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zenodo28/100

Figure 19 in REVIEW ARTICLE Caprellids (Crustacea: Amphipoda) from the Gulf of Mexico, with observations on Deutella mayeri, redescription of Metaprotella hummelincki, a taxonomic key and zoogeographical comments

Figure 19. Pseudaeginella biscaynensis (McCain 1968). Yucatan, Mexico; CYMX-47-CY. Scale bar: 1 mm.

opennotspecifiedJul 2014View details →
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Figure 5 in REVIEW ARTICLE Caprellids (Crustacea: Amphipoda) from the Gulf of Mexico, with observations on Deutella mayeri, redescription of Metaprotella hummelincki, a taxonomic key and zoogeographical comments

Figure 5. Deutella incerta (Mayer 1903). Yucatan, Mexico; CYMX-10-CY. Scale bar: 1 mm.

opennotspecifiedJul 2014View details →
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Figure 2. Caprella equilibra Say, 1818 in REVIEW ARTICLE Caprellids (Crustacea: Amphipoda) from the Gulf of Mexico, with observations on Deutella mayeri, redescription of Metaprotella hummelincki, a taxonomic key and zoogeographical comments

Figure 2. Caprella equilibra Say, 1818. Texas, USA; BRTC 2–9489. Scale bar: 1 mm.

opennotspecifiedJul 2014View details →
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Figure 22. Phtisica marina Slabber, 1769 in REVIEW ARTICLE Caprellids (Crustacea: Amphipoda) from the Gulf of Mexico, with observations on Deutella mayeri, redescription of Metaprotella hummelincki, a taxonomic key and zoogeographical comments

Figure 22. Phtisica marina Slabber, 1769. Yucatan, Mexico; CYMX-78-CY. Scale bar: 1 mm.

opennotspecifiedJul 2014View details →
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Figure 7. Deutella mayeri Stebbing, 1895 in REVIEW ARTICLE Caprellids (Crustacea: Amphipoda) from the Gulf of Mexico, with observations on Deutella mayeri, redescription of Metaprotella hummelincki, a taxonomic key and zoogeographical comments

Figure 7. Deutella mayeri Stebbing, 1895. Yucatan, Mexico; male A, CYMX-11-CY. Scale bar: 0.1 mm.

opennotspecifiedJul 2014View details →
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Figure 1 in REVIEW ARTICLE Caprellids (Crustacea: Amphipoda) from the Gulf of Mexico, with observations on Deutella mayeri, redescription of Metaprotella hummelincki, a taxonomic key and zoogeographical comments

Figure 1. Sampling stations in the Gulf of Mexico.

opennotspecifiedJul 2014View details →
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Figure 17. Paracaprella pusilla Mayer, 1890 in REVIEW ARTICLE Caprellids (Crustacea: Amphipoda) from the Gulf of Mexico, with observations on Deutella mayeri, redescription of Metaprotella hummelincki, a taxonomic key and zoogeographical comments

Figure 17. Paracaprella pusilla Mayer, 1890. Yucatan, Mexico; CYMX-17-CY. Scale bar: 1 mm.

opennotspecifiedJul 2014View details →
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Figure 18. Paracaprella tenuis Mayer, 1903 in REVIEW ARTICLE Caprellids (Crustacea: Amphipoda) from the Gulf of Mexico, with observations on Deutella mayeri, redescription of Metaprotella hummelincki, a taxonomic key and zoogeographical comments

Figure 18. Paracaprella tenuis Mayer, 1903. Yucatan, Mexico; CYMX-25-CY. Scale bar: 1 mm.

opennotspecifiedJul 2014View details →
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Raw data for the article: Endoscopic ultrasound-guided biliary drainage of malignant stenosis, not treatable with endoscopic retrograde cholangiopancreatography: a single-center, prospective observational study

<p><strong>Background and study aims&nbsp;</strong>The therapeutic role of endoscopic ultrasound (EUS) evolved in recent decade,s opening a new chapter in the field of endoscopic biliary drainage (BD). EUS-BD has emerged as a new mini-invasive technique for neoplastic jaundice not amenable to endoscopic retrograde cholangiopancreatography (ERCP). The primary study aims were to assess the clinical efficacy of EUS-BD using an electrocautery-enhanced lumen apposing metal stent (ECE-LAMS) in patients with malignant biliary obstruction with failed\unfeasible ERCP and the adverse event (AE) rate. The secondary aims were to evaluate the technical success and incidence of jaundice recurrence.&nbsp;<strong>Patients and methods&nbsp;</strong>Data from All patients referred to our tertiary-care Institute with obstructive jaundice due to unresectable malignant distal biliary stricture and unfeasible\failed ERCP, were prospectively recorded from January 2015 to February 2018. The procedures were performed by a single-step ECE-LAMS (AXIOS-EC, Boston Scientific) placement, from the upper gut lumen to the biliary tree, for definitive biliary decompression.&nbsp;<strong>Results&nbsp;</strong>Twenty-one patients were consecutively enrolled. Mean pre-procedure common bile duct diameter was 16 mm and the bilirubin level was 13.9 mg/dL (range 3.8-29.5). LAMS was positioned from the duodenal bulb (n = 19) to gastric antrum (n = 2). We registered a 100 % of technical and clinical success. No AEs occurred. We observed a single case of delayed AE consisting of a buried LAMS, which was successfully resolved endoscopically.&nbsp;<strong>Conclusions&nbsp;</strong>Despite the limits of being non-comparative, our study shows outcomes in a homogeneous population in terms of indications and technique. EUS-BD with dedicated ECE-LAMS is associated with extremely good clinical efficacy and safety and can be considered as an alternative in cases of failed/unfeasible ERCP.</p>

opencc-by-4.0Aug 2021View details →
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Raw data for the article: Extracorporeal Life Support in Hemorrhagic Conditions: A Systematic Review

<p>Extracorporeal life support (ECLS) is indicated in refractory acute respiratory or cardiac failure. According to the need for anticoagulation, bleeding conditions (e.g., in trauma, pulmonary bleeding) have been considered a contraindication for the use of ECLS. However, there is increasing evidence for improved outcomes after ECLS support in hemorrhagic patients based on the benefits of hemodynamic support outweighing the increased risk of bleeding. We conducted a systematic literature search according to the PRISMA guidelines and reviewed publications describing ECLS support in hemorrhagic conditions. Seventy-four case reports, four case series, seven retrospective database observational studies, and one preliminary result of an ongoing study were reviewed. In total, 181 patients were identified in total of 86 manuscripts. The reports included patients suffering from bleeding caused by pulmonary hemorrhage (n = 53), trauma (n = 96), postpulmonary endarterectomy (n = 13), tracheal bleeding (n = 1), postpartum or cesarean delivery (n = 11), and intracranial hemorrhage (n = 7). Lower targeted titration of heparin infusion, heparin-free ECLS until coagulation is normalized, clamping of the endotracheal tube, and other ad hoc possibilities represent potential beneficial maneuvers in such conditions. Once the patient is cannulated and circulation restored, bleeding control surgery is performed for stabilization if indicated. The use of ECLS for temporary circulatory or respiratory support in critical patients with refractory hemorrhagic shock appears feasible considering tailored ECMO management strategies. Further investigation is needed to better elucidate the patient selection and ECLS management approaches.</p>

opencc-by-4.0Aug 2021View details →
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Data and analyses for journal article "Does brief FA and OM meditation affect the attentional blink?"

<p>Data for journal article &quot;Does brief FA and OM meditation affect the attentional blink?&quot;.</p>

openother-ncAug 2021View details →
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Dataset related to article "COVID-19 and Lombardy: TESTing the impact of the first wave of the pandemic"

<p>The .xlsx file contains raw data related to the article&nbsp;&quot;<strong>COVID-19 and Lombardy: TESTing the impact of the first wave of the pandemic</strong>.&nbsp;<em>EBioMedicine</em>. 2020 Nov;61:103069<em>&quot;,&nbsp;</em>available at the following&nbsp;<a href="https://www.thelancet.com/action/showPdf?pii=S2352-3964%2820%2930445-X">link</a>.</p> <p>&nbsp;</p> <p><strong>Abstract</strong></p> <p><em>Background</em>: Italy was the first western country to experience a large Coronavirus Disease 2019 (COVID-19) outbreak and the province of Bergamo experienced one of the deadliest COVID-19 outbreaks in the world. Following the peak of the epidemic in mid-March, the curve has slowly fallen thanks to the strict lockdown imposed by the Italian government on 9th March 2020.</p> <p><em>Methods</em>: We performed a cross-sectional study to assess the prevalence of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) infection in 423 workers in Bergamo province who returned to the workplace after the end of the Italian lockdown on 5th May 2020. To this end, we performed an enzyme-linked immunosorbent assay (ELISA) to detect the humoral response against SARS-CoV-2 and a nasopharyngeal swab to assess the presence of SARS-CoV-2 RNA by real-time reverse transcription polymerase chain reaction (rRT-PCR). As a secondary aim of the study, we validated a lateral flow immunochromatography assay (LFIA) for the detection of anti-SARS-CoV-2 antibodies.</p> <p><em>Findings</em>: ELISA identified 38.5% positive subjects, of whom 51.5% were positive for both IgG and IgM, 47.3% were positive only for IgG, but only 1.2% were positive for IgM alone. Only 23 (5.4%) participants tested positive for SARS-CoV-2 by rRT-PCR, although with high cycle thresholds (between 34 and 39), indicating a very low residual viral load that was not able to infect cultured cells. All these rRT-PCR positive subjects had already experienced seroconversion. When the ELISA was used as the comparator, the estimated specificity and sensitivity of the rapid LFIA for IgG were 98% and 92%, respectively.</p> <p><em>Interpretation</em>: the prevalence of SARS-CoV-2 infection in the province of Bergamo reached 38.5%, significantly higher than has been reported for most other regions worldwide. Few nasopharyngeal swabs tested positive in fully recovered subjects, though with a very low SARS-CoV-2 viral load, with implications for infectivity and discharge policies for positive individuals in the post-pandemic period. The rapid LFIA used in this study is a valuable tool for rapid serologic surveillance of COVID-19 for population studies.</p>

opencc-by-4.0Aug 2021View details →
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Dataset related to article "Manipulating Sirtuin 3 pathway ameliorates renal damage in experimental diabetes"

<p><em>The files&nbsp;contain&nbsp;raw data related to the article&nbsp;&quot;Manipulating Sirtuin 3 pathway ameliorates renal damage in experimental diabetes&quot;, available from&nbsp;<a href="https://www.nature.com/articles/s41598-020-65423-0">https://www.nature.com/articles/s41598-020-65423-0</a>.</em></p> <p><strong>Abstract of the manuscript</strong>: More effective treatments for diabetic nephropathy remain a major unmet clinical need. Increased oxidative stress is one of the most important pathological mechanisms that lead to kidney damage and functional impairment induced by diabetes. Sirtuin 3 (SIRT3) is the main mitochondrial deacetylase and critically regulates cellular reactive oxygen species (ROS) production and detoxification. Honokiol is a natural biphenolic compound that, by activating mitochondrial SIRT3, can carry out anti-oxidant, anti-inflammatory and anti-fibrotic activities. Here, we sought to investigate the renoprotective effects of honokiol in BTBR&nbsp;<em>ob/ob</em>&nbsp;mice with type 2 diabetes. Diabetic mice were treated with vehicle or honokiol between the ages of 8 and 14 weeks. Wild-type mice served as controls. Renal&nbsp;<em>Sirt3</em>&nbsp;expression was significantly reduced in BTBR&nbsp;<em>ob/ob</em>&nbsp;mice, and this was associated with a reduction in its activity and increased ROS levels. Selective activation of SIRT3 through honokiol administration translated into the attenuation of albuminuria, amelioration of glomerular damage, and a reduction in podocyte injury. SIRT3 activation preserved mitochondrial wellness through the activation of SOD2 and the restoration of PGC-1&alpha; expression in glomerular cells. Additionally, the protective role of SIRT3 in glomerular changes was associated with enhanced tubular&nbsp;<em>Sirt3</em>&nbsp;expression and upregulated renal&nbsp;<em>Nampt</em>&nbsp;levels, indicating a possible tubule-glomerulus retrograde interplay, which resulted in improved glomerular SIRT3 activity. Our results demonstrate the hitherto unknown renoprotective effect of SIRT3 against diabetic glomerular disease and suggest that the pharmacological modulation of SIRT3 activity is a possible novel approach to treating diabetic nephropathy.</p>

opencc-by-4.0Sep 2020View details →
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Results and further resources concerning our pre-studies concerning revealing biases in news articles

<p>Slanted news coverage strongly affects public opinion. This is especially true for coverage on politics and related issues, where studies have shown that bias in the news may strongly influence elections and other collective decisions. Due to its viable importance, news coverage has long been studied in the social sciences, resulting in comprehensive models to describe it and effective yet costly methods to analyze it, such as content analysis. We present an in-progress system for news recommendation that is the first to automate the manual procedure of content analysis to reveal person-targeting biases in news articles reporting on policy issues. In a large-scale user study, we find very promising results regarding this interdisciplinary research direction. Our recommender detects and reveals substantial frames that are actually present in individual news articles. In contrast, prior work rather only facilitates the visibility of biases, e.g., by distinguishing left- and right-wing outlets. Further, our study shows that recommending news articles that differently frame an event significantly improves respondents&#39; awareness of bias.</p>

openSep 2021View details →
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Raw data repository for the article: Influence of Contacts and Applied Voltage on a Structure of a Single GaN Nanowire

<p>The archive NWrawdata.zip contains information about the raw data collected at P10 beamline at PETRA III during this experiment, which is shown in Figs. 4, 5, and 6 of the main text.</p>

opencc-by-4.0Sep 2021View details →
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Figures and data associated with the article: Rendaku in place names across Japanese dialects

<p>The rendaku morphophonological alternation between voiceless and voiced obstruents in compounds is largely irregular, but it is observed in all Japanese dialects. However, whether dialectal differences in&nbsp;frequencyof rendaku exist has never been investigated. As a first step toward elucidating dialectal differences in the occurrence of rendaku, we examined the rendaku rate of six morphemes in place names from all Japan. The results of our exploratory study indicate that there is no clear geographical pattern in the differences in rendaku frequency, and that it varies between morphemes.</p> <p>The rendaku rate for each region was&nbsp;plotted on a map of Japan with a gradient color. A lighter color indicates a higher rate of rendaku, and a darker color a lower one. White color indicates the absence of data, i.e. no place name containing the morpheme under study was found in the prefecture.</p>

opencc-by-4.0Nov 2018View details →
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Recharging process of commercial floating-gate MOS transistor in dosimetry application (raw data from journal article)

<p>This upload contains raw data from the manuscript &quot;Recharging process of commercial floating-gate MOS transistor in dosimetry application&quot;.&nbsp;The manuscript was published in Microelectronics Reliability, vol. 126, &nbsp;p.114322, 2021; DOI:&nbsp;https://doi.org/10.1016/j.microrel.2021.114322</p> <p>The upload consists of a .pdf file of the manuscript and .vsz&nbsp;files with raw data related to the figures in the manuscript. Each&nbsp;.vsz file is linked with raw data from the text files (.txt) and placed in a folder with the name and an ordinal&nbsp;number of the figure in the publication.&nbsp;Additionally, a .pdf output file of the&nbsp;Veusz program&nbsp;(freely available) is placed in each folder.</p> <p>This work was partly supported by the European Union&rsquo;s Horizon 2020 research and innovation programme (Grant No. 857558) and the Ministry of Education, Science and Technology Development of the Republic of Serbia (Project No. 43011 and Project No.451-03-9/2021-14/200026).</p>

opencc-by-4.0Oct 2021View details →
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MN-DS: A Multilabeled News Dataset for News Articles Hierarchical Classification

<p><strong>Overview</strong></p> <p>This dataset contains 10,917 news articles with hierarchical news categories collected between January 1st 2019, and December 31st 2019 classified by using NewsCodes Media Topic taxonomy. We manually labelled the articles based on a hierarchical taxonomy with 17 first-level and 109 second-level categories.</p> <p>This dataset can be used to train machine learning models for automatically classifying news articles by topic. This dataset can be helpful for researchers working on news structuring, classification, and predicting future events based on released news.</p> <p><strong>Reproducibility of results</strong></p> <p>The results presented in the research paper &quot;MN-DS: A Multilabeled News Dataset for News Articles Hierarchical Classification&quot;, technical validation can be reproduced using functions in <a href="https://github.com/alinapetukhova/mn-ds-news-classification">github repository</a>.</p> <p><strong>Licenses</strong></p> <p>The dataset is made available under a <a href="https://creativecommons.org/licenses/by/4.0/">CC-BY 4.0</a> license (see `LICENSE_DATA.txt`).</p>

opencc-by-4.0Dec 2022View details →
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Data accompanying article "A Bayesian Approach to CT Reconstruction with Uncertain Geometry"

<p>This record contains three datasets for reproducing the results of the paper</p> <p>&quot;A Bayesian Approach to CT Reconstruction with Uncertain Geometry&quot;&nbsp;</p> <p>by&nbsp;</p> <p>Frederik H. Pedersen, Jakob S. J&oslash;rgensen and Martin S. Andersen</p> <p>currently available as a preprint at</p> <p>https://arxiv.org/abs/2203.01045</p> <p>The datafiles are provided as mat-files saved from MATLAB. Using these files, and the accompanying codes at github the results and figures of the paper can be reproduced. Each of the files correspond to one of the three cases presented in the paper.</p>

opencc-by-4.0Dec 2022View details →
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Supplementary materials for article on 'A Register-Based Study of Interior Monologue in James Joyce's Ulysses', submitted to 'Literature'

<p>See the data availability statement</p>

opencc-by-4.0Dec 2022View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

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