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13,587 results for “specification”
ROS-Specific Huntingtin Interactions: Chromatin Retention Assay Set-up
<p>Optimization of an assay to measure huntingtin chromatin retention in response to oxidative stress, using the YFP-tagged huntingtin-specific intrabody nucHCB2.</p>
ROS-Specific Huntingtin Interactions: Chromatin Retention of Huntingtin in PARP KO Cells
<p>Huntingtin chromatin retention in response to oxidative stress in wild type, PARP1 knockout, PARP2 knockout, and PARP1/PARP2 knockout RPE1 cells.</p>
ROS-Specific Huntingtin Interactions: Poly ADP Ribose Levels in STHdh Cells
<p>Comparison of poly ADP ribose levels in Q7/Q7 versus Q111/Q111 STHdh cells in response to oxidative stress.</p>
SocRob's ERL specific objects dataset
<p>This dataset contains the images obtained through data augmentation of segmented objects.</p> <p>Used to train the specific object detector for the following classes: coke, water, milkshake, juice, tea, apple, lemon, pear, rice, macaroni, cookies, cloth, toilet_paper, sponge, soap, cup, bowl.</p> <p>In contains augmented images (10000), source images of the objects and their segmentation labels, background images and the projection of the support surfaces where the object patches are placed in the synthesizing process.</p>
Dataset of predicted dynamic specific yield under periodic water table oscillations
<p>This dataset accompanies the submitted paper in the Water Resources Research: An approximate model for predicting the specific yield under periodic water table oscillations.</p> <p>The dataset includes 299 numerical experiments on predicting dynamic specific yield with different soil properties and different amplitudes of groundwater level oscillations. With this dataset, we proposed an approximate model for predicting the specific yield under diurnal and seasonal water level fluctuations.</p>
Artifacts: An Approach for Reviewing Security Related Apects in Agile Requirements Specifications of Web Applications
<p>Abstract—Defects in requirements specifications can have severe consequences during the software development lifecycle. Some of them result in overall project failure due to incorrect or missing quality characteristics. Security is one of those uality characteristics that need to be considered in early phases. There are several concerns that make security difficult to deal with; for instance, (1) when stakeholders discuss general requirements in (review) meetings, they are often not aware that they should also discuss security-related topics, and in the rather rare cases they are aware (2), they typically do not have sufficient security expertise. This picture is even more challenging in agile development contexts, where lightweight documentation are typically involved. To address these issues, we designed an approach that considers user stories and security specifications as input and relates those user stories to security properties via Natural Language Processing (NLP) techniques. Based on the related security properties, our approach then identifies high-level security requirements from the Open Web Application Security Project (OWASP) to be verified afterwards. In a last step, the verification of the generated security requirements is then conducted via a focused reading technique. We finally validate our approach via a controlled experiment comparing the effectiveness and efficiency of novice inspectors (we used two different groups of students) verifying security aspects in agile requirements using our generated reading techniques against using the complete list of OWASP high level security requirements and a the same list of defect types embedded in our technique. The (statistically significant) results indicate that using the reading technique has a positive impact (with large effect size) on the performance of inspectors in terms of effectiveness and efficiency. </p> <p>This repository also contains:</p> <p>Artifacts used and results of the experimental study of the paper entitled "An Approach for Reviewing Security Related Apects in Agile Requirements Specifications of Web Applications".</p>
ROS-Specific Huntingtin Interactions: Huntingtin chromatin retention dynamics by FRAP with veliparib
<p>Measurement of huntingtin chromatin recruitment dynamics by fluorescence recovery after photobleaching (FRAP) of the YFP-tagged huntingtin-specific intrabody, nucHCB2, under conditions of oxidative stress and PARP inhibition</p>
Local synaptic inputs support opposing, network-specific odor representations in a widely projecting modulatory neuron
<p>This is the data set for Zhang et al. 2019 "Local synaptic inputs support opposing, network-specific odor representations in a widely projecting modulatory neuron" published at eLife.</p>
Maternal antibodies provide strain-specific protection against infection with the Lyme disease pathogen in bank voles
<p>Raw data for manuscript titled, "Maternal antibodies provide strain-specific protection against infection with the Lyme disease pathogen in bank voles". This manuscript was submitted to Applied and Environmental Microbiology and was assigned the manuscript ID number AEM01887-19R1.</p>
data set related to article A Nervous System-Specific Model of Creatine Transporter Deficiency Recapitulates the Cognitive Endophenotype of the Disease: a Longitudinal Study
<p>This record contains raw data related to article A Nervous System-Specific Model of Creatine Transporter Deficiency Recapitulates the Cognitive Endophenotype of the Disease: a Longitudinal Study</p>
ROS-Specific Huntingtin Interactions: PAR overlay assay with PBM3 peptide mutant
<p>Poly-ADP ribose overlay assay with huntingtin PBM peptides to test ability of a PBM3 alanine mutant to bind poly-ADP ribose.</p>
ROS-Specific Huntingtin Interactions: Chromatin retention assay with huntingtin fragments containing PBM3
<p>Huntingtin amino acids 1790-1798 make up a potential PAR binding motif (PBM3). Two huntingtin fragments (1208-1810 and 1775-2413) were tested for chromatin retention upon oxidative stress.</p>
ROS-Specific Huntingtin Interactions: Summary of PAR binding for different huntingtin protein preps
<p>PAR overlay assay with different preparations of huntingtin has yielded variable results. These results are summarized.</p>
CXCR4 antibody specific staining
<p>CXCR4 antibody (#PA3305, Invitrogen Inc., USA) is truly reacting to the antigens in question (specific staining). </p> <p>Tissue: Oral cancer (20X magnification).</p> <p> </p>
Keratinocytes derived from patient-specific iPSCs recapitulate the genetic signature of psoriasis disease
<p>Induced pluripotent stem cells (iPSCs) were generated from control (Ctrl) and two psoriasis patients (PsO1 and PsO2) having genetic background of psoriasis. The iPSCs were differentiated into epidermal keratinocytes as described in the article entitled "Keratinocytes derived from patient-specific iPSCs recapitulate the genetic signature of psoriasis disease" by Gowher et al. The dataset represent RNA-seq data generated from keratiocytes derived from ctrl-iPSCs and psoriasis patients iPSCs (PsO1 and PsO2).</p> <p>The file name is : Sample name with replicate_overall sample number_read direction_001 where:</p> <p>- Ctrl Rep1 and Ctrl Rep2: Keratinocytes derived from control (Ctrl-iPSCs). </p> <p>- PSO1 Rep1 and PSO1 Rep2: Keratinocytes derived from psoriasis patient iPSCs (PSO1-iPSCs)</p> <p>- PSO2 Rep1 and PSO2 Rep2: Keratinocytes derived from psoriasis patient iPSCs (PSO2-iPSCs).</p> <p>- RNA-seq data was generated from two biological repliicates (Rep1 and Rep2).</p> <p>- Read direction: R1 (Forward), R2 (Reverse).</p> <p> </p>
ROS-Specific Huntingtin Interactions: PAR overlay slot blotting optimization
<p>Optimization to find conditions allowing quantification of huntingtin PAR binding in the PAR overlay assay.</p>
ROS-Specific Huntingtin Interactions: Competition of huntingtin PAR binding by PBM3 peptide
<p>Attempts to use the PBM3 peptide in a competition assay to measure the on-off rates of huntingtin PAR binding.</p>
ROS-Specific Huntingtin Interactions: Testing PARG activity in HD patient fibroblasts
<p>Comparison nuclear PAR levels in wild type and HD (TruHD) fibroblasts in response to a PARG inhibitor concentration gradient (as a measure of PARG activity).</p>
Fig. 1 in Association of bat flies (Diptera: Streblidae) and bats: Richness and host specificity in Western Mexico
Fig. 1. Location of the streblid collection sites between 2012 and 2022.
Ion-specific water structures at a metal surface and its effect on the hydrogen production
<p>Here lies the tabulated data used to create the Figures for the Nature Communications manuscript NCOMMS-23-54843A titled "Ion-specific water structures at a metal surface and its effect on the hydrogen production".</p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.