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Dataset results
46 results for “HMC”
Dataset shown on the HMC FAIR Data Dashboard as of June 2023
<p>This dataset contains literature metadata harvested for 15 research centers of the Helmholtz Association of German research centers (KIT, FZJ, DESY, AWI, DLR, GFZ, HZB, GEOMAR, MDC, UFZ, HZDR, DZNE, GSI, CISPA, HMGU) during the first two quarters of 2023 as well as metadata of linked data publications, as extracted from the ScholExplorer API. F-UJI scores for these data publications are based on F-UJI version 1.4.7 using the FAIRsFAIR metrics 0.4. The status of the data represents the data shown on the HMC Dashboard on Open and FAIR Data in Helmholtz (<a title="https://fairdashboard.helmholtz-metadaten.de/" href="https://fairdashboard.helmholtz-metadaten.de/">https://fairdashboard.helmholtz-metadaten.de/</a>) as of June 2023.</p>
hmc development testing repo
<p>This is <em>NOT</em> the Human Microbiome Compendium dataset. This is a repository used for development testing to make sure our systems are interacting politely with Zenodo. The data isn't up to date. Don't use this. <a href="https://doi.org/10.5281/zenodo.8186993">You want the real one</a></p>
HMC_visualisation_and_source_data_SS_v1.0.2
<p>This is the the code and data for:</p> <p>"Rethinking a hybrid malaria chemoprevention delivery strategy for children in sub-perennial settings: a modelling study integrating age- and seasonally-targeted delivery"</p> <p>Swapnoleena Sen1,2, David Schellenberg3, Melissa A Penny4,5*</p> <p>1Swiss Tropical and Public Health Institute, Allschwil, Switzerland</p> <p>2University of Basel, Basel, Switzerland</p> <p>3London School of Hygiene and Tropical Medicine, London, United Kingdom</p> <p><span lang="EN-IN">4The Kids Research Institute Australia, Nedlands, WA, Australia</span></p> <p><span lang="EN-IN">5Centre for Child Health Research, The University of Western Australia, Crawley, WA, Australia</span></p> <p>*Correspondence to: Prof Melissa A Penny (<a href="mailto:melissa.penny@uwa.edu.au">melissa.penny@uwa.edu.au</a>)</p> <p>In this study, using a validated individual-based malaria model combined with pharmacological models of drug action (OpenMalaria), we examined the potential public health impact of a proposed hybrid malaria chemoprevention (HMC, for children 03-24 months), and an age-expanded HMC (referred as HMC+, for children 03-36 months), under different assumptions of drug sensitivity, coverage, and prevalence (5-70%).</p> <p>The details of running OpenMalaria model, data generation and analysis (including R scripts used for preparing the source data files) for this study can be found in a separate "OpenMalaria_workflow_HMC_modeling_SS" repository (DOI: 10.5281/zenodo.13804293). </p> <p>Here the plotting functionalities are described. The repository is strcutured based on figures reported in the manuscript. Each figure has a folder as per its name that includes: 1) R code to plot figure 2) source data files and 3) one PNG and one PDF version of the figure. </p> <p>Please note: i) "dependencies.R" specifies all package information and dependencies in which the simulation, analysis scripts and plotting scripts are tested and stable. <br>ii) The R scripts rely on the folder structure and working directories used by the researchers. To replicate figures, you will need to adjust the file paths.</p>
Effect of Self-care Skill Education on the Compassionate Satisfaction and Compassionate Fatigue Among Clinical Nurses Clinical Nurses at HMC
ClinicalTrials.gov study NCT05983497. IPD Sharing: NO. Countries: 1. Publications: 0.
IP of 5-methylcytosine (5-hmC) enriched DNA fragments from control and PB treated mouse livers (1 day)
GEO Series GSE41395. Mus musculus. 10 samples. Type: Methylation profiling by genome tiling array.
5-hmC in the brain: abundance in synaptic genes and differences at the exon-intron boundary (tiling array)
GEO Series GSE40166. Mus musculus; Homo sapiens. 786 samples. Type: Methylation profiling by genome tiling array.
Integrated detection of both 5-mC and 5-hmC by high-throughput tag sequencing technology highlights methylation reprogramming of bivalent genes during cellular differentiation [DGE]
GEO Series GSE40953. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide profile of 5-hydroxymethylcytosine (5-hmC) in H9 human embryonic stem cells (hESCs)
GEO Series GSE113236. Homo sapiens. 1 samples. Type: Methylation profiling by high throughput sequencing.
HIF-1 directly induces TET3 expression to redistribute 5-hydroxymethylcytosine and induce erythroid gene expression in hypoxia [5-hmC]
GEO Series GSE142869. Homo sapiens. 11 samples. Type: Methylation profiling by high throughput sequencing.
MenSCs inhibit HCC growth through oncogenic pathway suppression via regulating 5-hmC in enhancer elements [hMeDIP-seq]
GEO Series GSE120141. Homo sapiens. 8 samples. Type: Methylation profiling by high throughput sequencing.
Retinoic acid and ascorbate synergize to suppress myeloid leukemia via TET2 activation [hmC-seq (CRISPR)]
GEO Series GSE298863. Homo sapiens. 12 samples. Type: Methylation profiling by high throughput sequencing.
IP of 5-hydroxymethylcytosine (5-hmC) enriched DNA fragments from control ,PB treated mouse livers , resulting Ctnnb1 mutated PB liver tumours and PB minus Ha-Ras mutate liver tumour
GEO Series GSE77726. Mus musculus. 8 samples. Type: Methylation profiling by genome tiling array.
5-hmC in the brain: abundance in synaptic genes and differences at the exon-intron boundary (MRE-Seq)
GEO Series GSE40158. Homo sapiens. 9 samples. Type: Methylation profiling by high throughput sequencing.
Identification of novel target genes of nerve growth factor (NGF) in human mastocytoma cell line (HMC-1 (V560G c-Kit)) by transcriptome analysis
GEO Series GSE28045. Homo sapiens. 4 samples. Type: Expression profiling by array.
MenSCs inhibit HCC growth through oncogenic pathway suppression via regulating 5-hmC in enhancer elements
GEO Series GSE120160. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
IP of 5-methylcytosine (5-hmC) enriched DNA fragments from control and PB treated mouse livers (7 day)
GEO Series GSE41392. Mus musculus. 10 samples. Type: Methylation profiling by genome tiling array.
Integrated detection of both 5-mC and 5-hmC by high-throughput tag sequencing technology highlights methylation reprogramming of bivalent genes during cellular differentiation [HMST-Seq]
GEO Series GSE41069. Homo sapiens. 12 samples. Type: Methylation profiling by high throughput sequencing.
MenSCs inhibit HCC growth through oncogenic pathway suppression via regulating 5-hmC in enhancer elements [RNA-seq]
GEO Series GSE120158. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
MenSCs inhibit HCC growth through oncogenic pathway suppression via regulating 5-hmC in enhancer elements [MeDIP-seq]
GEO Series GSE120085. Homo sapiens. 8 samples. Type: Methylation profiling by high throughput sequencing.
IP of 5-methylcytosine (5-hmC) enriched DNA fragments from control and PB treated mouse livers (91 day)
GEO Series GSE41397. Mus musculus. 10 samples. Type: Methylation profiling by genome tiling array.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.