, and to predict which landscape stressors were most associated with mussel density declines. Both mussel species were linked with low substrate heterogeneity and greater riverbed stability (low Froude and Reynolds numbers), especially at high flow (low stream power). Different sediment grain size preferences were observed between mussel species: <i>Castalia ambigua</i> was associated with medium sand, and <i>Anodontites elongatus</i> with medium and fine sand. Declines in mussel density were associated with modifications linked to urbanization at small scales (riparian buffer forest), especially with percent of and distance from rural settlements, distance to the nearest street, and road density. In summary, the high<span> variance </span><span>explained </span><span>in both hydraulic and landscape models</span><span> indicated </span><span>high predictive power, </span><span>suggesting that our findings</span> <span>may be extrapolated </span><span>and used as a baseline to test </span><span><span>hypotheses of habitat suitability </span></span><span><span>in other Amazonian rivers</span></span><span><span> for </span></span><i><span>Castalia ambigua</span></i><span><span> and </span></span><i><span>Anodontites elongatus</span></i><span><span>, and also </span></span><span><span>for</span></span><span><span> other </span></span><span><span>freshwater </span></span><span><span>mussel species</span></span><span>. </span>Our results highlight the urgent need for aquatic habitat conservation to maintain sheltered habitats during high flow as well as mitigate the effects of landscape modifications at the riparian buffer scale, both of which are important for maintaining dense mussel populations and habitat quality.</span></p>
The first Silurian trilobite with three-dimensionally preserved soft parts reveals novel appendage morphology
<p>The first Silurian trilobite known with soft parts preserved, a <i>Dalmanites</i> species, is described from the Herefordshire Lagerstätte. Biramous appendages and much of the alimentary system are evident. High-fidelity three-dimensional preservation reveals a novel, double arrangement of the exopod filaments, interconnected by a presumed membranous sheet. This morphology explains a misinterpretation of the exopod as supporting spiral structures, originally reported nearly 150 years ago. The new exopod morphology is considered primarily respiratory in function and comparison with other trilobite limbs suggests that it may be unique to Phacopida.</p>
Novel canine high-quality metagenome-assembled genomes by long-read metagenomics together with Hi-C proximity ligation
<p>We characterized a canine fecal sample of a healthy dog by combining a long-read metagenomics assembly (Nanopore sequencing) with Hi-C cross-linking data, and further correction of the frameshift errors. We retrieved and characterized 27 HQ MAGs and seven MQ MAGs considering MIMAG criteria.</p> <p>Find in this repository the final Hi-C genomics bins (CanMAG_XX-HiCbin.fa), including both the genome and the extra-chromosomal elements within the bin. </p> <p> </p>
Novel approach to delivering pro-environmental messages significantly shifts norms and motivation, but children are not more effective spokespeople than adults
<p>Three studies provided initial laboratory tests of the effectiveness of a novel form of community-based environmental messaging intended to be deployed on public digital signs. In all studies, adult participants watched a slideshow of "Community Voices," a display that combines community images and quotes to celebrate and empower pro-environmental and pro-community thought and action. In addition to assessing the general efficacy of the approach, a central goal was to assess the impact of alternative messengers by comparing identical text associated with either adult or child messengers (Studies 1, 2, and 3). We also assessed the impact of alternative framing of the message itself by comparing: injunctive vs non-injunctive wording (Study 1), political vs non-political content (Study 1), and future vs. present-oriented framing (Study 2). Studies 1 and 2 were conducted on a national sample. In addition, to assess the impact of local vs. non-local messengers, Study 3 compared the response of a non-local sample to a local population in which subjects had personal connections with the people and places featured in the message content. Exposure to Community Voices messages resulted in significant increases in social norm perception, concern about environmental issues, commitment to action, and optimism, suggesting that this approach to messaging is potentially valuable for stimulating cultural change. However, messages attributed to child messengers were generally not more effective, and in some cases were less effective than the same message attributed to adults. We also found no significant difference in the impact of the alternative message frames studied.</p>
Figure 4 in Novel Australian Polyzoinae (Styelidae, Tunicata)
Figure 4. Botryllocarpa elongata (SAM E3232). (A) Zooid; (B) gut loop. Scale bars: 0.1 mm.
Dataset for "A novel method to identify sub-seasonal clustering episodes of extreme precipitation events and their contributions to large accumulation periods"
<p>Dataset for "A novel method to identify sub-seasonal clustering episodes of extreme precipitation events and their contributions to large accumulation periods".</p> <p>Added file "Obs_metrics_all.RData" containing p-value for significance test of the clustering metric S_cl.</p> <p>Accepted version (August 2021).</p>
Novel Datasets for Evaluating Song Popularity Prediction Tasks
<p>We present two novel datasets for hit song prediction (HSP): HSP-S and HSP-L. They are substantially larger than currently available dataset with respect to the number of features contained.</p> <p>Both datasets provide high- and low-level audio features stemming from <a href="https://acousticbrainz.org/data">AcousticBrainz</a> and short representative MP3 samples. Further, we include listener- and play-counts gathered from <a href="https://www.last.fm">last.fm</a> for both datasets. The larger dataset, HSP-L, contains 73,482 songs with audio features, listener- and play-counts, making it substantially larger than previous datasets. In addition, we provide the release year information for 65,575 songs as provided by the <a href="https://millionsongdataset.com">Million Song Dataset</a>.<br> The smaller dataset, HSP-S, contains 7,736 songs, listener- and play-counts as well as <a href="https://www.officialcharts.com/charts/billboard-hot-100-chart/">Billboard Hot 100</a> data for 50% of the songs, and release year information is available for 7,449 songs.</p>
Novel Insights into the Bioactive Metabolites of Macrocybe gigantea (Massee) Pegler & Lodge, a Wild Edible Macrofungi Using Gas Chromatography Mass Spectrometry (GC-MS) Combined with Chemoinformatics Approaches
<p><em>Macrocybe gigantea </em>(MG) is an edible mushroom and has multiple pharmacological activities such as antibacterial, antioxidant, and antitumor activities. However, only a few reports were available on the bioactive compounds and bioactivity of this mushroom. In this concern, the present study was aimed to explore the unique chemical diversity from the fruiting body of MG<em>. </em>The species identification was done accurately with morphological and molecular methods followed by mycochemical extraction in different solvent systems. The ethanolic extract of the fruiting body gave maximum yield and its Gas Chromatography-Mass Spectrometry (GC-MS) analysis was performed along with antibacterial activity and cell viability by MTT assay. The GC-MS analysis revealed 50 metabolites and further chemoinformatics analysis of these metabolites revealed their possible biological activities. In addition, the mushrooms' physico-chemical and mineral element analysis revealed the quality and authenticity of the species. Altogether, the current investigation gives a comprehensive overview of the bioactive metabolites of MG.</p>
Japanese Visual Media Graph - Visual Novel Database Ontology
<p>This group of files represents the RDF ontology used in the Japanese Visual Media Graph for the Visual Novel Database. Included in the upload are an explanatory PDF, the ontology in the Turtle serialization, and an HTML visualization of the ontology.</p>
A Case of Psychogenic Myoclonus Responding to a Novel Transcranial Magnetic Stimulation Approach: Rationale, Feasibility, and Possible Neurophysiological Basis
<p>Repetitive transcranial magnetic stimulation (rTMS) can relieve motor symptoms related to psychogenic movement disorders (PMDs), but the subtending neurophysiological basis is unclear. We report on a 50-year-old woman with a diagnosis of psychogenic myoclonus in the right lower limb, who was treated with a daily session (in the late morning/early afternoon) of 1 Hz rTMS over the left premotor cortex (PMC), five times a week for 6 weeks. Clinical data and EEG at rest were collected before and immediately and 2-month after the rTMS protocol completion. The patient reported a significant reduction of involuntary movement frequency and intensity and the related disability burden up to the follow-up. In parallel, any abnormality in terms of source current density within and connectivity between the frontal and parietal areas was reset. The short follow–up period, the lack of extensive neurophysiological measures, and the lack of control treatment represent the main limitation of the study. However, low-frequency rTMS over PMC seems a safe and promising approach for the management of psychogenic myoclonus owing to the combination of cortical neuromodulation and non-specific mechanisms suggesting cognitive-behavioral effects.</p>
A novel use of virtual reality in the treatment of cognitive and motor deficit in spinal cord injury
<p>Aim of this study is to evaluate the cognitive and motor outcomes after a combined rehabilitative training using a standard cognitive approach and virtual reality (VR), in a patient with spinal cord injury (SCI). A 60-year-old right-handed man, affected by incomplete cervical SCI, came to our observation for a moderate tetraparesis, mainly involving the left side, after about 6-months from the acute event. The neurological examination showed imbalance with upper limb incoordination, besides the paresis mainly involving the left side. At a neuropsychological evaluation, he presented important impairment in cognitive and behavioural status, with temporal and spatial disorientation, a reduction of attention and memory process, deficit of executive function and a severe depression of mood, which was not detected during the previous recovery. Motor and cognitive deficits in SCI. The patient was 1st submitted to standard cognitive training and traditional physiotherapy, and then to a combined therapeutic approach, in which virtual reality training was provided by means of the virtual reality rehabilitation system (VRRS, Khymeia, Italy). After the combined therapeutic approach with the VRRS training, we observed a significant improvement in different cognitive domains, a notable reduction of anxiety and depressive symptoms, as well as motor performance, and balance improvement. Virtual reality can be considered a promising tool for the rehabilitation of different neurological disorders, including patients with both motor and cognitive deficits following SCI.</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.