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1,145
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1,145 results for “somatic”
Tankyrase inhibition facilitates RNA-mediated reprogramming of human somatic cells to naïve pluripotency
GEO Series GSE130162. Homo sapiens. 6 samples. Type: Methylation profiling by high throughput sequencing.
An endogenous retroviral element co-opts an upstream regulatory sequence to achieve somatic expression and mobility
GEO Series GSE285324. Drosophila melanogaster. 28 samples. Type: Expression profiling by high throughput sequencing.
NF-κB activation impairs somatic cell reprogramming in ageing [NGPS_iPSCs]
GEO Series GSE65170. Homo sapiens. 9 samples. Type: Expression profiling by array.
Activation of the LMO2 oncogene through a somatically acquired neomorphic promoter in T-Cell Acute Lymphoblastic Leukemia
GEO Series GSE94000. Homo sapiens. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Generating in vivo somatic mouse mosaics with locus-specific, stably-integrated transgenic elements for studies of gene function in development and tumorigenesis [bulk ATAC-seq]
GEO Series GSE131940. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Fig. 5 in Direct somatic embryogenesis of drought resistance pistachio (Pistacia vera L.) and expression analysis of somatic embryogenesis-related genes
Fig. 5. Longitudinal sections different developmental stages of somatic embryos in P. vera L. Sarakhs variety obtained from immature zygotic embryos under light condition: (a) Heart-shaped somatic embryos arising from epidermal cells (arrow), (b) Somatic embryos in torpedo stage (c, d) Early cotyledonary stage somatic embryo with shoot apical meristem (SAM) and no connection to vascular system (VS).
Fig. 1 in Direct somatic embryogenesis of drought resistance pistachio (Pistacia vera L.) and expression analysis of somatic embryogenesis-related genes
Fig. 1. Somatic embryos induced from immature zygotic embryos of P. vera L. Sarakhs variety after 30 days incubation in initiatioan medium and light condition. (a) Somatic embryos in globular stage, (b) Somatic embryos in heart stage, (c) Asynchronous somatic embryos, (d) Somatic embryo in torpedo stage (e) Cotyledonary somatic embryos with distinct root and shoot poles, and (f) Germinated somatic embryos (g) Acclimatized plants after transplanting for 8 weeks. Bar 2 mm.
Fig. 2 in Direct somatic embryogenesis of drought resistance pistachio (Pistacia vera L.) and expression analysis of somatic embryogenesis-related genes
Fig. 2. The effect of type and concentrations of plant growth regulators on percentage (a) and number of (b) somatic embryos developed from immature zygotic embryos of three genotypes of P. vera after 30 days under light condition. Data represented mean ± SE of three repeated experiments.
Fig. 3 in Direct somatic embryogenesis of drought resistance pistachio (Pistacia vera L.) and expression analysis of somatic embryogenesis-related genes
Fig. 3. Interaction of plant growth regoulators treatments and genotypes on adventitious shoots' percentage obtained from immature zygotic embryos of three genotypes of P.vera under light condition. Data represented mean ± SE of three repeated experiments. Treatments are included: (E1): control, without hormone, (E2): 0.01 mg L −1 IBA + 1 mg L −1 BA, (E3): 0.01 mg L −1 IBA + 2 mg L − 1 BA, (E4): 0.01 mg L −1 IBA + 3 mg L −1 BA, (E5): 0.01 mg L −1 IBA + 3 mg L −1 BA, (E12): 0.1 mg L −1 NAA + 1 mg L −1 BA, (E13): 0.01 mg L −1 NAA + 1 mg L −1 BA, (E14): 0.02 mg L −1 IBA + 0.1 mg L −1 TDZ, (E15): 0.02 mg L −1 IBA+ 0.25 mg L −1 TDZ, (E16): 0.02 mg L −1 IBA + 0.5 mg L −1 TDZ,(E17): 0.02 mg L −1 IBA + 1 mg L −1 TDZ.
Fig. 3 in Ultrastructure of somatic embryo development and plant propagation for Lachenalia montana
Fig. 3. Histological (LS) analyses of different developmental stages of somatic embryos of L. montana. Globular embryo containing meristematic cellular ovate regions (MCO) with smaller to larger isodiametric cells, intense cell division with two celled (TC) and four celled (FC) with vacuolated and intercellular space (IS) (A). The bipolar structure with both shoot (SM) and root (RM) meristems of pear-shaped (B), early torpedo-shaped (C), torpedo-shaped (D) and cotyledonary stage (E) embryos. Epidermis (EP), procambial strands (PS) and vascular tissues (VT) in SM regions of early-torpedo (F) and cotyledonary stage (G) embryos.The torpedo-shaped embryo showing RM with xylem-like pattern and root cap (RC) (H). Cotyledonary stage embryo showing RM with root hair (RH), epidermis, cortex (C) and vascular cylinder (VC) in RM regions (I). Bar (A) 500 μm, (B–E) 500 μm and (F–I) 100 μm.
Table 3 in Ultrastructure of somatic embryo development and plant propagation for Lachenalia montana
<p><b>Table 3</b> Enhancement of somatic embryos (SEs) and germination frequency in cell suspension culture from friable embryogenic callus (FEC) of L. montana.</p><table><tbody><tr><th>Sucrose (g L <i>−</i> 1) + PGR (μM) in solid MS medium</th><th>PGR (μM) in liquid MS medium</th><th>Liquid MS medium (MSL)</th><th>Number of SEs/SCV developmental stage</th><th>Germination (%)</th></tr></tbody><tbody><tr><th>6 weeks of culture</th><td>4 weeks of culture</td><td>2 weeks of culture</td><td>Globular</td><td>Different stages of embryo*</td><td></td></tr><tr><th>35 + 10 2,4-D + 2 TDZ</th><td>0.5 2,4-D + 1 BA</td><td>MSL</td><td>17.6 b</td><td>9.4 c</td><td>23.0 de</td></tr><tr><td>0.5 2,4-D + 1 <i>m</i> TR</td><td>MSL</td><td>13.2 cd</td><td>8.0 cd</td><td>22.6 e</td></tr><tr><td>0.5 2,4-D + 1 TDZ</td><td>MSL</td><td>26.0 a</td><td>19.4 a</td><td>24.2 d</td></tr><tr><td>1 2,4-D + 1 BA</td><td>MSL</td><td>10.6 e</td><td>7.4 de</td><td>24.4 d</td></tr><tr><td>1 2,4-D + 1 <i>m</i> TR</td><td>MSL</td><td>9.8 ef</td><td>6.2 e</td><td>23.7 de</td></tr><tr><td>1 2,4-D + 1 TDZ</td><td>MSL</td><td>15.4 c</td><td>9.6 c</td><td>32.0 b</td></tr><tr><td>1 2,4-D + 2 BA</td><td>MSL</td><td>7.0 gh</td><td>6.6 e</td><td>22.1 e</td></tr><tr><td>1 2,4-D + 2 <i>m</i> TR</td><td>MSL</td><td>5.6 h</td><td>7.8 de</td><td>26.9 c</td></tr><tr><td>1 2,4-D + 2 TDZ</td><td>MSL</td><td>9.0 ef</td><td>11.8 b</td><td>34.7 a</td></tr></tbody></table><p>PGR = Plant growth regulator. <sub>MSL</sub> = Liquid MS medium. SEs = Somatic embryos. SCV = Settled cell volume. *Different stages of embryo = pear-shaped, early torpedo-shaped, torpedoshaped and cotyledonary-stage embryos. Values with the means derived from 5 replicate (each 500 mg FEC) with 1000 μL SCV of embryogenic suspension cells per replicate.Mean values followed by same letters in each column are not significantly different according to the Duncan's multiple range test at 5% level.</p>
Figure 6 in Somatic musculature of Tardigrada: phylogenetic signal and metameric patterns
Figure 6. Schematic representations of musculature. A, Echiniscus testudo; B, Milnesium cf. tardigradum; C, Acutuncus antarcticus. Muscles of the ventral group are in red, their nodes are marked by hexagons; muscles of the lateral group are in blue, their attachment points and nodes are marked by squares; muscles of the dorsal group are in green, their attachment points and nodes are marked by circles. Letters and numbers identify the muscle attachment points (see text). Ph, pharynx.
Genome-wide analyses of DNA Copy Number and somatic mutations of high hyperdiploid acute lymphoblastic leukemia
<p>This is a data record for copy number analysis and somatic single nucleotide variants analysis of high hyperdiploid acute lymphoblastic leukemia (ALL) in the manuscript: Clonal origin and development of high hyperdiploidy in childhood acute lymphoblastic leukemia.</p> <p>mutations.zip included 22 samples with high hyperdiploid ALL collected from the Division of Clinical Genetics, Lund University, Sweden. All samples were subjected to whole genome sequencing and somatic variants were identified by the GDC DNA-Seq analysis pipeline (Zhang et al.,2021). The data was stored in variant call format (vcf) and the interpretation of the file is available at: https://docs.gdc.cancer.gov/Data/File_Formats/VCF_Format/.</p> <p>TAPS.zip included 577 samples with high hyperdiploid ALL that were collected from four different cohorts. All samples were genotyped using either the Affymetrix SNP Array, Illumina's BeadArray platform or the whole genome/exome sequencing. Copy number alterations analysis was performed using TAPS and the graphics produced by TAPS are available for download. The interpretation of the figure is available at: https://patchwork.r-forge.r-project.org. This dataset has been used for copy number aberrations analysis for high hyperdiploid ALL.</p> <p> </p>
Responses to Chemotherapy of Patients With Non-small Cell Lung Cancer Harboring a Known Somatic Activating HER2 Mutation
ClinicalTrials.gov study NCT02827357. IPD Sharing: NO. Countries: 0. Publications: 0.
Somatic Symptom and Related Disorders: A Treatment Group and Mixed-Methods Investigation
ClinicalTrials.gov study NCT03773354. IPD Sharing: NO. Countries: 0. Publications: 0.
Somatic Symptoms in Autism Spectrum Disorder: Data Integration
ClinicalTrials.gov study NCT05886361. IPD Sharing: Not stated. Countries: 0. Publications: 0.
Psychological Risk Factors for Functional Somatic Disorders
ClinicalTrials.gov study NCT05631860. IPD Sharing: NO. Countries: 0. Publications: 0.
Psychiatric Disorders and Functional Somatic Disorders
ClinicalTrials.gov study NCT06006715. IPD Sharing: NO. Countries: 0. Publications: 0.
Correlation Between Somatic Growth and Number of Erupted Deciduous Teeth
ClinicalTrials.gov study NCT03054571. IPD Sharing: UNDECIDED. Countries: 0. Publications: 0.
Detection and Treatment of Somatic Disease in Patients With Severe Mental Disease
ClinicalTrials.gov study NCT03428308. IPD Sharing: Not stated. Countries: 0. Publications: 0.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.