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8,537 results for “Openness”
Le Journal of Open Humanities Data (JOHD) : enjeux et défis dans la publication de data papers pour les sciences humaines et sociales (SHS)
<p>This repository hosts the pre-print version of the paper and the data used for the following publication:</p> <p>Marongiu, Paola; Pedrazzini, Nilo; Ribary, Marton; McGillivray, Barbara (forthcoming). "<strong>Le <em>Journal of Open Humanities Data</em> (<em>JOHD</em>) : enjeux et défis dans la publication de <em>data papers</em> pour les sciences humaines et sociales (SHS)</strong>". In Schopfel, Joachim and Kosmopoulos, Christine (eds.) Publier, partager, réutiliser les données de la recherche: les data papers et leurs enjeux. Lille: Presses Universitaires du Septentrion.</p> <p>The file "johd_publications.xlsx" contains the data used for the section "Publier des<em> data papers</em> pour les SHS : l’expérience du<em> JOHD</em>". This includes all relevant information about the papers published by the Journal of Open Humanities data. The title of the published paper; the DOI; the date of publication; the special collection in which the paper was published (if any); the keywords associated with the paper; the names of the authors.</p> <p>The zip folder "datapapers_catalyseurs.zip" contains the data used for the section "Les <em>data papers</em> : des catalyseurs de la réutilisation des données ?". This includes information about the papers published by the Journal of Open Humanities data and their corresponding datasets (downloads, views, tweets, citations and Altmetric).</p>
Video for "Outlining of the Open Digital Twin Platform"
<p>Complex simulations and machine-learning models increase in application in research, industry, and governance. However, applying these systems with reasonable accuracy and efficiency requires large-scale efforts of data collection, data transformation, data analysis, and data visualization. At the same time, maintaining the required infrastructure, software, and personnel skyrockets making these tools unavailable to many potential users. The paradigm of the digital twin offers a novel perspective on how to manage the data efficiently and make these systems available more steadily at a lower cost. We introduce the first prototype of the Open Digital Twin Platform (ODTP) that is designed to be openly available to all interested parties to enable a common framework and baseline for digital twin based research. ODTP uses containerization, loose coupling, and micro-services to provide dynamically composable digital twins.<br> ODTP also provides tools for licensing resolution, privacy and access control, and reproducibility. In its first iteration presented here, ODTP implements a common mobility research pipeline of the eqasim pipeline for MATSim. These kind of programs are usually difficult to assemble and use, thus leading to dangerous versions of ``never change a running system''. ODTP converts them into an easy-to-use version making it possible to initiate mobility simulations with one click. ODTP enables the quick adding of relevant data sources and analytical pipelines related to any topic and make them easily usable, accessible and shareable to research, industry, and governance. Thus, ODTP expands the FAIR principle from data to the complete data life cycle.</p>
Passive Open-Path Fouriertransform Infrared spectroscopy (OP-FTIR) measurements in the Arctic environment of Ny Ålesund / Svalbard 2023
<p>In the Polar MOSES campaign 2023, a ground-based remote sensing method – OP-FTIR spectroscopy- which is proven to be a flexible long-path technique for the characterization of larger areas was used. This method is able to simultaneously detect various volatile atmospheric compounds relevant for environmental assessment with a single rapid measurement. Many greenhouse gas molecules (e.g., CO<sub>2</sub>, H<sub>2</sub>O, CH<sub>4</sub>) have unique signatures (absorption or emission bands) in the measured spectral IR range. IR spectroscopy allows spatial and non-invasive characterization of emissions and is a useful method to capture emissions along the coastline, both seaward and landward.</p> <p>The passive technique was applied in a mobile mode to obtain IR spectra at different relevant locations. In order to investigate the near surface atmospheric composition, the mobile passive OP-FTIR spectroscopic scanning measurements was executed with Bruker RAPID devices to cover marine and terrestrial areas. The RAPID passive detection systems was deployed for 360° remote sensing of threats at distances up to 5000 m. Initially, the survey's primary objective was to qualitatively interpret spectra, enabling the identification of emission sources and the characterization of the heterogeneous emission pattern. This was achieved through the measurements in different directions to allow the direct comparisons of the various compartments under investigation and their potential interactions.</p>
Data from: Scoring thermal limits in small insects using open-source, computer assisted motion detection
<p>Scoring large amounts of thermal tolerance traits live or with recorded video can be time consuming and susceptible to investigator bias, and as with many physiological measurements, there can be trade-offs between accuracy and throughput. Recent studies show that particle tracking is a viable alternative to manually scoring videos, although it may not detect subtle movements, and many of the software options are proprietary and costly. In this study, we present a novel strategy for automated scoring of thermal tolerance videos by inferring motor activity with motion detection using an open-source Python command line application called DIME (Detector of Insect Motion Endpoint). We apply our strategy to both dynamic and static thermal tolerance assays, and our results indicate that DIME can accurately measure thermal acclimation responses, generally agrees with visual estimates of thermal limits, and can significantly increase the throughput over manual methods.</p>
The role of glaciations in the evolutionary history of a widely distributed Neotropical open habitat bird
<p><strong>Aim: </strong>The Neotropics constitute the most biodiverse region of the world, yet its patterns of diversification and speciation differ among Neotropical areas and are not equally well understood. Particularly, avian evolutionary processes are understudied in the open habitats of temperate South America, where the role of glacial cycles is not clear. We analyzed the evolutionary history of a Neotropical widespread bird species as a case study to evaluate its continental-scale patterns and processes of diversification, with a focus on Patagonia.</p> <p><strong>Location: </strong>Open habitats of the Neotropics.</p> <p><strong>Taxon:</strong> <em>Vanellus chilensis</em> (Aves, Charadriiformes).</p> <p><strong>Methods: </strong>We obtained reduced representation genomic and mitochondrial data from the four subspecies of <em>V. chilensis</em> to perform a phylogenetic/phylogeographic analysis and study the evolutionary history of the species. We complemented these analyses with the study of vocalizations, a reproductive signal in birds.</p> <p><strong>Results:</strong> The initial diversification event within <em>V. chilensis</em>, approximately 600,000 years ago, split a Patagonian lineage from one containing individuals from the rest of the Neotropics. We found considerable gene flow between these two lineages and a contact zone in northern Patagonia and showed that genomic admixture extends to northwestern Argentina. Shallower divergence was detected between the two non-Patagonian subspecies, which are separated by the Amazon River. Vocalizations were significantly different between the two main lineages and were intermediate in their temporal and frequency characteristics in the contact zone.</p> <p><strong>Main conclusions: </strong>Patagonian populations of <em>V. chilensis</em> are clearly differentiated from those of the rest of the Neotropics, possibly as a consequence of Pleistocene glaciations. A secondary contact zone in northern Patagonia with extensive gene flow among lineages appears to be the consequence of post-glacial, northward expansion of the Patagonian populations. Future analyses focused on the dynamics of the contact zone will allow us to establish whether the species continues to diverge or is homogenizing. </p>
Free Open Source Communities Sustainability: Does It Make a Difference in Software Quality?
<p> Free and Open Source Software (FOSS) communities' sustainability is important to maintain and promote access to technology and innovation. While considerable effort has been invested on the topic of FOSS sustainability, limited attention has been given to its impact on community outcomes, e.g., software quality. We conducted an empirical study to examine the influence of FOSS sustainability on software quality. We used projects' data sourced from the Apache Software Foundation Incubator. A total of 236 projects were originally selected. Our final list included a total of 217 projects after applying our exclusion criteria. We used Bayesian data analysis, which incorporates probability distributions to represent the regression coefficients and intercepts. Our findings suggest that our selected sustainability metrics do not significantly affect defect density or code coverage. However, we observed a positive impact of community age on specific code quality metrics, such as risk complexity, number of very large files, and code duplication percentage. Interestingly, our findings show that even when communities are experiencing sustainability, certain code quality metrics are negatively impacted. This implies that code quality practices are not consistently linked to sustainability, and defect management and prevention may be prioritized over the former.</p>
ODSS: An Open Dataset of Synthetic Speech
<p>ODSS is a multilingual, multispeaker dataset of synthetic and natural speech, designed to foster research and benchmarking of novel studies on synthetic speech detection. </p> <p>ODSS comprises audio utterances generated from text by state-of-the-art synthesis methods, paired with their corresponding natural counterparts. The synthetic audio data includes several languages, with an equal representation of genders.</p> <p>Natural and synthetic speech audio files within ODSS are released under the CC-BY-SA 4.0 license: Usage, extension and redistribution by the research community are strongly encouraged.</p>
List of PRECINCT Open Source Tools and Assets
<p>This is a list of open source tools developed by the PRECINCT project for stakeholders to engage with.</p>
Data on publication volumes for selected open access journals and platforms
<p>This dataset accompanies the report 'Scenario Modelling for Open Research Europe', prepared for the European Commission's Directorate-General for Research and Innovation by Rob Johnson of Research Consulting, acting in the capacity of an independent expert. The data was extracted from www.lens.org in May 2023 to asset historic patterns of publication growth for a sample of open access journals and platforms.</p>
Transit agencies want open payments but there are challenges
<p>This study explores interest in, and the challenges faced by transit agencies and operators in the adoption of open-loop payment systems. The research team focuses in particular on the ways that agencies view passenger needs in the context of adopting open payments. Challenges with cash payments, an increasingly cashless society, and the expanding offerings of digital payment options have spurred increased interest in open-loop payments among transit operators. Paying for transit with cash can require additional time at boarding, add extra steps for passengers who must pay with exact fare, and result in service inefficiencies. It presents security concerns for drivers, and administrative burdens for agencies. While the full costs of cash handling vary per agency the cost of handling and moving cash may be considerable. Pioneering transit agencies are adopting open payment systems that accept credit cards, debit cards, and smartphone/watch-based transactions. However, there is a huge diversity among transit agencies and as such, agencies face different challenges and to different degrees, when considering the adoption of open payment systems. Challenges can include financial barriers, capacity limitations, technological challenges, the duration of existing contracts, competing needs, and a number of passenger challenges such as lack of credit cards or smartphones. This study uses data collected from California transit agencies in the fall of 2022 that gathered information about agency perceptions of open-loop payments and the challenges with adopting open fare collection systems, and whether assistance programs would benefit transit agencies interested in adopting open-loop payments. Even before the pandemic prompted agencies to consider open and contactless payments, many agencies were exploring this option. Results of the present study indicate that the majority of agencies are considering or have considered implementing open payment systems, but agencies are not fully aware of the assistance available from the California Integrated Travel Program to help in the transition to digital and open payment systems. Key challenges include the cost, as well as the technical needs to implement open payments. Agencies also cited passenger familiarity with technology and ability to have a bank account as potential hurdles. This study sheds light on the challenges facing small to medium transit agencies in the transition of California's transit systems to open-loop payment systems.</p>
Towards a general open dataset and model for late medieval Castilian text recognition (HTR/OCR). Datasets and scripts
<p>This repository contains the dataset of the article "Towards a general open dataset and models for late medieval Castilian writing (HTR/OCR)" submitted to the Journal of Data Mining and Digital Humanities (JDMDH). I refer to the paper (<a href="https://doi.org/10.5281/zenodo.7387376">https://doi.org/10.5281/zenodo.7387376</a>) for the description of the corpus and the models.</p><p><strong>The dataset is in version V2: it contains the allographetic AND graphematic transcriptions (files `*.normalized.xml`) and models.</strong></p><p><i>Caveat</i>: the allographetic transcriptions and models only are described in the data paper mentionned above. The graphematic transcriptions are produced using a Chocomuffin conversion table (see `corpus/conversion_table.csv`) to reduce each allograph to its corresponding grapheme. The abbreviations are not expanded.</p><p>Please cite the following paper if you use this dataset or the models:</p><p>@article{gille_levenson_2023_towards,<br> author = {Gille Levenson, Matthias},<br> date = {2023},<br> journaltitle = {Journal of Data Mining and Digital Humanities},<br> doi = {<a href="https://doi.org/10.46298/jdmdh.10416">10.46298/jdmdh.10416</a>},<br> editor = {Pinche, Ariane and Stokes, Peter},<br> issuetitle = {Special Issue: Historical documents and automatic text recognition},<br> title = {Towards a general open dataset and models for late medieval Castilian text recognition<br>(HTR/OCR)},</p><p>GILLE LEVENSON , Matthias, « Towards a general open dataset and models for late medieval Castilian<br>text recognition (HTR/OCR) », <i>Journal of Data Mining and Digital Humanities</i> (2023) : Special<br>Issue : Historical documents and automatic text recognition, eds. Ariane PINCHE and Peter<br>STOKES, DOI : <a href="https://doi.org/10.46298/jdmdh.10416">10.46298/jdmdh.10416</a>.</p><p>The image of the manuscript M (Esc_M) has not yet been uploaded, pending permission from the library that keeps the manuscript.</p><p>All images are kept in a directory named after the place where the manuscript is kept, and the sigla of the witness for the in-domain dataset.</p><p> </p><p>The global licence for the dataset (except for images) is CC-BY-NC-SA.</p><p>All manuscripts reproductions are published with the authorization of the libraries.</p><p><strong>©Biblioteca General Histórica de Salamanca</strong></p><p>Universidad de Salamanca (España), Biblioteca General Histórica, Ms. 2709 (L)</p><p>Universidad de Salamanca (España), Biblioteca General Histórica, Ms. 2097 (J)</p><p>Universidad de Salamanca (España), Biblioteca General Histórica, Ms. 2673</p><p>Universidad de Salamanca (España), Biblioteca General Histórica, Ms. 2011</p><p>Universidad de Salamanca (España), Biblioteca General Histórica, Ms. 2654</p><p>Universidad de Salamanca (España), Biblioteca General Histórica, Ms. 2086</p><p><strong>©Museo Lázaro Galdiano. Madrid</strong></p><p>Inv. 15304, Fundación Lázaro Galdiano (A)</p><p><strong>©Universidad de Valladolid</strong></p><p>Ms. 251, Biblioteca Santa Cruz (S)</p><p><strong>©Real Biblioteca del Escorial</strong></p><p>Ms. K.I.5, Biblioteca del Real Monasterio del Escorial (Q)</p><p>Ms. h.I.8, Biblioteca del Real Monasterio del Escorial (M): to be published</p><p>Ms. Z-I-12</p><p>Ms.Z-III-9</p><p>Ms. X-III-4</p><p>Ms. h-III-9</p><p>Ms. b-IV-15</p><p>Ms. b-II-11</p><p>Ms. a-II-17</p><p>Ms. T-III-5</p><p><strong>©Rosenbach Foundation</strong></p><p>Ms. 482/2 (U)</p><p><strong>© Gallica.bnf.fr</strong></p><p>Espagnol 12</p><p>Espagnol 36</p><p>Espagnol 218</p><p><strong>© Bodleian Library</strong></p><p>Ms. Span. d. 1</p><p>Ms. Span. d. 2/1</p><p><strong>© Biblioteca Real, Madrid</strong></p><p>Ms. II/215 (G)</p><p><strong>© Biblioteca Nacional de España</strong></p><p>Mss/4183</p><p>Inc/901 (Z)</p><p><strong>© Biblioteca Universitaria, Sevilla</strong></p><p>Ms. 332/131 (R)</p><p> </p><p>Edit: add result files</p>
Survey to help identify whether Octopus might help researchers produce high quality, open research
<h2>Survey to help identify whether Octopus might help researchers produce high quality, open research</h2><p>In order to complement in-depth, but necessarily small sample size, interviews, an online survey allowed us to reach a broader population to gain some quantitative data on the current research culture and barriers to best practice, as well as whether the Octopus platform might help overcome them.</p><p>The finalised survey was implemented on EUSurvey. It is a fully open source online survey platform developed and administered by the European Commission, adhering to relevant privacy regulations (e.g. the General Data Protection Regulation (GDPR)).</p><p>The survey was open from 17 January to 5 February 2023.</p><p>Details on the implementation of this survey is published on Octopus.</p>
Open Source Software Package, Version and Dependency Metadata
<p>This dataset contains metadata about 7 million open source packages, versions and dependencies from 34 different software ecosystems in 4 different csv files exported from <a href="https://packages.ecosyste.ms/">https://packages.ecosyste.ms</a>. This can be seen as a spiritual successor to https://zenodo.org/records/3626071, up to date for 2023, including more packages and an expanded array of metadata fields.</p><p>Full copies of the postgresql database this data was extracted from are also available: <a href="https://packages.ecosyste.ms/open-data">https://packages.ecosyste.ms/open-data</a> </p><h4>Files</h4><p>Expanded csv sizes:</p><ul><li>packages-1.0.0-2023-10-17.csv - 2.6GB - 7,015,326 rows</li><li>packages_with_repository_fields-1.0.0-2023-10-17.csv - 4.3GB - 7,019,492 rows</li><li>versions-1.0.0-2023-10-17.csv - 14GB - 84,953,382 rows</li><li>dependencies2-1.0.0-2023-10-17.csv - 124GB - 976,944,543 rows</li></ul><p>Contact</p><p>If you would like any help, support or more data from Ecosyste.ms please do get in touch via email: hello@ecosyste.ms or open an issue on GitHub: <a href="https://github.com/ecosyste-ms/packages/issues">https://github.com/ecosyste-ms/packages/issues</a></p>
1820 Open Scorper
Modeled from Eric Sloane's [*Museum of Early American Tools*](https://www.amazon.com/Museum-Early-American-Tools-Americana/dp/0486425606/ref=sr_1_1?crid=1MDB8783EQVPS&dchild=1&keywords=museum+of+early+american+tools&qid=1613590281&s=books&sprefix=museum+of+early%2Cstripbooks%2C170&sr=1-1). Textured with [CC0 Textures](https://cc0textures.com) assets. Made with [Blender](https://blender.org). Source: Objaverse 1.0 / Sketchfab
Rexo Camera - open
From the collections of the Santa Cruz Museum of Art and History. This is the same camera as in the [Rexo Camera - closed](https://sketchfab.com/models/048c28439c4d4c14981aae5f62d398f6). Source: Objaverse 1.0 / Sketchfab
Colorbond Fence, Open
Based off the 'Woodland Grey' colour. Dimensions accurate. Exported from Rhino 7. Designed to be strung together Source: Objaverse 1.0 / Sketchfab
Mobiliscope, an open platform to explore cities and social mix around the clock. www.mobiliscope.cnrs.fr
<p>Cities are not the same at night and during the day : people move daily and make changes in neighbourhoods densities and their social structures. <strong>Mobiliscope</strong> is a free and open-source web mapping platform to explore how cities, neighborhoods and social segregation change over a 24 hours period.</p> <p>58 city regions are included in this version (<strong>v4.3</strong>) of the Mobiliscope : 49 French cities, 6 Canadian cities and 3 Latin American cities.</p> <p><a href="https://mobiliscope.cnrs.fr/">https://mobiliscope.cnrs.fr/</a></p> <p>Data are <strong>made available under the Open Database License - ODbL</strong>. Users are free to use and adapt these data as long as they redistribute a version of their adapted database under the ODbL licence and that they attribute the original sources as indicated in the pdf files.</p>
Multiplier Event 7 (E7) : Citizen Science for Librarians: open access resources from a teaching/learning perspective
<p>Event: Piliečių mokslas bibliotekininkams: atvirosios prieigos ištekliai mokymo(si) perspektyvoje (Citizen Science for Librarians: open access resources from a<br>teaching/learning perspective)<br>Date: 24.05.2024<br>Language: Lithuanian<br>Target group: Lithuanian academic and public library staff</p> <p>LIBOCS Multiplier Event number 7 </p> <p>Objectives of the event:<br>1. present the open access collection of resources on citizen science (PR6A1)<br>2. to present Citizen Science toolkit for Librarians (PR6A2) and its potential or use in<br>teaching and learning<br>3. to demonstrate all the project results on Zenodo platform</p> <p><strong>Project acronym</strong>: LibOCS<br><strong>Full project title</strong>: University libraries strengthening the academia-society connection through citizen science in the Baltics</p> <p>This project is funded under the Erasmus+ KA2 Strategic Partnerships program. Project Number: 2021-1-EE01-KA220-HED-000031125</p>
Dual structure of a vanadyl-based molecular qubit containing a bis(β-diketonato) ligand. Open dataset
<p>Data supporting the original figures 2, 4, 6, and 7 of the related publication</p>
A Phase 3B, Open-label, Single-arm Study of the Efficacy and Safety of Apremilast, in Subjects With Plaque Psoriasis That is Not Adequately Controlled by Topical Therapy
ClinicalTrials.gov study NCT03930186. IPD Sharing: YES. Countries: 2. Publications: 2.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.