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1,880
datasets available to search
ShareScore release 0.9.0
Dataset results
1,880 results for “Dimensionality”
Lamins organize the three dimensional genome from nuclear periphery in ES cells
GEO Series GSE89520. Mus musculus. 40 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Human Monocyte Heterogeneity as Revealed by High-Dimensional Mass Cytometry
GEO Series GSE146447. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Interleukin-17A suppresses granular layer formation in a three-dimensional human epidermis model via regulation of terminal differentiation genes
GEO Series GSE142552. Homo sapiens. 6 samples. Type: Expression profiling by array.
Effect of Meflin overexpression on the fibroblast transcriptome in a three-dimensional culture using cell accumulation technique
GEO Series GSE301570. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Three-dimensional genome architecture persists in a 52,000-year-old woolly mammoth skin sample
GEO Series GSE268050. Bos taurus; Homo sapiens; Elephas maximus indicus; Equus asinus; Mammuthus primigenius. 136 samples. Type: Other; Third-party reanalysis.
Gene expression in a 3-dimensional human epidermal tissue culture model after water-filtered near-infrared irradiation
GEO Series GSE79394. Homo sapiens. 6 samples. Type: Expression profiling by array.
Morphological and Molecular Defects in Human Three-Dimensional Retinal Organoid Model of X-Linked Juvenile Retinoschisis
GEO Series GSE137910. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Regulation of the three-dimensional chromatin organization by transposable elements in pig spleen
GEO Series GSE237035. Sus scrofa. 2 samples. Type: Other.
Cartilaginous and osteochondral tissue formation by human mesenchymal stem cells on three-dimensionally woven scaffolds
GEO Series GSE119095. Homo sapiens; Bos taurus; Rattus norvegicus. 3 samples. Type: Expression profiling by high throughput sequencing.
Analysis of 3-dimensional genome of exhausted CD8+ T cells reveals a critical role of IRF8 in their terminal differentiation in cancer [RNA]
GEO Series GSE277972. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Retinoic acid induced meiosis initiation of female germline stem cells by remodeling three-dimensional chromatin structure [HiC]
GEO Series GSE195967. Mus musculus. 4 samples. Type: Other.
Gene expression in a three-dimensionally cultivated human hepatocellular carcinoma (HCC) model
GEO Series GSE41962. Homo sapiens. 9 samples. Type: Expression profiling by array.
Pseudogenes contribute to the evolution of topological domains across species via forming three-dimensional genome [RNA-Seq_mouse]
GEO Series GSE297129. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.
Bystander response to 2.5 Gy of protons in a human 3-dimensional skin model in 16 h after exposure
GEO Series GSE23803. Homo sapiens. 30 samples. Type: Expression profiling by array.
Pseudogenes contribute to the evolution of topological domains across species via forming three-dimensional genome [RNA-Seq]
GEO Series GSE246286. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Nanoengineered Osteoinductive Bioink for Three-Dimensional Bioprinting Bone Tissue
GEO Series GSE146309. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Two-dimensionally cultured functional hepatocytes generated from human induced pluripotent stem cell-derived hepatic organoids for pharmaceutical research
GEO Series GSE243384. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
On The Development of Realistic Multi-Dimensional Progenitor Models For Core-Collapse Supernovae
<p>Seven multi-dimensional core-collapse supernova progenitor models from work, 'On The Development of Realistic Multi-Dimensional Progenitor Models For Core-Collapse Supernovae'. Works that utilize these progenitor models are required to cite article [fields 2019]. All models are given at 424 seconds, less than a second before iron core-collapse. The 3D 4pi model was evolved to 424.31 seconds, the collapse time according to the 1D MESA model. All data are in FLASH4 format using the HDF5 data structure. </p>
Tomographic polarimetric Dataset of a Trabecular bone, used in the paper "Reconstructing three-dimensional optical anisotropy with tomographic Müller-polarimetric microscopy"
<p>Tomographic polarimetric Dataset of a Trabecular bone, used in the paper "Reconstructing three-dimensional optical anisotropy with tomographic Müller-polarimetric microscopy".</p> <p>In the compressed folder, there is :</p> <ul> <li>The raw data recorded by the camera during the tomographic polarimetric measurements (yellow_bone_ID_001_202418_1156.h5),</li> <li>The raw data were the shifts inside each projection, that occurs sometime between polarisation states, has been corrected manually (yellow_bone_ID_001_202418_1156_pre_processing_v2.h5)</li> <li>The binned, cropped and aligned data (yellow_bone_ID_001_20231218_1039_alignment_v2_2.mat)</li> <li>The 3D reconstruction of the index elipsoid at each voxel of the synthetic object (bir TT result 1.48200 & 1.4835 - scale[4, 0.000001] - coef [0.01,500] - reg weights 0.375&0.0025 - itr250.mat)</li> <li>The synthetic projections linked to this synthetic object (projections + reg weights 0.375&0.0025 + coef_tv [1.e-02 5.e+02] + itr250.mat)</li> </ul> <p>The reconstruction code will be published as part of our open-source software package MUMOTT including tutorials on our webpage (<a href="http://mumott.org/" target="_blank" rel="noopener noreferrer">mumott.org</a>), the data will be published over zenodo with the publication of the research paper. At the point of submission the code is available upon request<br><br>See linked publication for the full description of the dataset.</p>
Dataset related to the article "Head to Head Comparison between Different 3-Dimensional Echocardiographic Rendering Tools in the Imaging of Percutaneous Edge-to-Edge Mitral Valve Repair"
<p>This record contains raw data related to the article "Head to Head Comparison between Different 3-Dimensional Echocardiographic Rendering Tools in the Imaging of Percutaneous Edge-to-Edge Mitral Valve Repair"</p> <p>MitraClip (MC) is the most common percutaneous treatment for severe mitral regurgitation<br> (MR). An accurate two-dimensional and three-dimensional echocardiographic (3DTEE) imaging is<br> mandatory for the optimal procedural result. Recently transillumination 3DTEE rendering (3DTr) has<br> been introduced integrating a virtual light source into the dataset and with the addition of glass effect<br> (3DGl) allows to adjust tissue transparency improving depth perception and anatomical structure<br> delineation in comparison with the standard 3DTEE (3DSt). The aim of this retrospective study in<br> 30 patients undergoing MC, was to compare 3DSt, 3DTr, and 3DGl in mitral valve (MV) evaluation<br> and procedural result assessment. 3DTEE acquisitions obtained before and after MC were processed<br> with 3DSt, 3DTr, and 3DGl rendering. Each reconstruction was scored for quality and for ability<br> to recognize MV anatomy, MR origin, clip position, dimension and grasping. Imaging quality was<br> judged good or optimal in 52%, 76%, and 96% in 3DSt, 3DTr, and 3DGl reconstructions respectively.<br> In 26/30 patients a diagnostic incremental value was found with 3DTr vs. 3DSt and in 15/26 with<br> 3DGl vs. 3DTr and 3DSt. Only 3DGl with perpendicular cropping of the clip allowed to visualize and<br> measure the grasped portion of each mitral leaflets. 3DTEE imaging during MC may be improved<br> by 3DTr and 3DGl providing a better evaluation of MV, of leaflet grasping and of residual MR jets<br> after MC.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.