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2,100 results for “nodes”
cross-correlations of seismic data nodes Lipari 2018
<p>Stacked cross-correlation functions of the continuous seismic data recorded at the nodes installed at Lipari in 2018. Data in SAC format. All details about stations (name, latitude longitude, elevation) and data ( sampling rate, starting and ending time, etc) are in the HEADER of each file.</p>
Weighted Link Schedules in 100-node Fixed Topology Wireless Networks
<p>This is a data repo for the data samples used for learning the link scheduling in a fixed-topology placed networks. This data set contains samples for 100-node networks, and the scheduling decisions are made from delayed column generation (DCG) algorithm.</p>
Multiplex imaging of breast cancer lymph node metastases identifies prognostic single-cell populations independent of clinical classifiers
<p>This repository contains the raw IMC data of ZTMA 26 as continuation of dataset <strong>10.5281/zenodo.7494413.</strong> The zip files starting with ZTMA contain the raw IMC measurements (mcd and txt) of those parts of the TMA. The TMA measurements are split up into parts in order to avoid huge files.</p> <p>Additionally, this repository contains the metadata of the patients analyzed in this study, the panel information and the single-cell data that was extracted from the multiplexed images together with the associated metadata in SingleCellExperiment format for analysis in R.</p> <p>The analysis.zip folder contains files that were written out during the analysis according to the scripts in https://github.com/BodenmillerGroup/BC_LN_metastses.</p> <p>The single-cell and other data outputs from CellProfiler can be found in the cpout.zip file.</p> <p>The IF_whole_sections.zip file contains the IF images of the primary breast cancer sections (czi files) and the extracted single-cell data.</p>
Multiplex imaging of breast cancer lymph node metastases identifies prognostic single-cell populations independent of clinical classifiers
<p>This repository contains the raw IMC data of ZTMA 21 and 25 of the matched primary breast cancer and lymph node metastasis study presented in Fischer and Jackson et al., 2023. The code that was used to process and analyze this data can be found at https://github.com/BodenmillerGroup/BC_LN_metastses.</p> <p>The zip files starting with ZTMA contain the raw IMC measurements (mcd and txt) of the respective parts of the TMA. The TMA measurements are split up into parts in order to avoid huge files.</p>
Weighted Link Schedules in sub-100 node Random Topology Wireless Networks
<p>This is a data repo for the data samples used for learning the link scheduling in a randomly placed networks. This data set contains samples for sub 100-node networks, and the scheduling decisions are made from delayed column generation (DCG) algorithm.</p>
Weighted Link Schedules in sub-100 node Fixed Topology Wireless Networks
<p>This data repo contains the link schedules in a multi-hop wireless networks that aims to maximize the weighted throughput. Each instance is represented by a numpy data file that contains the necessary data fields to reconstruct the original problem instance.</p> <p> </p> <p>Note: 100_7_new.tar.xz should be in the repo https://zenodo.org/deposit/7671940.</p>
RNAseq transcriptome of draining lymph node (LN) and tumor of MC38 murine tumors treated with cryoablation and chitosan/IL-12
<p class="MsoNormal">Focal ablation technologies are routinely used in the clinical management of inoperable solid tumors but often result in incomplete ablations leading to high recurrence rates. Adjuvant therapies capable of safely eliminating residual tumor cells are therefore of great clinical interest. Interleukin 12 (IL-12) is a potent antitumor cytokine that can be localized intratumorally through coformulation with <span>viscous biopolymers</span> including chitosan (CS) solutions. The objective of this research was to determine if localized immunotherapy with CS/IL-12 could prevent <span>tumor recurrence after cryoablation (CA). Tumor recurrence, overall survival, and protective immunity were assessed. Systemic immunity was evaluated in spontaneously metastatic and bilateral tumor models. Temporal bulk RNA sequencing was performed on tumor and draining lymph node samples.</span> In multiple murine tumor models, the addition of CS/IL-12 to CA reduced recurrence rates by 30–55%. Altogether, this cryo-immunotherapy induced complete durable regression of large tumors in 80–100% of treated animals. <span>Mice</span> treated with CA plus adjuvant CS/IL-12 were partially or completely protected from tumor rechallenge. <span>Systemically,</span> CS/IL-12 prevented lung metastases when delivered as a neoadjuvant to CA. However, CA plus CS/IL-12 had minimal antitumor activity against established, untreated abscopal tumors. Adjuvant anti-PD-1 therapy delayed the growth of abscopal tumors. Transcriptome analyses revealed early immunological changes in <span>the dLN</span>, followed by a significant increase in gene expression associated with immune suppression and regulation. Cryo-immunotherapy with localized CS/IL-12<span> reduces recurrences and</span> enhances the elimination of large primary tumors<span>. This focal combination therapy also induces significant systemic</span> antitumor immunity <span>although further studies are necessary</span>.</p>
Transcriptomics and proteomics reveal distinct biology for lymph node metastases and tumor deposits in colorectal cancer
<p>Spatial transcriptomic data (counts_DSP_afterQC_normalisation.csv) derived using the Nanostring GeoMx digital spatial profiler platform to analyse tumor deposits and lymph node metastases from 10 patients with colorectal cancer. 264 AOIs of cancer transcriptome atlas data. Normalised using Q3 normalisation, for further information on methods see associated publication. </p>
Parallel and shared glosses to the first book of the Etymologiae [edge and node tables]
<p>This record contains the node table and the edge table for plotting and analyzing the co-occurrence network of glossed manuscripts transmitting the first book of the <em>Etymologiae</em> of Isidore of Seville. This data is used in:</p> <p><br> Evina Stein. ‘Parallel Glosses, Shared Glosses, and Gloss Clustering: Can Network-Based Approach Help Us to Understand Organic Corpora of Glosses?’, <em>Journal of Historical Network Research</em> 9 (2023), 36-116.</p> <p>Abstract: Glossing was an important element of medieval western manuscript culture. However, glosses are notoriously difficult to analyze because of their triviality, fluid nature, heterogeneity of origin, complex transmission histories, and anonymity. Traditional scholarly approaches such as close reading and the genealogical method often do not produce satisfactory results, especially in the case of gloss corpora that are highly organic, i.e., display the traits listed above to a significant degree. This article outlines a method for analyzing the organic corpora of glosses based on their treatment as networks. The theoretical model for the proposed method is the co-occurrence network, a network model in which relationships between entities (nodes) are established based on certain shared properties or constituent elements (edges). In the case of corpora of glosses, glossed manuscripts are assumed as nodes, and the glosses that specific manuscripts have in common constitute the edges between them. Since gloss parallelism can arise through different processes, including randomness, the article describes two strategies that reduce such noise so that the transmission of glosses can be effectively examined. The method is demonstrated on a representative corpus – the early medieval glosses to the first book of the <em>Etymologiae</em> of Isidore of Seville.</p> <p> </p>
Seismic node array data for iMUSH shot Y4
<p>Matlab file containing waveform data with a sample rate of 250 Hz from 20 s before to 120 s after shot Y4.</p>
Trial of Lymphoseek in Intraoperative Localization of Lymph Nodes in Breast Cancer and Melanoma
ClinicalTrials.gov study NCT00671918. IPD Sharing: Not stated. Countries: 2. Publications: 48.
A Deep Learning Model for Diagnosing Lymph Node Metastasis in Nasopharyngeal Carcinoma(NPC)
ClinicalTrials.gov study NCT06829147. IPD Sharing: NO. Countries: 1. Publications: 24.
Atezolizumab Before and/or With Chemoradiotherapy in Immune System Activation in Patients With Node Positive Stage IB2, II, IIIB, or IVA Cervical Cancer
ClinicalTrials.gov study NCT03738228. IPD Sharing: Not stated. Countries: 1. Publications: 1.
Hormone Therapy With or Without Combination Chemotherapy in Treating Women Who Have Undergone Surgery for Node-Negative Breast Cancer (The TAILORx Trial)
ClinicalTrials.gov study NCT00310180. IPD Sharing: Not stated. Countries: 8. Publications: 11.
Real-time Lymphatic Channel Visualization Improves Bilateral Sentinel Lymph Node Detection in Endometrial Cancer
ClinicalTrials.gov study NCT05191212. IPD Sharing: NO. Countries: 1. Publications: 3.
The T-REX Trial: Tailored Regional External Beam Radiotherapy in Clinically Node-negative Breast Cancer Patients With 1-2 Sentinel Node Macrometastases.
ClinicalTrials.gov study NCT05634889. IPD Sharing: YES. Countries: 2. Publications: 1.
Surgery to Remove the Sentinel Lymph Node and Axillary Lymph Nodes After Chemotherapy in Treating Women With Stage II, Stage IIIA, or Stage IIIB Breast Cancer
ClinicalTrials.gov study NCT00881361. IPD Sharing: Not stated. Countries: 1. Publications: 5.
Concurrent Use Lymphoseek & Indocyanine Green in Sentinel Lymph Node Detection in Endometrial Cancer
ClinicalTrials.gov study NCT04511026. IPD Sharing: NO. Countries: 1. Publications: 1.
Use of Sentinel Lymph Node Biopsy in Patients With Early-Stage, Palpable Node-Positive HR+/HER2- Breast Cancer Having Upfront Surgery and Adjuvant Radiation
ClinicalTrials.gov study NCT04854005. IPD Sharing: YES. Countries: 1. Publications: 0.
Robotic-Assisted Laparoscopic Extended Pelvic Lymph Node Dissection for Transitional Cell Carcinoma of the Bladder
ClinicalTrials.gov study NCT00963859. IPD Sharing: Not stated. Countries: 1. Publications: 1.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.