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2,326 results for “clusters”
Bioenergetic cluster analysis – mitochondrial respiratory control in human fibroblasts
<p>Gnaiger E (2021) Bioenergetic cluster analysis – mitochondrial respiratory control in human fibroblasts. MitoFit Preprints 2021.8. doi:10.26124/mitofit:2021-0008 - https://www.mitofit.org/index.php/Gnaiger_2021_MitoFit_BCA</p> <p>All respirometric data that were used for meta-analysis are obtained from the original publications, were converted to SI units, and are available here as a basis for bioenergetic cluster analysis. Inverted regression analysis is illustrated by an example (Figures 1c and d).</p>
Data Release of Cosmic evolution of the incidence of Active Galactic Nuclei in massive clusters: Simulations versus observations
<p>Dataset of the paper "Cosmic evolution of the incidence of Active Galactic Nuclei in massive clusters: Simulations versus observations".</p> <p> </p> <p>All the necessary code to deal with these data can be found in: https://github.com/IvanMuro/agn_frac_data_release</p>
Foodscapes - A global clustering of terrestrial food production systems
<p>This repository contains the final outputs from the global <strong>Foodscape</strong> mapping exercise. In this project we aimed to identify broad homologues of foodscape classes, comparable in a minimum set of biophysical and management characteristics, would help to design possible interventions and leverage points for more sustainable agriculture.</p> <p>Provided are maps in spatial geotiff format (.tif) which can be opened in any typical GIS software such as ArcGIC or QGIS. The Resolution is 0.5' degree (WGS 84 or <em>longitude-latitude</em> projection). Both the foodscape map (<em>Foodscapes_combinedGEOTIFF_final.tif</em>) and a reclassified intensity map (<em>Foodscapes_combinedGEOTIFF_intensity.tif</em>) are provided. Accompanied with the tif files are .clr and .qml files, both of which provide layout information on colours used for each code combination in the global maps. The .qml file will be automatically loaded when opening the layer in QGIS.<br> In addition, in the Microsoft Excel sheet "<em>Foodscapes_combinedLEGEND_final.xlsx</em>" a legend with qualitative description and label of each class is provided.</p> <p>If you use this layer in any way, please cite this repository and the describing <a href="https://osf.io/puyzw/">preprint</a>.</p>
Hubble and Webb Space Telescope data for the cluster field RXJ-2129
<p>This repository contains reduced image mosaics from the Hubble and Webb Space Telescopes of the galaxy cluster RXJ-2129.</p> <p>Data were processed with the <a href="https://github.com/gbrammer/grizli">grizli</a> software pipeline, as described by <a href="https://arxiv.org/abs/2302.10936">Valentino et al. (2023, ApJ, in press)</a>, with the software and observatory calibrations available as of October 2022.</p> <p>For a given broad-band filter, the science data are given in the "sci.fits" files. Inverse variance weight images are provided in the "wht.fits" files. </p> <p>Aperture photometry following the methodology described by Valentino et al. is provided in "rxj2129-grizli-v4.0-fix_phot_apcorr.fits", and photometric redshift estimates derived with the <a href="https://github.com/gbrammer/eazy-py/">eazy-py </a>software are tabulated in "rxj2129-grizli-v4.0-fix.zout.fits".</p>
Dataset for Measurement report: Ion clusters as indicator for local new particle formation
<p>Data for Measurement report: Ion clusters as indicator for local new particle formation. There are two files, negative_ion_concentrations.csv and positive_ion_concentrations.csv. The former (latter) includes absolute number concentrations for 1.87, 2.16, 2.49, and 2.88 nm negative (positive) ions. The unit for these concentrations is #/cm<sup>-3</sup>.</p> <p>Contact Santeri Tuovinen (santeri.tuovinen@helsinki.fi) for more details.</p>
Magellan/M2FS and MMT/Hectochelle Spectroscopy of Dwarf Galaxies and Faint Star Clusters within the Galactic Halo
<p>m2fs_HiRes_catalog_public.fits: public catalog of measurements derived from spectroscopic observations of individual targets with the Magellan/M2FS spectrograph in HiRes configuration</p> <p>m2fs_MedRes_catalog_public.fits: public catalog of measurements derived from spectroscopic observations of individual targets with the Magellen/M2FS spectrograph in MedRes configuration</p> <p>hecto_catalog_public.fits: public catalog of measurements derived from spectroscopic observations of individual targets with the MMT/Hectochelle spectrograph</p> <p>fits_files.tar.gz: Supplementary data products, including all sky-subtracted spectra from individual targets and best-fitting model spectra.</p> <p>template_spectra.tar.gz: synthetic template spectra (columns are wavelength in air (Angstroms), normalized flux)</p>
Supplementary Movies and Source Data for: Quantitative real-time in-cell imaging reveals heterogeneous clusters of proteins prior to condensation
<p>Supplementary Movies and raw data for the manuscript: "Quantitative real-time in-cell imaging reveals heterogeneous clusters of proteins prior to condensation":</p> <p>Source_Data.zip: Supplementary Code, Supplementary Data and Weka Analysis</p> <p>Lan_supplementary_movies_AVI.zip: Supplementary movies as AVI</p> <p>Lan_supplementary_movies_MP4.zip: Supplementary movies as MP4</p> <p>Lan_raw_movies.zip: Raw TIFF stacks of the movies.</p> <p>Lan_supplementary_movies.zip: Old version of the movies.</p>
Test clustered weather dataset for s2spy workflow
<p>This dataset contains sea surface temperature (SST) over the Pacific and clustered 2 meter temperature (T2M) over North America. It is used in the example workflow of s2spy/lilio packages. The fields used here are processed outputs from the original ERA5 dataset.</p> <p>More details about how this dataset was generated can be found via this link: https://github.com/AI4S2S/cookbook/tree/main/data</p> <p>About the usage of this dataset in the example machine learning workflow of s2spy/lilio, check this link:https://github.com/AI4S2S/cookbook</p> <p>Data used here is generated using Copernicus Climate Change Service information and for more information about licensing, please check the Licence Agreement (https://cds.climate.copernicus.eu/cdsapp/#!/terms/licence-to-use-copernicus-products) for Copernicus Products.</p>
Benne: A Modular Data Stream Clustering Algorithm with Flexible Design Choices
<p>All of the source dataset with preprocessed format [id features class] that have been used for evaluation in the paper.</p>
CLUSTER Data Catalogue
<p>This data catalogue describes the key metadata for all the CLUSTER datasets. For all datasets, the number of patients, treatment and timepoints available are described, In addition, for GWAS and omics datasets, tissue type, cell population, analysis platform and number of samples are provided.</p> <p>We are open to collaborating and sharing data with researchers who have research questions that may be answered by our data. Access to CLUSTER data is regulated according to the conditions of patient consent, study ethics and the CLUSTER Consortium’s policies. Access is available to researchers via an application to the CLUSTER data access committee - more details are available on <a href="http://www.clusterconsortium.org.uk">CLUSTER's website</a></p>
Multivariate analysis of FcR-mediated NK cell functions identifies unique clustering among humans and rhesus macaques - dataset
<p>Dataset from Tuyishime M, Spreng RL, et al. Multivariate analysis of FcR-mediated NK cell functions identifies unique clustering among humans and rhesus macaques. Frontiers in Immunology 2023 doi: 10.3389/fimmu.2023.1260377</p>
Metagenomic assembly and bin3C clustering result for a healthy human faecal microbiome transplant donor
<p>Metagenomic WGS assembly and Hi-C deconvolution of a healthy human faecal microbiome transplant donor.</p> <p>Metagenomic assembly was produced using Spades (v3.13.1).</p> <p>Extracted MAGs were produced using bin3C (v0.3.3) and QC'd using CheckM (v1.0.18).</p>
LiDAR Cluster Statistic of Wind Turbine Wakes
<p>Mean and standard deviation of the wake velocity field generated by utility-scale wind turbines for different turbulence intensity of the incoming wind and rotor thrust coefficient. Statistics are retrieved from wind LiDAR measurements. More details in this paper https://onlinelibrary.wiley.com/doi/full/10.1002/we.2430 </p>
Characteristic and spatiotemporal variation of air pollution in Northern China based on correlation analysis and clustering analysis of five air pollutants
<p>original daily data for 'Characteristic and spatiotemporal variation of air pollution in Northern China based on correlation analysis and clustering analysis of five air pollutants'</p>
Reproduction package for the paper "Near-ultraviolet detections of four dwarf nova candidates in the globular cluster 47 Tucanae"
<p>This is a basic reproduction package for the paper "Near-ultraviolet detections of four dwarf nova candidates in the globular cluster 47 Tucanae" by <a href="https://www.aanda.org/articles/aa/abs/2020/02/aa37043-19/aa37043-19.html">Modiano et al. (2020)</a>. It aims to provide the most important data products to check and reproduce the main results of the paper.</p>
Cluster randomized controlled trial evaluating the impact on children's linear growth of an unconditional cash transfer program implemented in rural areas of North Togo
<p>A parallel cluster randomized controlled trial was implemented in North Togo. 162 rural landlocked villages were randomized into either an intervention arm (cash transfers + package of community activities, <em>n</em>=82) or a control arm (package of community activities only, <em>n</em>=80). </p> <p>Two different representative samples of children aged 6-29 months and their mothers were surveyed, one before the intervention (2014, <em>n</em>=2,658), the other two years afterwards (2016, <em>n</em>=2,031).</p> <p>You will found here:</p> <ul> <li>Two datasets, fully anonymized (French, CSV files): one for observations on households and the other for observations on mother-child pairs</li> <li>Two dictionaries of variables (French, Excel files): one for the household database and the other for the mother-child pairs database</li> <li>The study protocol as submitted to the Ministry of Health of Togo (French, PDF)</li> <li>The technical and financial proposal (to evaluate the CT program) as submitted to funders (English, PDF)</li> </ul> <p> </p>
List of VLFEs obtained in the paper "Influence of a subducted oceanic ridge on the distribution of shallow VLFEs in the Nankai Trough as revealed by moment tensor inversion and cluster analysis"
<p>List of VLFEs obtained in Toh et al., (2020, GRL).</p> <p>"Influence of a subducted oceanic ridge on the distribution of shallow VLFEs in the Nankai Trough as revealed by moment tensor inversion and cluster analysis" by Akiko Toh, Wan-Jou Chen, Nozomu Takeuchi, Douglas Dreger, Wu-Cheng Chi, and Satoshi Ide. </p> <p> </p>
Cluster der Reiseberichts-Topik mit Hervorhebung der Brückentopoi (Abb. 1)
<p>Diese Abbildung ist Teil des folgenden Buchs: <a href="https://www.transcript-verlag.de/978-3-8376-5227-7/topik-zwischen-modellierung-und-operationalisierung/">https://www.transcript-verlag.de/978-3-8376-5227-7/topik-zwischen-modellierung-und-operationalisierung/</a>. Die Darstellung ist inhaltlich identisch mit Abb. 1 des verlinkten Buchs, wird jedoch hier als unzerteilte Visualisierung in einer Querformatansicht zugänglich gemacht.</p> <p>Die Studie analysiert Topoi als dynamische Kristallisationspunkte, über die sich argumentative Muster begreifen lassen. Es wird ein Ansatz verfolgt, der die Relationalität und Kombinatorik zentral setzt: Topoi sind nicht isoliert wirksam, sondern treten in konkreten sprachlichen Zusammenhängen kombiniert auf; sie sind in <em>Topiken</em> verankert, die mittels der Topik als Heuristik untersucht werden. Für das Untersuchungskorpus von rund 40 Indienreiseberichten um 1900 wurden in der (Re‑)Konstruktionsarbeit zwei <em>Topiken</em> als relevant erachtet: Die Indien-<em>Topik</em> setzt sich aus 86 Topoi zusammen, die zur topischen Stabilisierung eines imaginären ‚Indien‘ um 1900 beitragen, wohingegen die Reiseberichts-<em>Topik</em> eine Konstellation von 67 Topoi bildet, die als charakteristisch für die Textsorte Reisebericht um 1900 gelten können. Um mit einer solchen Menge an Topoi analytisch-interpretativ arbeiten zu können, erfolgt in einem weiteren Schritt die Clusteranalyse, in deren Rahmen funktional homogene Topoi zu Clustern gruppiert werden.</p> <p>Diese Visualisierung bildet die 67 Topoi systematisch ab und veranschaulicht einen zentralen Befund: Die der Reiseberichts-<em>Topik</em> inhärente Kohärenz ist vor allem über die hier hervorgehobenen Brückentopoi gewährleistet, die funktional mehreren Clustern zugeordnet sind.</p> <p>Die Graphik wurde mit der Visualisierungs- und Analysesoftware VUE (= <em>Visual Understanding Environment</em>, ein Open Source Projekt der Tufts University, <a href="https://vue.tufts.edu/">https://vue.tufts.edu/</a>) erstellt.</p>
A Clustering-Based Approach for Visual Debugging of Concurrent Java Programs
<p>Supplementary Material to: A Clustering-Based Approach for Visual Debugging of Concurrent Java Programs</p>
Magellan/M2FS Spectroscopy of Galaxy Clusters: Stellar Population Model and Application to Abell 267
<p>supplementary data products, including all sky-subtracted spectra from individual galaxies, as well as random draws from posterior PDFs for model parameters (see included README file)</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.