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8,729 results for “Ranges”
Data from: Multispecies forest plantations outyield monocultures across a broad range of conditions
<p>Data from: Multispecies forest plantations outyield monocultures across a broad range of conditions (doi: 10.1126/science.abm6363).</p>
Range-wide habitat use of the Harpy Eagle indicates four major tropical forest gaps in the Key Biodiversity Area network
<p>Quantifying habitat use is important for understanding how animals meet their requirements for survival and provides information for conservation planning. Currently, assessments of range-wide habitat use that delimit species distributions are incomplete for many taxa. The Harpy Eagle (Harpia harpyja) is a raptor of conservation concern, widely distributed across Neotropical lowland forests, that currently faces threats from habitat loss and fragmentation. Here, we use penalized logistic regression to identify species-habitat associations and predict habitat suitability based on a new International Union for the Conservation of Nature range metric, termed Area of Habitat. From the species-habitat model, we performed a gap analysis to identify areas of high habitat suitability in regions with limited coverage in the Key Biodiversity Area (KBA) network. Range-wide habitat use indicated that Harpy Eagles prefer areas of 70-75% evergreen forest cover, low elevation, and high vegetation species richness. Conversely, Harpy Eagles avoid areas of >10% cultivated landcover and mosaic forest, and topographically complex areas. Our species-habitat model identified a large continuous area of potential habitat across the pan-Amazonia region, and a habitat corridor from the Chocó-Darién ecoregion of Colombia running north along the Caribbean coast of Central America. Little habitat was predicted across the Atlantic Forest biome, which is now severely degraded. The current KBA network covered 18% of medium to high Harpy Eagle habitat exceeding a target biodiversity area representation of 10%, based on species range size. Four major areas of high suitability habitat lacking coverage in the KBA network were identified in north and west Colombia, western Guyana, and north-west Brazil. We recommend these multiple gaps of habitat as new KBAs for strengthening the current KBA network. Modelled area of habitat estimates as described here are a useful tool for large-scale conservation planning and can be readily applied to many taxa.</p>
Data from: Occurrence-habitat mismatching and niche truncation when modelling distributions affected by anthropogenic range contractions
<p><strong>Aims: </strong>Human-induced pressures such as deforestation cause anthropogenic range contractions (ARCs). Such contractions present dynamic distributions that may engender data misrepresentations within species distribution models. The temporal bias of occurrence data—where occurrences represent distributions before (past bias) or after (recent bias) ARCs—underpins these data misrepresentations. Occurrence-habitat mismatching results when occurrences sampled before contractions are modelled with contemporary anthropogenic variables; niche truncation results when occurrences sampled after contractions are modelled without anthropogenic variables. Our understanding of their independent and interactive effects on model performance remains incomplete but is vital for developing good modelling protocols. Through a virtual ecologist approach, we demonstrate how these data misrepresentations manifest and investigate their effects on model performance.</p> <p><strong>Location:</strong> Virtual Southeast Asia</p> <p><strong>Methods:</strong> Using 100 virtual species, we simulated ARCs with 100-year land-use data and generated temporally biased (past, recent) occurrence datasets. We modelled datasets with and without a contemporary land-use variable (conventional modelling protocols) and with a temporally dynamic land-use variable. We evaluated each model's ability to predict historical and contemporary distributions.</p> <p><strong>Results:</strong> Greater ARC resulted in greater occurrence-habitat mismatching for datasets with past bias and greater niche truncation for datasets with recent bias. Occurrence-habitat mismatching prevented models with the contemporary land-use variable from predicting anthropogenic-related absences, causing overpredictions of contemporary distributions. Although niche truncation caused underpredictions of historical distributions (environmentally suitable habitats), incorporating the contemporary land-use variable resolved these underpredictions, even when mismatching occurred. Models with the temporally dynamic land-use variable consistently outperformed models without.</p> <p><strong>Main conclusions:</strong> We showed how these data misrepresentations can degrade model performance, undermining their use for empirical research and conservation science. Given the ubiquity of anthropogenic range contractions, these data misrepresentations are likely inherent to most datasets. Therefore, we present a three-step strategy for handling data misrepresentations: maximise the temporal range of anthropogenic predictors, exclude mismatched occurrences, and test for residual data misrepresentations.</p>
Data and code for: Climate change expected to improve digestive rate and trigger range expansion in outbreaking locusts
<p>Data and code for "Climate change expected to improve digestive rate and trigger range expansion in outbreaking locusts," accepted in <em>Ecological Monographs</em></p>
Data from: Coyote diet in North America: geographic and ecological patterns during range expansion
<p>This dataset was used to review and analyze coyote diets across North America in "Coyote diets in North America: geographic and ecological patterns during range expansion" by Jensen et al. in Mammal Review. We only include data from studies that reported data as percent frequency of occurrence and from multiple seasons. We ultimately used 93 of the included studies (294 seasonal records) in our analyses.</p>
Invasive brown widow spiders disperse aerially under a broad range of environmental conditions
<p>Spiders commonly disperse on silk lines as juveniles by means of rappelling or ballooning. These modes of dispersal, especially long-distance dispersal via ballooning, can greatly increase the distance an individual can move, and at the population level, the speed of range expansion and likelihood of gene flow. Nevertheless, few studies have examined how spiders disperse under field conditions, and which environmental and meteorological conditions may affect their decision to disperse. We tested dispersal by spiderlings of the invasive brown widow (<em>Latrodectus geometricus</em>) under field conditions in the Negev Desert of Israel. We documented pre-dispersal (climbing and tiptoeing) and dispersal (short-distance dispersal by rappelling and long-distance dispersal by ballooning) behaviours during the day (n = 147 spiders) and night (n = 171 spiders), while recording wind speed, temperature, and humidity. We found that spiders ballooned significantly more during the day (14.3%) compared with 1.8% of spiders ballooning at night. At night, spiders were more likely to disperse in conditions of higher wind speeds, lower temperature, and higher humidity, whereas during the day, environmental factors were less predictive of dispersal behaviour. In addition, we found significant differences in the proportion of spiderlings showing pre-dispersal and dispersal behaviour depending on family line. In conjunction with human-mediated dispersal, ballooning and rappelling may be an important mechanism of range expansion in the brown widow spider. Understanding the environmental and genetic factors affecting dispersal may lead to better management of invasive species.</p>
Riding an escalator: upward range shift and patterns of genetic response to climate change in Acer caudatifolium
<p><strong>Aim </strong></p> <p>Rapid global warming is threatening global biodiversity, and it will likely lead to varying degrees of local adaptation, particularly among plant species. Besides, rising temperatures frequently result in upslope distribution shifts towards climatic optima (i.e., the escalator effect) within a limited dispersal space, such as in insular environments. Here, we integrated ecological and genetic approaches to investigate how climate change will impact the genetic compositions and spatial distributions of Taiwan endemic maple <em>Acer caudatifolium</em>.</p> <p><strong>Location </strong></p> <p>Taiwan</p> <p><strong>Methods </strong></p> <p>We estimate the distribution range shifts of <em>A. caudatifolium</em> under climate change through species distribution modeling (SDM). We also use 368 genotyped samples to infer dispersal and genetic hotspots and quantify the contributions of geography/environments to genetic variations. We further assess the potential risk to <em>A. caudatifolium</em> under different climate warming scenarios.</p> <p><strong>Results </strong></p> <p>We detected three genetic diversity hotspots near mountainous glacial refugia and two dispersal hotspots in northern Taiwan and the central-to-southern Central Mountain Range. Overall range reductions and an altitudinal upslope-shift were observed in SDM. Using both linear and nonlinear regression approaches, we found that genetic variation was significantly associated with geographic distance and elevation-related climatic variables. The potential risk analysis revealed that the northernmost summit-dwelling populations were the most vulnerable. Furthermore, the major risk factor differed among populations: for central populations, temperature and precipitation jointly determined the potential risk, whereas precipitation was the only risk factor for northern and southern populations.</p> <p><strong>Main conclusions</strong></p> <p>This case study demonstrates how various climate factors, mountain height, and the availability of corridors jointly determine the demographic fates and sustainability of island maples in the face of climate change. This study also provided estimates of the implications of global warming, which can be conducive to developing appropriate conservation strategies.</p>
Data supporting: Drivers of individual-based, antagonistic interaction networks during plant range expansion
<p><span>1. Range expansion in plant populations, especially at the colonization front, can be either limited by disproportionately large effects of antagonistic interactions or facilitated by their release. How the strength of antagonistic interactions changes along successional gradients during range expansion is still poorly documented, especially when diverse assemblages of plant antagonists (rodents, invertebrates, and birds) combine within interaction networks.</span></p> <p><span>2. We study the changes in individual-based, predispersal seed-pulp predator networks along a colonization gradient in a rapidly-expanding <em>Juniperus phoenicea</em> population in Doñana National Park (SW Spain). Additionally, we analysed the role of individual plant traits and neighbourhood attributes in network configuration by using Exponential Random Graph Models.</span></p> <p><span>3. Seven seed-pulp consumer animal species varied significantly in their frequency of interaction and prevalence. While invertebrate species were well established in old and intermediately mature stands, greenfinch (<em>Chloris chloris</em>) was dominant at the colonization front. Variable species roles and spread of interactions among individual plants generated changes in the configuration of interactions during plant expansion.</span></p> <p><span>4. Individual plant traits strongly determined the topology of these networks, although with differences between stands. Increasing individual crop size and seeds per cone increased the interaction odds of individual plants, while seed viability showed the opposite effect. The network topology at the colonization front appeared less driven by individual traits, possibly because of the short interaction history of this recently established area. The disproportionately large effect of <em>C. chloris</em> in these recently established stands, potentially resulted in large seed losses during range expansion.</span></p> <p><span>5.</span><em><span> Synthesis</span></em><span>. Turnover of antagonistic interactions, characterized the colonization front, resulting in more heterogeneous interaction strengths among individual plants. We found no evidence for a complete or sizeable antagonistic release of <em>J. phoenicea</em> at the colonization front promoting this rapid expansion. It becomes necessary to explore interactions with seed dispersers to understand how antagonistic and mutualistic plant-animal interactions balance during range expansion. Our study highlights the importance of an individual-based approach in understanding how interactions are structured and driven in natural changing landscapes.</span></p>
Short-range C-signaling restricts cheating behavior during Myxococcus xanthus development
<p>Starving <em>Myxococcus xanthus</em> bacteria use short-range C-signaling to coordinate building of multicellular mounds with differentiation from rods into spores during fruiting body development. A <em>csgA</em> mutant deficient in C-signaling can cheat on wild type (WT) in mixtures and form spores disproportionately, but our understanding of cheating behavior is incomplete. We report that cheating requires excess WT cells in the initial mixture and occurs during the mound-building phase of development. We subjected mixtures of WT and <em>csgA</em> cells at different ratios to co-development, and used confocal microscopy and image analysis to quantify the arrangement and morphology of cells near the bottom of nascent fruiting bodies (NFBs). At a ratio of one WT to four <em>csgA</em> cells (1:4), NFBs failed to form. At 1:2, broad mounds formed with half the normal cell density and very few spores. At 1:1, NFBs formed normally with a similar number of WT and <em>csgA</em> rods early in development and a similar number of spores later, so C-signaling by WT rescued <em>csgA </em>development efficiently, but the mutant<em> </em>did not cheat. In contrast, at 2:1 and 4:1 excess WT starting ratios, <em>csgA</em> rods were more abundant than expected in early NFBs, indicative of cheating during mound formation. As NFBs matured, <em>csgA</em> and WT eventually formed spores with similar efficiency, although <em>csgA</em> began sporulation earlier and closer to the radial center. Our results reveal restrictions on cheating behavior, which may have selected C-signaling evolutionarily, and may explain the prevalence of short-range signaling in bacterial biofilm and multicellular animal development.</p>
Cross-continental comparison of parasite communities in a wide-ranging carnivore suggests associations with prey diversity and host density
<p><span>Parasites are integral to ecosystem functioning yet often overlooked. Improved understanding of host-parasite associations is important, particularly for wide-ranging species for which host range shifts and climate change could alter host-parasite interactions and their effects on ecosystem function. </span></p> <p><span>Among the most widely distributed mammals with diverse diets, grey wolves (<i>Canis lupus</i>) host parasites that are transmitted among canids and via prey species. Grey wolf-parasite associations may therefore influence the population dynamics and ecological functions of both wolves and their prey. Our goal was to identify large-scale processes that shape host-parasite interactions across populations, with the grey wolf as a model organism. </span></p> <p><span>By compiling data from various studies, we examined the faecal prevalence of gastrointestinal parasites in six wolf populations from two continents in relation to wolf density, diet diversity, and other ecological conditions.</span></p> <p><span>As expected, we found that the faecal prevalence of parasites transmitted directly to wolves via contact with other canids or their excreta was positively associated with wolf density. Contrary to our expectations, the faecal prevalence of parasites transmitted via prey was negatively associated with prey diversity. We also found that parasite communities reflected landscape characteristics and specific prey items available to wolves. </span></p> <p><span>Several parasite taxa identified in this study, including hookworms and coccidian protozoans, can cause morbidity and mortality in canids, especially in pups, or in combination with other stressors. The density-prevalence relationship for parasites with simple lifecycles may reflect a regulatory role of gastrointestinal parasites on wolf populations. Our result that faecal prevalence of parasites was lower in wolves with more diverse diets could provide insight into the mechanisms by which biodiversity may regulate disease. A diverse suite of predator-prey interactions could regulate the effects of parasitism on prey populations and mitigate the transmission of infectious agents, including zoonoses, spread via trophic interactions. </span></p>
Population expansion, divergence, and persistence in western fence lizards (Sceloporus occidentalis) at the northern extreme of their distributional range
<p>Population dynamics within species at the edge of their distributional range, including the formation of genetic structure during range expansion, are difficult to study when they have had limited time to evolve. Western Fence Lizards (<em>Sceloporus occidentalis</em>) have a patchy distribution at the northern edge of their range around the Puget Sound, Washington, where they almost exclusively occur on imperiled coastal habitats. The entire region was covered by Pleistocene glaciation as recently as 16,000 years ago, suggesting that populations must have colonized these habitats relatively recently. We tested for population differentiation across this landscape using genome-wide SNPs and morphological data. A time-calibrated species tree supports the hypothesis of a post-glacial establishment and subsequent population expansion into the region. Despite a strong signal for fine-scale population genetic structure across the Puget Sound with as many as 8–10 distinct subpopulations supported by the SNP data, there is minimal evidence for morphological differentiation at this same spatiotemporal scale. Historical demographic analyses suggest that populations expanded and diverged across the region as the Cordilleran Ice Sheet receded. Population isolation, lack of dispersal corridors, and strict habitat requirements are the key drivers of population divergence in this system. These same factors may prove detrimental to the future persistence of populations as they cope with increasing shoreline development associated with urbanization.</p>
Invasive widow spiders perform differently at low temperatures than conspecifics from the native range
<p>Temperature challenges are one of the leading abiotic causes of success or failure of non-native species in a novel environment, and this is particularly true for low temperatures. Establishing and reproducing in a novel thermal environment can alter survival, behaviour, and traits related to fitness. It has been proposed that plasticity or adaptation of thermal tolerance may allow an introduced species to thrive, or that successful invaders may be those with a thermal breadth in their native habitat that encompasses their new environment. Here, we tested these hypotheses using native and invasive populations of Australian redback spiders (Latrodectus hasselti). We measured how exposure to temperatures (exposure to 15°C and 25°C, respectively) common to invasive and native range habitats affected behavioural and life-history traits and tradeoffs that may underlie fitness in an invasive population detected in 1995 in Japan and a native population from Australia. We found that the critical thermal minimum (CTmin) was higher in the invasive population from Japan than in the native population, but critical thermal maximum (CTmax) did not differ between populations. Compared to the invasive population, eggs from the native population had a longer development time and lower hatching success at 15°C. Both populations performed equally well at 25 °C, as measured by egg development time and hatching success. Invasive juveniles that developed at 15 °C were slower to explore a novel environment and less bold when tested at 25 °C vs. 15 °C. In comparison, the native population showed faster average exploration, with no differences in response at the two development or testing temperatures. Overall, L. hasselti from Japan maintained hatching success and development across a wider temperature range than the native population, indicating greater thermal breadth and higher behavioural plasticity. These results support the importance of plasticity in thermal tolerance and behaviour for a successful invasion under novel environmental temperatures.</p>
Pearson correlation tests for environmental variables, Student t-test for range shift and comparisons for habitat loss in 2070
<p><span>Habitat loss and shifts associated with climate change threaten global biodiversity, with impacts likely to be most pronounced at high latitudes. With the disappearance of the tundra breeding habitats, migratory shorebirds that breed at these high latitudes are likely to be even more vulnerable to climate change than those in temperate regions. We examined this idea using new distributional information on two subspecies of Black-tailed Godwits <em>Limosa limosa</em> in Asia: the northerly, bog-breeding <em>L. l. bohaii</em> and the more southerly, steppe-breeding <em>L. l. melanuroides</em>. Based on breeding locations of tagged and molecularly assayed birds, we modelled the current breeding distributions of the two subspecies with species distribution models, tested those models for robustness, and then used them to predict climatically suitable breeding ranges in 2070 according to bioclimatic variables and different climate change scenarios. Our models were robust and showed that climate change is expected to push bohaii into the northern rim of the Eurasian continent. <em>Melanuroides</em> is also expected to shift northward, stopping in the Yablonovyy and </span><span>Stanovoy Ranges</span><span>, and breeding elevation is expected to increase.</span> <span>Climatically suitable breeding habitat ranges would shrink to 16% and 11% of the currently estimated ranges of <em>bohaii</em> and <em>melanuroides</em>, respectively. Overall, this study provides the first predictions for the future distributions of two little-known Black-tailed Godwit subspecies and highlights the importance of factoring in shifts in bird distribution when designing climate-proof conservation strategies.</span></p>
Community science data provides evidence for upward elevational range shifts by Eastern Himalayan birds
<p>The ongoing climate crisis is a significant threat to global biodiversity. As Earth warms, many species respond by shifting their geographical ranges either polewards, or in mountainous regions, upslope towards higher elevations, presumably to track suitable thermal environments. Upslope range shifts are of particular concern in tropical mountain ranges because: (a) tropical species are particularly thermally sensitive, (b) species moving upwards could become locally extirpated as they run out of habitable space, and (c) tropical mountains harbor a high fraction of Earth's terrestrial biodiversity. Rapid upslope shifts can therefore result in significant biodiversity losses. We used community science data over a 13-year period to evaluate whether 93 Eastern Himalayan bird species might be shifting to higher elevations. To do this, we analyzed changes in their occurrence probabilities in eBird checklists from birdwatching hotspots at fixed elevations. We found patterns consistent with upslope range shifts; species with elevational ranges primarily below hotspot elevations show increases in their occurrence probability over time, and those with most of their elevational ranges above a hotspot elevation decline in occurrence probability. Our findings are suggestive of rapid responses to climate change by Eastern Himalayan birds. We caution that Eastern Himalayan bird species might be at special risk from increasing global temperatures because of heightened thermal sensitivity coupled with high rates of warming in the region. To remain resilient in the face of climate change, Eastern Himalayan birds likely require undisturbed habitats spanning entire elevational gradients, to track rising temperatures by moving to higher elevations.</p>
data sets from "Updated trends of the stratospheric ozone vertical distribution in the 60S–60N latitude range based on the LOTUS regression model"
<p>Monthly means data sets from satellite, ground-based and model records used in the article entitled: "Updated trends of the stratospheric ozone vertical distribution in the 60 S–60 N latitude range based on the LOTUS regression model"</p> <p> </p>
Invasive plant species that experience lower herbivory pressure may evolve lower diversities of chemical defence compounds in the exotic range
<p><strong>ABSTRACT</strong></p> <p><strong>PREMISE</strong></p> <p>Invasive plant species often escape from specialist herbivore species and are likely to experience herbivory mostly from generalist herbivore species in the exotic range. Consequently, the Shifting Defence Hypothesis (SDH) predicts that invasive plants will express higher concentrations of qualitative defence compounds to deter dominant generalist herbivores in the exotic range. Here, I additionally propose a Reduced Chemical Diversity Hypothesis (RCDH), which predicts that reduced herbivory pressure will select for invasive plant genotypes that produce lower diversities of defence compounds in the exotic range.</p> <p><strong><span>METHODS</span></strong></p> <p>I tested whether: (1) Invasive <em>Brassica nigra</em> populations express a lower diversity and an overall higher concentration of glucosinolate compounds than native-range <em>B. nigra</em>; (2) <em>Brassica nigra</em> individuals that express high diversities and concentrations of glucosinolates are more attractive to specialist and deterrent to generalist herbivores; (3) Tissues of invasive <em>B. nigra </em>are less palatable to two generalist herbivores <em>Theba pisana</em> and <em>Helix aspersa</em> than tissues of native-range<em> B. nigra</em>.</p> <p><strong><span>RESULTS</span></strong></p> <p>Invasive <em>B. nigra </em>populations expressed a significantly lower diversity of glucosinolate compounds and a marginally higher concentration of total glucosinolate compounds. Leaf tissues of the invasive <em>B. nigra</em> were significantly less palatable to <em>T. pisana</em> and marginally less so to <em>H. aspersa</em>. <em>Brassica nigra</em> individuals that expressed high concentrations of total glucosinolate compounds were visited by a low diversity of generalist herbivore species in the field.</p> <p><strong><span>CONCLUSIONS</span></strong></p> <p>The biogeographical differences in glucosinolate profiles of invasive and native-range populations of <em>B. nigra</em> may be the result of differential herbivore selection pressures in the respective ranges.</p>
Survey of winter bird communities and vegetation in the Oregon Coast Range
<p>We re-surveyed forest bird communities during winter in seven large plots originally surveyed by graduate student, Stanley Anderson, from 1968 through 1970, near Corvallis, Oregon, USA. The forests in plots in the Coast Range Mountain foothills were and are currently dominated by Douglas-fir (Pseudotsuga menziesii). Anderson's thesis included plot locations, summaries of vegetation characteristics and point estimates of bird densities for each plot. Because of the lack of similar data, we re-surveyed his plots after aligning methods with his and added modern components (distance and time interval sampling) to facilitate comparisons of changes in abundances. We preserved more extensive metadata than were preserved from Anderson's surveys, including georeferenced point count survey locations to facilitate more precisely repeatable future re-surveys. We also measured vegetation characteristics to compare structural changes since Anderson's measurements.</p>
data sets from "Updated trends of the stratospheric ozone vertical distribution in the 60S–60N latitude range based on the LOTUS regression model"
<p>Monthly means data sets from satellite, ground-based and model records used in the article entitled: "Updated trends of the stratospheric ozone vertical distribution in the 60 S–60 N latitude range based on the LOTUS regression model".</p> <p>Information about and the most recent versions of each dataset can be found at their individual source locations:</p> <p>Merged satellite datasets</p> <ol> <li>SBUV MOD – https://acd-ext.gsfc.nasa.gov/Data_services/merged/index.html (NASA GSFC, USA)</li> <li>SBUV COH: https://ftp.cpc.ncep.noaa.gov/SBUV_CDR/ (NOAA, USA).</li> <li>GOZCARDS: https://www.earthdata.nasa.gov/esds/competitive-programs/measures/gozcards (JPL, NASA, USA)</li> <li>SWOOSH: https://csl.noaa.gov/groups/csl8/swoosh/ (NOAA, USA).</li> <li>SAGE-CCI-OMPS and MEGRIDOP datasets are available through https://climate.esa.int/en/projects/ozone/data/ and ftp://cci_web@ftp-ae.oma.be/esacci (ESA Climate Office). They are provided by FMI, Finland</li> <li>SAGE-SCIAMACHY-OMPS: data record is available upon registration via the following link: http://www.iup.uni-bremen.de/DataRequest/ (U. Bremen, Germany).</li> <li>SAGE-OSIRIS-OMPS: downloading instructions can be found at https://research-groups.usask.ca/osiris/data-products.php#OSIRISLevel3andMergedDataProducts (U. Saskatchewan, Canada).</li> </ol> <p>Ground-based records:</p> <ol> <li>Umkehr – https://gml.noaa.gov/aftp/data/ozwv/Dobson/AC4/Umkehr/Monthly/ (NOAA, USA)</li> <li>ozonesondes – https://hegiftom.meteo.be/datasets/ozonesondes (HEGIFTOM). Measurements at the various stations are provided by the following institutions: <ul> <li>Hohenpeissenberg: DWD, Germany</li> <li>Payerne:MeteoSwiss, Switzerland</li> <li>OHP, CNRS, France</li> <li>Hilo, NOAA, USA</li> <li>Lauder, NIWA, New Zealand</li> </ul> </li> <li>lidar: <a href="http://www.ndacc.org/">http://www.ndacc.org/</a> . Measurement at the various stations are provided by the following institutions: <ul> <li>Hohenpeissenberg: DWD, Germany</li> <li>OHP: CNRS, France</li> <li>MLO: JPL, NASA, USA</li> <li>Lauder: NIWA, New Zealand</li> </ul> </li> <li>FTIR spectrometers – <a href="http://www.ndacc.org/">http://www.ndacc.org/</a> Three sites only provided quality checked measurements relevant for the article. For other ozone FTIR measurements, data in <a href="http://www.ndacc.org/">http://www.ndacc.org/</a> must be used. Measurement used in the article are provided by the following institutions: <ul> <li>Zugspitze: KIT, Germany</li> <li>Jungfraujoch: ULiège, GIRPAS team, Belgium</li> <li>Lauder: NIWA, New Zealand</li> </ul> </li> <li>Microwave spectrometers: <a href="http://www.ndacc.org/">http://www.ndacc.org/</a> Measurement at the various stations are provided by the following institutions: <ul> <li>Payerne: MeteoSwiss, Switzerland</li> <li>Mauna Loa: NRL, USA</li> <li>Lauder: NRL, USA</li> </ul> </li> </ol> <p>Chemistry Climate Model (CCM) CCMI simulations are avilable at https://blogs.reading.ac.uk/ccmi</p>
Population dynamics of Amazonian floodplain forest species support spatial variation on genetic diversity but not range expansions through time
<p><strong>Aim: </strong>We tested if historical demographic changes of populations occurring on the floodplains of a major Amazon Basin tributary could be associated with range expansions from upper and middle sections of the river, following the establishment of widespread river-created environments during the Late Pleistocene and Holocene.</p> <p><strong>Location: </strong>Solimões River, Western Amazon, South America.</p> <p><strong>Taxon: </strong><em>Myrmoborus lugubris</em>, <em>Thamnophilus cryptoleucus</em> and <em>Myrmotherula assimilis</em>.</p> <p><strong>Methods:</strong> We explored spatial patterns of genetic diversity and connectivity among sampled localities using thousands of Ultra-Conserved Elements. Range expansions were tested with alternative methods. We quantified habitat preference for the analyzed species to test whether the occupation of dynamic habitats could predict spatial patterns of genetic diversity.</p> <p><strong>Results: </strong>Our study did not support shared population range expansions related to historical regionalized changes in habitat availability. We found considerable variation in the spatial distribution of the genetic diversity between studied taxa, and that species with higher levels of specialization to dynamic environments have a more heterogeneous distribution of genetic diversity and reduced levels of gene flow across space.</p> <p><strong>Main conclusions:</strong> Our results suggest that demographic expansions along the Solimões River might be linked to spatially homogeneous oscillation in the distribution of floodplain environments, promoting effective population size changes but not range expansion. We found that habitat specificity might be a good predictor of population connectivity along the Amazonian floodplains.</p>
Data from: Paleoclimatic changes resulted in range expansion and subsequent divergence in brown fur seals, Arctocephalus pusillus
<p class="MsoNormal"><span>Past climatic change as a driving force of marine diversification is still largely unclear, particularly for Southern Hemisphere species. Here, we present a case study using the brown fur seal, <em>Arctocephalus pusillus,</em> and assess the geographical structure and demographic history using mitochondrial and nuclear data. Results show the two previously defined subspecies (one from Australia and the other from Southern Africa) are phylogeographically distinct. Migration analyses based on nuclear data suggest the absence of migrants among the two genetically close assemblages. The demographic history of <em>A. pusillus</em> is characterized by a glacial population expansion (~18 Kya) in the Southern African taxon, which coincides with time estimates of population expansion of prey species of seals. Approximate Bayesian Calculations support an eastward dispersal event during the Last Glacial Maximum (LGM) when sea levels were lower, followed by a postglacial divergence event, ~ 13 Kya. The demographic history of the brown fur seal in the Southern Oceans provides support that recent paleoclimatic changes could have facilitated expansions in some marine species and that postglacial sea-level rise may have acted as a dispersal barrier for species mostly confined to continental shelves. </span></p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.