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zenodo40/100

Figure 2 in First report of morphological and molecular characterization of Moroccan populations of Globodera pallida

Figure 2: Photomicrographs of morphological characterization of cyst, egg, and second-stage juvenile. A, B: Cyst of GlOBOdeRa pallida, C: Vulva (v), anus (a), and cuticular ridges (r) of cyst, D, E: Stylet knob shape of J2, F: Juvenile tail.

opencc-by-4.0Dec 2020View details →
zenodo40/100

Figure 3 in First report of morphological and molecular characterization of Moroccan populations of Globodera pallida

Figure 3: Amplified PCR products from GlOBOdeRa Spp. digested by three enzymes AluI, MboI, and RsaI. A: Amplified PCR products, B: AluI, C: RsaI, D: MboI, MW: molecular weight markers (1 kb), NC: negative control, PC: undigested DNA, S1-S2: Eastern region samples, S3-S4: Western region samples (Gharb), S5-S6: Doukkala region samples.

opencc-by-4.0Dec 2020View details →
zenodo40/100

Figure 1 in Soybean Cyst Nematode Population Development and Its Effect on Pennycress in a Greenhouse Study

Figure 1: Influence of inoculation level and crop treatment on final SCN egg population density in the greenhouse evaluation experiment. Soybean-S was soybean genotype 'Sturdy'; PC-MN103 was pennycress genotype 'MN103'; PC-MN106 was pennycress genotype 'MN106'; and PC-MN108 was pennycress genotype 'MN108'. The genotypes were sourced from the University of Minnesota pennycress and soybean breeding programs. Error bars denote standard error. Within an inoculation level, bars with the same lowercase letter did not differ in SCN population density using Tukey–Kramer least-square means (P <0.05). SCN, soybean cyst nematode.

opencc-by-4.0Apr 2022View details →
zenodo40/100

Figure 7 in Population abundance and growth parameters of an exotic bivalve species, Anadara kagoshimensis, in the Southwestern Black Sea

Figure 7. Seasonal (red line) and non-seasonal (blue line) von Bertalanffy growth curves of A. kagoshimensis

opencc-by-4.0Jan 2023View details →
zenodo40/100

Figure 10 in Population abundance and growth parameters of an exotic bivalve species, Anadara kagoshimensis, in the Southwestern Black Sea

Figure 10. UPGMA phylogenetic tree based on COI gene sequences of two Anadara species and Arca avellana retrieved from Genbank and also three new sequences obtained from this study (OK091154-OK091156). Numbers by the nodes show bootstrap support probabilities.

opencc-by-4.0Jan 2023View details →
zenodo40/100

Figure 9 in Population abundance and growth parameters of an exotic bivalve species, Anadara kagoshimensis, in the Southwestern Black Sea

Figure 9. Nonseasonal VBGP obtain from LFDA (shell length 2 mm size classes frequency distributions; February, May, July, December 2011, February, July, December 2012)

opencc-by-4.0Jan 2023View details →
zenodo40/100

Figure 8 in Population abundance and growth parameters of an exotic bivalve species, Anadara kagoshimensis, in the Southwestern Black Sea

Figure 8. Seasonal VBGP obtained from LFDA (shell length 2 mm size classes frequency distributions; February, May, July, December 2011, February, July, December 2012).

opencc-by-4.0Jan 2023View details →
dryad40/100

Impact of infectious diseases on wild bovidae populations in Thailand: Insights from population modelling and disease dynamics

<p>The wildlife and livestock interface is vital for wildlife conservation and habitat management. Infectious diseases maintained by domestic species may impact threatened species such as Asian bovids, as they share natural resources and habitats. To predict the population impact of infectious diseases with different traits, we used stochastic mathematical models to simulate the population dynamics over 100 years for 100 times a model gaur (<em>Bos gaurus</em>) population with and without disease. We simulated repeated introductions from a reservoir, such as domestic cattle. We selected six bovine infectious diseases; anthrax, bovine tuberculosis, hemorrhagic septicaemia, lumpy skin disease, foot and mouth disease and brucellosis, all of which have caused outbreaks in wildlife populations. From a starting population of 300, the disease-free population increased by an average of 228% over 100 years. Brucellosis with frequency-dependent transmission showed the highest average population declines (-97%), with population extinction occurring 16% of the time. Foot and mouth disease with frequency-dependent transmission showed the lowest impact, with an average population increase of 200%. Overall, acute infections with very high or low fatality had the lowest impact, whereas chronic infections produced the greatest population decline. These results may help disease management and surveillance strategies support wildlife conservation.</p>

opencc-zeroJun 2024View details →
zenodo40/100

Supplementary information: Subsistence and Population development from the Middle Neolithic B (2800-2350 BCE) to the Late Neolithic (2350-1700 BCE) in Southern Scandinavia

<p>This is the supplementary information of the paper &ldquo;Subsistence and Population development from the Middle Neolithic B (2800-2350 BCE) to the Late Neolithic (2350-1700 BCE) in Southern Scandinavia&rdquo; (DOI: tba). Please consult the publication for in depth description of the data, its context and for the method applied on the data, as well as references to primary sources. Requirements to be installed to run the scripts: Python 3 (https://www.python.org/) with the packages numpy (https://numpy.org/), pandas (https://pandas.pydata.org/), matplotlib (https://matplotlib.org/), seaborn (https://seaborn.pydata.org/) and scipy (https://scipy.org/); all included in Ancaonda (Python-Distribution, https://www.anaconda.com/). R (https://cran.r-project.org/) with the packages here (https://cran.r-project.org/web/packages/here/index.html) and rcarbon (https://cran.r-project.org/web/packages/rcarbon/index.html), tidyverse, vegan, ggplot2, reshape2, RcppRoll.&nbsp;</p>

opencc-by-4.0Jun 2024View details →
zenodo40/100

Figures 28-40 in Oogenesis in Phragmatopoma (Polychaeta: Sabellariidae): Evidence for morphological distinction among geographically remote populations

Figures 28-40. Ultrastructure in Phragmatopoma caudata of the SW Atlantic. Growth Phase. Figure 28 Oocyte during late vitellogenesis filled with yolk granules (Y) and lipid droplets (Li). Note the cytoplasmic patches where the annulate lamellae (Al) are located and the welldeveloped egg envelope (Eg) (810x). Figure 29 Ripe oocytes occupy the entire coelomic cavity toward the body wall (810x). MC = muscle; Ep = epidermis. Figure 30 General view of the annulate lamellae (Al) between yolk granules and lipid droplets (560X). Figures 31-33 The annulate lamellae are composed by fenestrated endomembranes (arrows) parallel to each other arranged (Figure 31, 2,900X. Figure 32, 10,500X. Figure 33, 3,100X). Figure 34 Mature yolk granules with an elliptical shape (Y) showing a medullar crystalline substructure (white arrow) and non-crystalline cortex with electron-lucent spheres (black arrow) (13500X). Figure 35 Crystallised medullar in a parallel arrangement (white arrow) and a cortical lucid sphere (black arrow) (43,000X). Figure 36 Yolk granules (Y) and lipid droplets (Li) in the cytoplasm, with the presence of glycogen granules (arrow) close to the droplets (13,500X). M = mitochondria. Figure 37 Details of yolk granules delimited by the membrane (arrow) next to a lipid droplet (Li) and glycogen (Gly) (61000X). Figure 38 Cortical cytoplasm filled with yolk granules (Y), lipid droplets (Li) and cortical granules (CG) below the plasma membrane. Notice the thick egg envelope (Eg) (2,050X). Figure 39 The perivitelline space (1) is narrow and the egg envelope (Eg) is composed of two layers (2 and 3) with different electron-densities. The winding microvilli (Mv) are completely immersed in the egg envelope. Only the apical surface of the microvilli is in contact with the coelomic cavity (arrow) (5,400X). CG = cortical granules. Figure 40 Microvilli apex showing the expansion bears extensive filamentous adornment with an electron-dense centre (31,000X).

opencc-by-4.0Dec 2014View details →
zenodo40/100

Figures 22-27 in Oogenesis in Phragmatopoma (Polychaeta: Sabellariidae): Evidence for morphological distinction among geographically remote populations

Figures 22-27. Ultrastructure in Phragmatopoma caudata of the SW Atlantic. Grow Phase. Figure 22 Oocyte during early vitellogenesis (Ev) with attributes of several yolk granules (Y) and lipid droplets (Li) in the cytoplasm, adjacent to an oocyte in late vitellogenesis (Lv) which vitelline envelope (Eg) thick (1,450X). N = nucleus, arrow = clumps of heterochromatin. Figure 23 Nucleus showing the heterochromatin clumps (large white arrow) and many complex pores in the nuclear envelope (small white arrows). The perinuclear cytoplasm aspect of granular material accumulations, juxtaposed with the nuclear envelope (black arrow) and next to mitochondria (M) (2,050X). Figure 24 Small and rounded yolk granules (Y) with different electron-densities and lucid spheres are observed inside. Besides Vesicles containing some electron-dense material (white arrow) also have lucid spheres (black arrow) and resemble nascent yolk granules (8,200X). Figure 25 Yolk granules (Y) of oocytes at the beginning of vitellogenesis showing varied electron-densities (black arrow) and electron-lucent spheres (large white arrow). Glycogen is also noticed (small white arrow) (21,500X). Figure 26 Cortical cytoplasm showing Golgi complexes (GC) close to the cortical granules (CG), which are filled with a fibrous material (black arrow). Note the large amount of glycogen (Gly) in the cytoplasm (1,150X). White arrow = glycogen. Figure 27 Microvilli (Mv) are larger and the egg envelope (Eg) thicker (2), relative to the previous stage. The perivitelline space (1) appears thinner (1500X).

opencc-by-4.0Dec 2014View details →
zenodo40/100

Figures 15-21 in Oogenesis in Phragmatopoma (Polychaeta: Sabellariidae): Evidence for morphological distinction among geographically remote populations

Figures 15-21. Ultrastructure in Phragmatopoma caudata of the SW Atlantic. Grow Phase. Figures 15 and 16 Previtellogenic oocyte with a large nucleus (N) and nucleolus (Nu), as well as small rough heterochromatin clumps (small arrow). The cytoplasm is filled with rough, lamellar endoplasmic reticulum (RER) and noticeable mitochondria (M) in the perinuclear cytoplasm. The elongated portions of these cells create adhesion with adjacent oocyte (large arrow) (Figure 15, 2,050X. Figure 16, 4,200X). Oc = oocyte. Figure 17 Cytoplasm showing glycogen α (Gly) greater than the ribosomes (white arrows) attached to the reticulum (black arrow) (13,500X). M = mitochondria. Figures 18 and 19 Cortical cytoplasm of the rounded surface, showing Golgi complexes (GC) close to the cortical granules (CG), positioned beneath the microvilli (Mv) with the expansion bearing extensive filamentous adornment above the vitelline envelope (Eg) (Figure 18, 10,500x. Figure 19, 5,400X). Figures 20 and 21 Plasma membrane on a rounded surface showing endocytic depressions (black arrow) and coated vesicles (Cv). The vitelline envelope is composed by means of medium-apical extracellular matrix (2) in relation to microvilli (Mv). The basal region is electron-lucent and forming the beginnings of the perivitelline space (1) (Figure 20. 13,500X. Figure 21, 28,000X). GC = Golgi complexes, Eg = vitelline envelope.

opencc-by-4.0Dec 2014View details →
zenodo40/100

Figures 10–14 in Oogenesis in Phragmatopoma (Polychaeta: Sabellariidae): Evidence for morphological distinction among geographically remote populations

Figures 10–14. Ultrastructure in Phragmatopoma caudata of the SW Atlantic. Proliferative Phase. Figures 10 and 11 Oogonia (Oo) and oocytes (Oc) connected via cellular prolongations (white arrow) to the endothelium of the intersegmental blood vessel (Bv). Note that the contact of ovary basal lamina is quite electron dense (black arrow). Desmosomes (D) form the oocyte-oocyte junction (Figure 10, 1,150X; Figure 11, 2,050X). M = mitochondria; Ch = chromosome. Figure 12 Oogonia with mitotic chromosomes (Ch) and oocytes in prophase with finely granular chromatin and chromosomes united by synaptonemal complexes (arrows) (2,400X). Figure 13 Synaptonemal complex (33,600X). N = nucleus. Figure 14 Narrow cytoplasm in oogonia (Oo) androunded nucleus. Oocyte (Oc) with wide cytoplasm and adhesion via desmosomes (D) (2,050X).

opencc-by-4.0Dec 2014View details →
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Figures 1–9 in Oogenesis in Phragmatopoma (Polychaeta: Sabellariidae): Evidence for morphological distinction among geographically remote populations

Figures 1–9. Histology and Histochemistry in Phragmatopoma caudata of the SW Atlantic. Figures 1 and 2 Oogonia (Oo) and previtellogenic oocytes (Pv) of early vitellogenesis (Ev) associated with the intersegmental blood vessels (BV) for cytoplasmic prolongations (black star). Oocytes in advanced and late vitellogenesis are released into the coelomic cavity (white star). Oocytes in vitellogenesis have intensely acidophilic granules, and the ripe oocytes are less acidophilus (black arrows). Figure 2 depicts oocytes in late vitellogenesis occupying the entire coelom with a basophils vitelline envelope (white arrow). N = nucleus; H&amp;E staining. Scales = 20 μm. Figures 3 and 4 Techniques used to visualize basic and total proteins, respectively. The previtellogenic and vitellogenesis (Ev) oocytes (Pv) have intense granules (large black arrow), and the ripe in late vitellogenesis (Lv) are less reactive (white arrow). The vitelline envelope is reactive to protein (small arrow). Scales = 20 μm. Figure 5 Technique for visualizing neutral polysaccharides with positive staining in both the previtellogenic oocyte cytoplasm and the vitellogenic oocyte granules. The reactivity disappears in the vitellogenic granules of ripe oocytes, but surrounding these is a noticeable positive staining (large black arrow). Star = oogonia with little reactivity to neutral polysaccharides. The egg envelope is reactive to PAS (small arrow). Scale = 20 μm. Figures 6 and 7 Absence of acid polysaccharides (pH 1.0 and 2.5), respectively, in oogonia and oocytes in P. caudata. Scales = 20 μm. Figures 8 and 9 Lipids stained by Sudan Black B. The oogonia are uniformly positive (small white arrow), while the oocytes during previtellogenesis and vitellogenesis have droplets in the cytoplasm (large black arrow). The yolk granules are reactive during vitellogenesis, while the staining is less intensive (large white arrows) in the mature oocytes. The vitelline envelopes have lipids (small black arrow). Scales = 20 μm.

opencc-by-4.0Dec 2014View details →
zenodo40/100

Figure 2 in A review of the occurrence and ecology of dense populations of Ditrupa arietina (Polychaeta: Serpulidae)

Figure 2. Photo of East Shetland Basin survey station 28 sample with numerous Ditrupa tubes; also visible are the solitary coral Caryophyllia smithii (red arrow) and the foraminiferan Astrorhiza arenaria (yellow arrow).

opencc-by-4.0Dec 2014View details →
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Figure 1 in A review of the occurrence and ecology of dense populations of Ditrupa arietina (Polychaeta: Serpulidae)

Figure 1. Records of high densities of Ditrupa from the North-east Atlantic and Mediterranean Sea. 1, Stephen (1923). 2, Glémarec (1969). 3, Hartley and Dicks (1977). 4, Dyer et al. (1982). 5, Gambi and Giangrande (1986). 6, Grémare et al. (1998). 7, Cosentino and Giacobbe (2006). 8, Hartley Anderson Ltd (2008). 9, Labrune et al. (2007a). 10, Gardline (2009). 11, Morton and Salvador (2009). 12, Wilson et al. (1983).

opencc-by-4.0Dec 2014View details →
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Figure 9 in Population biology of the ghost shrimps, Trypaea australiensis and Biffarius arenosus (Decapoda: Thalassinidea), in Western Port, Victoria.

Figure 9. Relationships between embryo volume (mm3) and body size (CL3 = carapace length3) for females of Trypaea australiensis and Biffarius arenosus. Embryos were from females collected from March 2006 to May 2007 at Warneet and Crib Point, Western Port.

opencc-by-4.0Dec 2009View details →
zenodo40/100

Figure 8 in Population biology of the ghost shrimps, Trypaea australiensis and Biffarius arenosus (Decapoda: Thalassinidea), in Western Port, Victoria.

Figure 8. Carapace length (CL) size frequency distributions for Biffarius arenosus collected at Crib Point, Western Port in 2006-2007. Non-ovigerous females are shown by black bars, ovigerous females by grey bars and males by open bars (n = number of shrimp collected). Individuals are grouped into size classes by rounding to the closest mm from two decimal places. Arrows show mean CL for cohorts as calculated in FISAT II.

opencc-by-4.0Dec 2009View details →
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Figure 7 in Population biology of the ghost shrimps, Trypaea australiensis and Biffarius arenosus (Decapoda: Thalassinidea), in Western Port, Victoria.

Figure 7. Carapace length (CL) size frequency distributions for Biffarius arenosus collected at Warneet, Western Port in 2006-2007. Non-ovigerous females are shown by black bars, ovigerous females by grey bars and males by open bars (n = number of shrimp collected). Individuals are grouped into size classes by rounding to the closest mm from two decimal places. Arrows indicate mean CL of cohorts calculated in FISAT II.

opencc-by-4.0Dec 2009View details →
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Figure 5 in Population biology of the ghost shrimps, Trypaea australiensis and Biffarius arenosus (Decapoda: Thalassinidea), in Western Port, Victoria.

Figure 5. Proportion of ovigerous females for April 2004 to March 2005 (a. Trypaea australiensis, b Biffarius arenosus) and March 2006 to May 2007 (c. T. australiensis, d. B. arenosus) at Warneet, Western Point. Proportion of ovigerous females for April 2006, October 2006 - February 2007 and April 2007 (e. T. australiensis, f. B. arenosus) at Crib Point, Western Port. Solid line is total proportions of ovigerous females, triangles with dashed line is proportion of ovigerous females with uneyed embryos and squares with dashed line is proportion of ovigerous females with eyed embryos.

opencc-by-4.0Dec 2009View details →

ScienceDex guides

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

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