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6,704 results for “reports”
Basaloid Squamous Cell Carcinoma: A Case Report
<p><strong>Background:</strong> The upper aerodigestive tract is where BSCC (basaloid squamous cell carcinoma), a rare variation of conventional SCC, is most frequently found. The hypopharynx, tonsil, supraglottic larynx, tongue (base), and head-neck regions are particularly susceptible to BSCC. Clinically, the presentation of BSCC is similar to that of conventional SCC, but it has a poor prognosis than traditional SCC. BSCC is distinguished histopathologically by a dimorphic-pattern, a distinctive basal cell component paired with a squamous component, and a squamous component. Compared to traditional SCC, the prognosis for BSCC is worse. However, clinically it shows similar features like conventional SCC which makes it difficult to diagnose. Therefore, histopathology and immunohistochemistry have a crucial role in diagnosing such tumors. We here present a case of a seventy-year male diagnosed with BSCC involving the tongue.</p> <p><strong>Keywords</strong>: Basaloid squamous cell carcinoma, dimorphic pattern, basaloid cells, comedo necrosis.</p>
Preferred Reporting Items for Systematic reviews and Meta-Analyses extension for Scoping Reviews (PRISMA-ScR) Checklist
<p>Preferred Reporting Items for Systematic reviews and Meta-Analyses extension for Scoping Reviews (PRISMA-ScR) Checklist </p>
Input data for the case study reported in "DREAM: an R package for druggability evaluation of human complex diseases".
<p>The data included in this record constituted the input for the case study reported in the manuscript "DREAM: an R package for druggability evaluation of human complex diseases", by Antonio Federico, Michele Fratello, Alisa Pavel, Lena Möbus, Giusy del Giudice, Angela Serra, Dario Greco. The data derive from transcriptomics experiments executed on lesional skin from atopic dermatitis patients and unaffected skin counterparts. The data consists of two files in ".txt" format reporting gene expression data in tabular format, where on the rows are reported genes and on the columns are reported samples. The data is an aggregated and batch-corrected collection of datasets originally downloaded by Gene Expression Omnibus (GEO, https://www.ncbi.nlm.nih.gov/geo/). The file "GE_Mic_AD_Pamr_MAARS.txt" reports gene expression estimates of lesional skin of atopic dermatitis patients, while the file "GE_Mic_AD_Pamr_nl_MAARS.txt" reports gene expression estimates of non-lesional skin of atopic dermatitis patients.</p>
Growing Arabidopsis pollen tubes expressing genetically encoded reporters for calcium and pH
<p>Spatiotemporal dynamics of intracellular pH (H+) and calcium (Ca2+) in growing Arabidopsis pollen tubes. Fluorescence time-lapses of pollen tubes expressing ratiometric sensors under the pollen-specific LAT52 promoter, namely CaMeleon (Ca2+) [Damineli et al., 2017; DOI: 10.1093/jxb/erx032] and pHluorin (pH) [Hoffmann et al., 2020; DOI: 10.1038/s41467-020-16253-1], were acquired every 4 seconds with an inverted microscope equipped with a front-illuminated camera (2560 × 2160, pixel size 6.45 μm), a fluorescence illuminator, and a ×63 1.2NA water immersion objective lens. The CaMeleon filters were set as follows: excitation 426-450 nm (CFP) and 505-515 nm (YFP), emission 458-487 nm (CFP) and 520-550 nm (YFP). As for pHluorin, the filter settings were: excitation 318-390 nm (DAPI) and 428-475 nm (FITC), emission 435-448 nm (DAPI) and 523-536 nm (FITC) [from Damineli et al., 2017; Hoffmann et al., 2020].</p>
IODP Expedition 369 Carbonates composite report
<p>This composite report includes data from two analyses (total carbon from Elemental analysis [CHNS], and inorganic carbon from [Coulometer]). Each row combines the CHNS and Coulometer data from measurements made on the same sample at the same time for a particular section and section offset (depth). If data do not exist for a particular expedition, the column does not appear. To identify individual samples and tests, see each separate data type (Elemental analysis and Coulometer). If the same sample was measured multiple times by any of the methods, results in the report will be combined on one line where possible. Each additional replicate result will be shown in subsequent rows and will be combined where possible. Report includes results for carbon forms: total, inorganic, calcium carbonate, and organic by difference, along with total hydrogen, nitrogen, and sulfur.</p>
IODP Expedition 369 Gas safety report
<p>This composite report returns data from two different gas chromatograph configurations (GC3 and NGA). Each row combines data from several measurements made on the same sample at the same time for a particular headspace or vacutainer sample. If data do not exist for a particular expedition, the column does not appear. Gas samples were measured by gas chromatography and either flame ionization detection (GC-FID) or thermal conductivity detection (GC-TCD). Reported analytes may include methane, ethane, ethene, propane, propene, n-butane, i-butane, n-pentane, i-pentane, n-hexane, i-hexane, n-heptane, i-heptane, nitrogen, oxygen, carbon monoxide, carbon dioxide, and hydrogen sulfide. When data are available, methane to (ethane + ethene) ratio (C<sub>1</sub>/C<sub>2</sub>�ratio) is reported. To identify individual samples and tests, see each separate analysis (GC3, NGAFID, and/or NGATCD).</p>
Figures 1–4 in A preliminary report on non-insect arthropods (Arachnida, Diplopoda) at Fakahatchee Strand Preserve State Park
Figures 1–4. Photos of traps used. 1) PVC pitfall trap structure. 2) PVC pitfall trap buried with top flush with ground surface. 3) Paired PVC pitfall traps in situ without roof. 4) Paired PVC pitfall traps in situ each with wooden roof (black arrows).
IODP Expedition 369 Sample report
<p>Report includes detailed information about samples taken for testing: location/depth, type/form factor, test, request number, and database identifier.</p>
IODP Expedition 369 Interstitial water composite report
<p>This composite report includes data from numerous interstitial water (IW) analyses (e.g., ICP-LIQUIDS and IONCHROM) in a variable set of columns. Each row combines the data from several tests (groups of measurements made on the same sample at the same time) for a particular IW sample. If data do not exist for a particular expedition, the column does not appear. To identify individual samples and tests, see each separate analysis (ALKALINITY, ICP-LIQUIDS, IONCHROM, SALINITY, SPEC, TITRATOR, and potentially others). Major and minor elements were determined by inductively coupled plasma-atomic emission spectrocsopy (ICP-LIQUIDS). Cations and anions were measured by ion chromatography (IONCHROM). Complex ions were measured by colorimetric measurements using a UV-VIS spectrometer (SPEC). Alkalinity and chloride was measured by titration (ALKALINITY and TITRATOR). Dissolved carbon (DC), dissolved inorganic carbon (DIC), and dissolved organic carbon (DOC) were measured by combustion in a total organic carbon (TOC) analyzer. Salinity was measured by refractometer (SALINITY). pH was measured by ion-selective electrode as part of the alkalinity procedure and is reported in the ALKALINITY analysis.</p>
Data files for manuscript "Re-evaluation and Re-analysis of 152 research exomes five years after the initial report reveals clinically relevant changes in 18%"
<p>#2023-06-16<br> #Summary<br> This ZIP-file contains the data files used for all analyses for the manuscript "Re-evaluation and Re-analysis of 152 research exomes five years after the initial report reveals clinically relevant changes in 18%".</p> <p><br> #File structure<br> README.txt This README file.<br> File S02 ("FileS2_conNDD-cohort.xlsx") All variants identified by Reuter et al. previously with reevaluated variants and addition variants identified in this <br> project togetehr with information about the families, individuals, samplesand the BAM files assessed in this project.<br> File S03 ("FileS3_conNDD-variants.xlsx") All variant data analyzed from the cohort. Including a sheet with thresholdes for in silico predictions tools used to predict effect of variants, <br> a table with exome wide homozygous variants in 4 categories (A45, LGD, Missense, Splice), a table with exome wide variants in 4 categories (A45, LGD, Missense, Splice)<br> filtered for domiant genes associated with neurodevelopmental disorders in SysID (Prime and Candidate list), a table with exome wide variants in 4 categories (A45, LGD, Missense, Splice) filtered for recessive genes associated with neurodevelopmental disorders in SysID (Prime and Candidate list), a table withcopy number (CN) calls for the cohort and a table withcalls for runs of homozygosity (RoH) regions.</p> <p>#Files and checksums<br> 29c4b2f3dd8985d268f50dd3e0265798 ./FileS2_conNDD-cohort.xlsx<br> a054334637b8b22a9bf743db1e348663 ./FileS3_conNDD-variants.xlsx<br> </p>
Renewable Generation Profiles and Weather Correlated Loads Used in CEC EPC-19-056 Final Report
<p>This repository contains 8760 hour time series data for load and renewable generation utilized in the <br> CEC EPC-19-056 Final Report: Assessing the Value of LDES in California. The details of how these profiles were constructed can be found in Appendix B of the report.</p> <p>The load balancing authorities and renewable resources modeled in this study are consistent with those found in the 2019-20 CPUC IRP Inputs and Assumptions, which can be found here: https://www.cpuc.ca.gov/-/media/cpuc-website/divisions/energy-division/documents/integrated-resource-plan-and-long-term-procurement-plan-irp-ltpp/2019-2020-irp-events-and-materials/inputs--assumptions-2019-2020-cpuc-irp_20191106.pdf</p>
Fig. 1 in Bait traps remain attractive to euglossine bees even after two weeks: a report from Brazilian Atlantic forest
Fig. 1. Variation in the number of individuals and species collected in RNV according to the attractive bait and each performed sample. a: abundance of specimens collected per day in each sample; b: absolute number of specimens collected in each sample; c: accumulated number of species after samples (a–c: sample 1, black; sample 2, gray; sample 3, white; BA: benzyl acetate; BI: β-ionone; EC: eucalyptol; EG: eugenol; MC: methyl trans-cinnamate; MS: methyl salicylate; VN: vanillin; T: total per sample); d: relative abundance of specimens collected in each scent (EC, black; EG, dark gray; VN, gray; BI, light gray; BA+MC+MS: white; numbers refer sequentially to first, second and third collections).
Figures 1–4 in First report of regeneration in the genus Mesobuthus (Scorpiones: Buthidae)
Figures 1–4: Mesobuthus mesopotamicus (Penther, 1912). FIgures 1–2. Dorsal (1) and ventral (2) views. FIgures 3–4. Normal right leg II (3), Left leg II with regeneration (4). Scale bar: 10 mm (1–2), 1 mm (3–4). Abbreviations: mt=metatarsus, pa=patella, pt=pretarsus, ti=tibia.
Fig. 1. Pleurobranchus peronii Cuvier, 1804 in A report of four unrecorded species of opisthobranch molluscs from Korea
Fig. 1. Pleurobranchus peronii Cuvier, 1804 and Pleurobranchus weberi (Bergh, 1905). A. P. peronii (body length: 102 mm, width: 81 mm), living animal, dorsal view. B. P. weberi (body length: 92 mm, width: 78 mm), living animal, dorsal view. Scales=10 mm.
Fig. 2 in A report of four unrecorded species of opisthobranch molluscs from Korea
Fig. 2. Aplysiopsis nigra (Baba, 1949). A. dorsal view. B. ventral view. C. branchial papillae. D. ventral view of head and sole of foot. A-D. preserved specimen (body length: 23 mm, width: 4 mm). Scales=5 mm.
Fig. 2 in Report of 21 unrecorded bacterial species in Korea belonging to the phylum Actinobacteria, discovered during the survey in 2020
Fig. 2. Neighbor-joining phylogenetic tree based on 16S rRNA gene sequences showing the relationships between the strains isolated in this study and their relatives of the family Streptomycetaceae in the phylum Actinobacteria. Bootstrap values (>50%) are shown at branching points. Filled circles indicate the nodes also recovered in the maximum-likelihood and maximum-parsimony trees, and open circles indicate the nodes also recovered in only one of the trees. Bar, 0.005 substitutions per nucleotide position.
Fig. 1 in Report of 21 unrecorded bacterial species in Korea belonging to the phylum Actinobacteria, discovered during the survey in 2020
Fig. 1. Transmission electron or scanning electron micrographs of cells of the strains isolated in the study. Strains: 1, JHSTF-R7; 2, JH- STF-M27; 3, SO314; 4, CAU 1609; 5, CAU 1610; 6, CAU 1611; 7, CAU 1619; 8, MMS20-SJTR5; 9, MMS20-SJTR12; 10, MMS20-SJTN15; 11, MMS20-HV2-26; 12, MMS20-HV4-22; 13, MMS20-AI2-20; 14, DM17; 15, MA2; 16, MA30; 17, I2-3; 18, XY6; 19, SM6; 20, BT677; 21, BT654.
Fig. 3. A in A report of 35 unrecorded bacterial species belonging to the classes Alphaproteobacteria and Betaproteobacteria in Korea
Fig. 3. A neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the phylogenetic relationships between the strains isolated in this study and their relatives in the orders Burkholderiales and Rhodocyclales of the class of Betaproteobacteria. Bootstrap values (>70%) are shown above nodes. Scale bar: 0.01 changes per nucleotide.
Fig. 1 in A report of 35 unrecorded bacterial species belonging to the classes Alphaproteobacteria and Betaproteobacteria in Korea
Fig. 1. Transmission electron micrographs or scanning electron micrographs showing the cell morphologies of the strains isolated in this study. The strains were cultured at their optimal growth conditions. Strains: 1, YSTF-M5; 2, BSSL-BR9; 3, HMF5336; 4, HMF6093; 5, HMF6710; 6, KYW1791; 7, KYW1736; 8, KYW1376; 9, KYW1819; 10, FS72; 11, CAU 1521; 12, CAU 1595; 13, CAU 1597; 14, G119; 15, G187; 16, R36; 17, BT55; 18, BT341; 19, BT373; 20, 19D1A35; 21, 19D1V26; 22, 19D2A5; 23, 19D1F4; 24, MMS19-R33; 25, MMS19-T29; 26, HMF4787; 27, HMF5328; 28, CAU 1556; 29, BT39; 30, BT69; 31, BT358; 32, BT359; 33, BT367; 34, BT372; 35, BG9.
Fig. 1 in A report of unrecorded bacterial species of Korea isolated in 2016, belonging to the family Deinococcaceae and Planctomycetaceae
Fig. 1. Transmission electron micrographs of cells of the strains isolated in this study. The cells were cultured at their optimal growth conditions. Strains: 1, 6004; 2, CAU 1293.
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
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Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.