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759 results for “plant–plant interaction”
Drought neutralizes positive effects of long-term grazing on grassland productivity through altering plant-soil interactions
<p>Livestock grazing is among the most intensive land-use activities in grasslands and can affect plant communities directly or indirectly via grazing-induced soil legacies. Under climate change, grasslands are threatened globally by recurrent drought. However, the extent to which drought influences grazing-induced soil legacy effects on plant biomass production and community composition remains largely unexplored.</p> <p>We grew five naturally co-occurring plant species (three dominants and two subordinates) in mixed communities in a glasshouse experiment in live and sterilized soil that had or had not been subjected to 19 years of grazing; these plant communities were then exposed to a subsequent drought. We tested the treatment effects on plant community biomass, proportional aboveground biomass of individual species, arbuscular mycorrhizal (AM) fungal root colonization, and soil nutrient availability.</p> <p>Under drought-free conditions, soils from grazed plots produced significantly higher plant aboveground and total community biomass compared to soils from ungrazed plots. In contrast, plant aboveground and total community biomass were similar between grazed and ungrazed soils under drought conditions. Similarly, soils from grazed plots increased the proportional biomass of dominant species but decreased the proportion of subordinate species; however, the proportional biomass of dominant and subordinate species was similar between grazed and ungrazed soils under drought conditions. Soil NO3--N in grazed soil was significantly higher compared to ungrazed soil. Drought dramatically increased soil NO3--N in sterilized soil and had a more pronounced increase in grazed soil than in ungrazed soil. Arbuscular mycorrhizal fungal root colonization from grazed soil was lower compared to ungrazed soil. Drought significantly increased the soil available phosphorus concentration, as well as plant community AM fungal root colonization.</p> <p>Synthesis. Our study suggests that drought can neutralize positive grazing effects on plant community biomass production via altered plant-soil interactions. Also, we found that drought can alleviate the negative effects of grazing legacies on subordinate species by reducing the competitiveness of dominant species. Our study provides new insights for understanding the underlying mechanisms of grazing effects on grassland productivity under climate change.</p>
Plant species with larger extrafloral nectaries produce better quality nectar only when needed and favour interactions with best ant partners
<p>Few studies investigated the phenotypic plasticity of extrafloral nectary (EFN) functioning associated with indirect plant defense across species. Here, we experimentally investigate in three sympatric legume species the role of EFNs, hypothesizing that plant species with larger EFNs have higher induced nectar secretion after herbivory events, greater control over secretion, and are more likely to interact with more protective ant partners. We targeted 30 individuals of each legume species and estimated EFN size and activity in the field. We conducted field experiments to evaluate the phenotypic plasticity of nectar production after leaf damage and censused ant species feeding on EFNs. Plant species increased nectar after leaf damage but in different ways. Supporting our hypothesis, <em>C. duckeana</em>, with the largest EFNs, increased all nectar descriptors, taking its place as the most productive and intense post-herbivory induced response, attracting more dominant ants than the other plant species. The higher control over reward production in plant species with larger-sized EFN reflects an induction mechanism under damage that reduces costs and increases the potential benefits of indirect biotic defences. Together, these plant traits shape the patterns of ant attendance and defence against herbivores, possibly favouring the maintenance of plant protection mutualisms widespread in nature.</p>
Tropical plant–hummingbird interactions withstand short-term experimental removal of a common flowering plant
<p>In this study, we simulated the extirpation of a hummingbird-pollinated understory plant, <em>Heliconia tortuosa</em>, from tropical forest fragments using a replicated Before-After-Control-Impact (BACI) experimental design while quantifying hummingbird space use, foral visitation rates, and plant pollination success. Each response variable was measured during each experimental period (pre and post) in sites with and without <em>H. tortuosa </em>removal (treatment and control).</p>
The structure and ecological function of the interactions between plants and arbuscular mycorrhizal fungi through multilayer networks
<ol> <li>Arbuscular mycorrhizas are one of the most frequent mutualisms in terrestrial ecosystems. Although studies on plant mutualistic interaction networks suggest that they may leave their imprint on plant community structure and dynamics, this has not been explicitly assessed. Thus, in the context of plant-fungi interactions, studies explicitly linking plant-mycorrhizal fungi interaction networks with key ecological functions of plant communities, such as recruitment, are lacking. </li> <li>In this study, we analyse, in two Mediterranean forest communities of southern Iberian Peninsula, how plant-AMF networks modulate plant-plant recruitment interaction networks. We use a new approach integrating plant-AMF and plant recruitment networks into a single multilayer structure. We also develop a new metric (Interlayer Node Neighbourhood Integration, INNI) to explore the impact of a given node on the structure across layers.</li> <li>Similarity of plant species in their AMF communities is positively related to the observed frequency of recruitment interactions in the field. Results reveal that properties of plant-AMF networks, such as plant degree and centrality, contribute to explaining properties of the plant recruitment network, such as in- and out-degree (i.e. sapling bank and canopy service) and its modular structure. However, these relationships differed between the two forest communities. Finally, we identify particular AMF that contribute to integrating the neighbourhood of recruitment interactions between plants.</li> <li>This multilayer network approach is useful to explore the role of plant-AMF interactions on recruitment, a key ecosystem function enhanced by fungi. Results provide evidence that the complex structure of plant-AMF interactions impacts functional and structurally plant-plant interactions, which in turn may potentially influence plant community dynamics, through their effects on the structure of the recruitment network.</li> </ol>
Data from: Nesting and interaction of stingless bees (Apidae: Meliponini) in herbaceous plants in the Agricultural Campus of the School of Agricultural and Veterinary Sciences of UNAN-Leon, Nicaragua
<p>En este estudio se determinó la riqueza, abundancia, densidad y distribución geográfica de nidos de abejas sin aguijón en el Campus Agropecuario de la UNAN-León, de igual manera se determinó la interacción de abejas sin aguijón en plantas en floración. Asimismo, se identificaron los sustratos de anidación, se revisaron todos los árboles e infraestructura del Campus Agropecuario y se muestrearon las arvenses y arbusto en floración entre los meses de abril a octubre del 2022. </p>
Data for: Honey bees (Apis mellifera) modify plant-pollinator network structure, but do not alter wild species' interactions
<p>Honey bees (<em>Apis mellifera</em>) are widely used for honey production and crop pollination, raising concern for wild pollinators, as honey bees may compete with wild pollinators for floral resources. The first sign of competition, before changes appear in wild pollinator abundance or diversity, may be changes to wild pollinator interactions with plants. Such changes for a community can be measured by looking at changes to metrics of resource use overlap in plant-pollinator interaction networks. Studies of honey bee effects on plant-pollinator networks have usually not distinguished whether honey bees alter wild pollinator interactions, or if they merely alter total network structure by adding their own interactions. To test this question, we experimentally introduced honey bees to a Canadian grassland and measured plant-pollinator interactions at varying distances from the introduced hives. We found that honey bees increased the network metrics of pollinator and plant functional complementarity and decreased interaction evenness. However, in networks constructed from just wild pollinator interactions, honey bee abundance did not affect any of the metrics calculated. Thus, all network structural changes to the full network (including honey bee interactions) were due only to honey bee-plant interactions, and not to honey bees causing changes in wild pollinator-plant interactions. Given widespread and increasing use of honey bees, it is important to establish whether they affect wild pollinator communities. Our results suggest that honey bees did not alter wild pollinator foraging patterns in this system, even in a year that was drier than the 20-year average.</p>
Designing a Synthetic Microbial Community through Genome Metabolic Modeling to enhance Plant-Microbe Interaction
<p>Supplementary data 1 - <strong>Reconstructed genome-scale metabolic networks from MAGs and Hosts</strong></p> <p>Supplementary data 2 - P<strong>lant growth-promoting traits among members of the minimal community</strong></p> <p> </p> <p>Manipulating the rhizosphere microbial community through beneficial microorganism inoculation has gained interest in improving crop productivity and stress resistance. Synthetic microbial communities, known as SynCom, mimic natural microbial compositions while reducing the number of components. However, achieving this goal requires a comprehensive understanding of natural microbial communities and a careful selection of compatible microorganisms with colonization traits, which still pose challenges. In this study, we employed an <em>in-silico</em> approach using genome metabolic modeling to design a synthetic microbial community aimed at improving the yield of important crop plants. We used a targeted approach to select a minimal community (MinCom) encompassing essential compounds for microbial metabolism and compounds relevant to plant interactions. This resulted in a reduction of the initial community size by approximately 4.5-fold. Notably, the MinCom retained crucial genes associated with essential plant growth-promoting traits, such as iron acquisition, EPS production, potassium solubilization, nitrogen fixation, GABA production, and IAA-related tryptophan metabolism. Furthermore, our selection process for the SymCom, based on a comprehensive understanding of microbe-microbe-plant interactions, yielded a set of six hub species that displayed notable taxonomic novelty, including members of the Eremiobacterota and Verrucomicrobiota phyla. Our study contributes to the growing body of research on synthetic microbial communities and their potential to enhance agricultural practices. The insights gained from our in-silico approach and the selection of hub species pave the way for further investigations into the development of tailored microbial communities that can optimize crop productivity and improve stress resilience in agricultural systems.</p>
Data from: Plant-derived environmental DNA complements diversity estimates from traditional arthropod monitoring methods but outperforms them detecting plant-arthropod interactions
<p>Our limited knowledge about the ecological drivers of global arthropod decline highlights the urgent need for more effective biodiversity monitoring approaches. Monitoring of arthropods is commonly performed using passive trapping devices, which reliably recover diverse communities, but provide little ecological information on the sampled taxa. Especially the manifold interactions of arthropods with plants are barely understood. A promising strategy to overcome this shortfall is environmental DNA (eDNA) metabarcoding from plant material on which arthropods have left DNA traces through direct or indirect interactions. However, the accuracy of this approach has not been sufficiently tested. In four experiments, we exhaustively test the comparative performance of plant-derived eDNA from surface washes of plants and homogenized plant material against traditional monitoring approaches. We show that the recovered communities of plant-derived eDNA and traditional approaches only partly overlap, with eDNA recovering various additional taxa. This suggests eDNA as a useful complementary tool to traditional monitoring. Despite the differences in recovered taxa, estimates of community α- and β-diversity between both approaches are well correlated, highlighting the utility of eDNA as a broad scale tool for community monitoring. Last, eDNA outperforms traditional approaches in the recovery of plant-specific arthropod communities. Unlike traditional monitoring, eDNA revealed fine-scaled community differentiation between individual plants and even within plant compartments. Especially specialized herbivores are better recovered with eDNA. Our results highlight the value of plant derived eDNA analysis for large-scale biodiversity assessments that include information about community level interactions.</p>
Dataset: Plant-mediated effects of fire and fragmentation drive plant–pollinator interaction β-diversity in fire-dependent pine savannas
<p>Interaction β-diversity is a measure essential for understanding and conserving species interactions and ecosystem functioning. Interaction β-diversity explains the variation in species interactions across spatial and temporal gradients, resulting from species turnover or interaction rewiring. Each component of interaction β-diversity has different ecological implications and practical consequences. While interaction β-diversity due to species turnover is related to assembly processes and fragmentation, rewiring can support high biodiversity and confer resilience to ecological networks. However, it is unclear whether both components respond to the same or different ecological drivers. Here, we assessed the ecological drivers of plant–pollinator interaction β-diversity and its components across 24 sites in 9 longleaf pine (LLP) savannas in north and central Florida. We evaluated the effects of flowering plant composition and flower abundance, vegetation, fire regime, soil moisture, terrain characteristics, climate, spatial context and geographic location. We used path analysis to evaluate the drivers of spatial interaction β-diversity and its main components. We then used generalized linear mixed models to assess the temporal patterns of spatial β-diversity among sites within preserves. We found that plant–pollinator networks in LLP savannas are highly variable across space and time, mainly due to species turnover and possibly in response to abiotic gradients and dispersal boundaries. Flower abundance and flowering plant composition, geographic location, fire seasonality, soil moisture, and landscape context were the main drivers of plant–pollinator β-diversity, highlighting the role of fire management and habitat connectivity in preserving plant–pollinator networks.</p>
Quantitative interactions: the disease outcome of Botrytis cinerea across the plant kingdom
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Data from: The role of habitat simplification and seasonality in shaping interactions between ants, plants and herbivores in a Neotropical savanna
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Mutualism has its limits: consequences of asymmetric interactions between a well-defended plant and its herbivorous pollinator
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Pollinator interactions of native and introduced plants in smallholder tropical orchards across a gradient of anthropogenic landscapes
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Data from: Consequences of multiple flower-insect interactions for subsequent plant-insect interactions and plant reproduction
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Data supporting: Drivers of individual-based, antagonistic interaction networks during plant range expansion
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Disturbances in drylands: Interactions among herbivory, drought, and termite activity in savanna plant communities
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Data from: Ecosystem nitrogen retention is regulated by plant community trait interactions with nutrient status in an alpine meadow
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Data from: A meta-analysis of plant interaction networks reveals competitive hierarchies as well as facilitation and intransitivity
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Data from: Honey bees (Apis mellifera) modify plant-pollinator network structure, but do not alter wild species’ interactions
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Landscape simplification leads to loss of plant-pollinator interaction diversity and flower visitation frequency despite buffering by abundant generalist pollinators
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.