Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
2
datasets available to search
ShareScore release 0.9.0
Dataset results
2 results for “Hifi test dataset”
Test datasets for the IWC workflow Assembly-Hifi-only-VGP3
<p>Test datasets for the workflow Assembly-Hifi-only-VGP3</p> <p>Datasets : </p> <ul> <li>Hifi reads</li> <li>Meryl database</li> <li>Genomescope profile summary</li> </ul> <p> </p>
A hifi testing dataset derived from SRR13128014 (zymo D6331)
<p>This is a small dataset subsampled from SRR13128014 which represents a mock community, zymoBIOMICS D6331.</p> <p> </p> <p>We extraced E.coli reads by alignment, then used `seqtk subseq read.fq.gz 0.1` to randomly pick 10% from them. This is created for testing if hifiasm-meta (https://github.com/xfengnefx/hifiasm-meta ) runs. For r57, it roughly needs 170s on 48 threads with peak memory of 18GB. Refer to the tar.gz file for expected results. Hicanu and metaflye should be able to successfully run on this dataset as well.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.