Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
10
datasets available to search
ShareScore release 0.9.0
Dataset results
10 results for “Hypoxylaceae”
FIGURE 3 in Two new species of Hypoxylon (Hypoxylaceae) from China based on morphological and DNA sequence data analyses
FIGURE 3. Hypoxylon jianfengense (Holotype FACATAS 845). A. Stromata on wood. B. Stromatal surface and ostioles. C, D. Stroma in vertical section showing the perithecia and tissue below the perithecial layer. E. KOH-extractable pigments. F. Stromatal granules in water. G. Mature and immature asci in water. H. Asci in Melzer's reagent. I. Immature asci in water. J, K. Mature asci in water. L. Apical apparatus in Melzer' s reagent. M. Ascospore in water showing germ slit. N. Ascospores in water. O. Ascospores in 10% KOH. P. Ascospore under SEM. Bars: A = 5 mm; B = 0.3 mm; C = 0.5 mm; D = 0.1 mm; G, I–K = 20 µm; H, L–O = 10 µm; P = 2.5 µm.
FIGURE 1 in Two new species of Hypoxylon (Hypoxylaceae) from China based on morphological and DNA sequence data analyses
FIGURE 1. Phylogenetic tree of Hypoxylon based on the multigene alignment of ITS-LSU-RPB2-TUB2 in the Maximum Likelihood analyses (RaxML). Support values of Maximum Likelihood (ML), Maximum Parsimony (MP) and Bayesian (B) analyses (bootstrap support above 50%, posterior probability value above 0.95) are displayed above or below the respective branches (ML/MP/BA).
FIGURE 2 in Two new species of Hypoxylon (Hypoxylaceae) from China based on morphological and DNA sequence data analyses
FIGURE 2. Hypoxylon larissae (Holotype FACATAS 844). A. Stromata on wood. B, C. Stromatal surface and ostioles. D, E. Stroma in vertical section showing the perithecia and tissue below the perithecial layer. F. KOH-extractable pigments. G. Stromatal granules in water. H. Mature and immature asci in Melzer's reagent. I. Asci in Melzer's reagent. J. Immature asci in water. K. Mature asci in water. L. Ascospores in water. M. Ascospores in 10% KOH. N. Ascospores in water showing germ slit. O. Apical apparatus in Melzer's reagent. P. Ascospore under SEM. Bars: A = 5 mm;B, C, E = 0.4 mm; D = 1 mm; H–K = 20 µm; L–O = 10 µm; P = 5 µm.
FIGURE 2 in Taxonomy and phylogeny of Hypoxylon zhaotongensis sp. nov. (Hypoxylaceae, Xylariales), a bambusicolous fungus from Yunnan, China
FIGURE 2. Hypoxylon zhaotongensis (GMB 1373, holotype). a Stromata on dead Bamboo. b Stromatal surface and ostioles. c–e Vertical sections of stromata. f Peridium. g Branching paraphyses. h Pigments of stromata in 10% KOH solution. i "J+" apical apparatus. j–n Asci in water. o Ascus in Melzer's reagent. p–q Ascospores. r Ascospore showing germ slit. s, t Cultures on PDA from above and below. Scale bars: b–c = 100 μm; d = 250 μm; e = 300 μm; f, g, i–m, o–q = 20 μm; n = 30 μm; r = 15 μm.
FIGURE 1 in Taxonomy and phylogeny of Hypoxylon zhaotongensis sp. nov. (Hypoxylaceae, Xylariales), a bambusicolous fungus from Yunnan, China
FIGURE 1. Phylogenetic tree derived from the best scoring RAxML analysis based on combined datasets (LSU–ITS–RPB2–β-tubulin). The tree is rooted to Xylaria arbuscula (CBS 126415), Xylaria hypoxylon (CBS 122620), Graphostroma platystomum (CBS 270.87) and Natonodosa speciosa (CLM-RV86). Bootstrap values for maximum likelihood (MLBP) and Bayesian posterior probabilities (BYPP) equal to or greater than 50% and 0.95, are given at the respective branches. Hyphen (-) means a value lower than 50 % (BS) or 0.95 (PP). Cultures from the holotype and epitype specimens are labeled as T and ET, respectively. New isolates are labeled in bold.
FIGURE 1 in Taxonomy and phylogeny of Hypoxylon zhaotongensis sp. nov. (Hypoxylaceae, Xylariales), a bambusicolous fungus from Yunnan, China
FIGURE 1. (Continued) Phylogenetic tree derived from the best scoring RAxML analysis based on combined datasets (LSU–ITS–RPB2– β-tubulin).
TABLE 1 in Taxonomy and phylogeny of Hypoxylon zhaotongensis sp. nov. (Hypoxylaceae, Xylariales), a bambusicolous fungus from Yunnan, China
<p><b>TABLE 1.</b> Names, strain numbers, and corresponding GenBank accession numbers of the taxa used in this study. Cultures from holotype and epitype specimens are labeled as T and ET respectively. Species highlighted in bold were derived from this study. “/” means sequences data are unavailable in the GenBank database.</p><table><tbody><tr><th></th><th></th><th></th><th><b>GenBank accession numbers</b></th><th></th></tr></tbody><tbody><tr><th><b>Species name</b></th><td><b>Strain numbers</b></td><td><b>Types</b></td><td></td><td></td><td></td><td></td></tr><tr><th></th><td></td><td></td><td><b>ITS</b></td><td><b>LSU</b></td><td><i>RPB2</i></td><td><i>β-tubulin</i></td></tr><tr><th><i>Annulohypoxylon annulatum</i></th><td>CBS 140775</td><td>ET</td><td>KY610418</td><td>KY610418</td><td>KY624263</td><td>KX376353</td></tr><tr><th><i>Annulohypoxylon michelianum</i></th><td>CBS 119993</td><td></td><td>KX376320</td><td>KY610423</td><td>KY624234</td><td>KX271239</td></tr><tr><th><i>Annulohypoxylon truncatum</i></th><td>CBS 140778</td><td>ET</td><td>KY610419</td><td>KY610419</td><td>KY624277</td><td>KX376352</td></tr><tr><th><i>Daldinia bambusicola</i></th><td>CBS 122872</td><td>T</td><td>KY610385</td><td>KY610431</td><td>KY624241</td><td>AY951688</td></tr><tr><th><i>Daldinia childiae</i></th><td>CBS 122881</td><td>T</td><td>KU683757</td><td>MH874773</td><td>KU684290</td><td>KU684129</td></tr><tr><th><i>Daldinia concentrica</i></th><td>CBS 113277</td><td></td><td>AY616683</td><td>KY610434</td><td>KY624243</td><td>KC977274</td></tr><tr><th><i>Daldinia dennisii</i></th><td>CBS 114741</td><td>T</td><td>JX658477</td><td>KY610435</td><td>KY624244</td><td>KC977262</td></tr><tr><th><i>Daldinia eschscholtzii</i></th><td>MUCL 45435</td><td></td><td>JX658484</td><td>KY610437</td><td>KY624246</td><td>KC977266</td></tr><tr><th><i>Daldinia petriniae</i></th><td>MUCL 49214</td><td>ET</td><td>AM749937</td><td>KY610439</td><td>KY624248</td><td>KC977261</td></tr><tr><th><i>Daldinia placentiformis</i></th><td>MUCL 47603</td><td></td><td>AM749921</td><td>KY610440</td><td>KY624249</td><td>KC977278</td></tr><tr><th><i>Daldinia vernicosa</i></th><td>CBS 119316</td><td>ET</td><td>KY610395</td><td>KY610442</td><td>KY624252</td><td>KC977260</td></tr><tr><th><i>Durotheca rogersii</i></th><td>YMJ 92031201</td><td></td><td>EF026127</td><td>/</td><td>JX507794</td><td>EF025612</td></tr><tr><th><i>Durotheca comedens</i></th><td>YMJ 90071615</td><td>T</td><td>EF026128</td><td>/</td><td>JX507793</td><td>EF025613</td></tr><tr><th><b>Species name</b></th><td><b>Strain numbers</b></td><td><b>Types</b></td><td></td><td></td><td></td><td></td></tr><tr><th></th><td></td><td></td><td><b>ITS</b></td><td><b>LSU</b></td><td><i>RPB2</i></td><td><i>β-tubulin</i></td></tr><tr><th><i>Durotheca crateriformis</i></th><td>GMBC0205</td><td>T</td><td>MH645426</td><td>MH645425</td><td>MH645427</td><td>MH049441</td></tr><tr><th><i>Durotheca guizhouensis</i></th><td>GMBC0065</td><td>T</td><td>MH645423</td><td>MH645421</td><td>MH645422</td><td>MH049439</td></tr><tr><th><i>Durotheca rogersii</i></th><td>GMBC0204</td><td></td><td>MH645433</td><td>MH645434</td><td>MH645435</td><td>MH049449</td></tr><tr><th><i>Graphostroma platystomum</i></th><td>CBS 270.87</td><td>T</td><td>JX658535</td><td>DQ836906</td><td>KY624296</td><td>HG934108</td></tr><tr><th><i>Hypomontagnella barbarensis</i></th><td>STMA 14081</td><td>T</td><td>MK131720</td><td>MK131718</td><td>MK135891</td><td>MK135893</td></tr><tr><th><i>Hypomontagnella monticulosa</i></th><td>MUCL 54604</td><td></td><td>KY610404</td><td>KY610487</td><td>KY624305</td><td>KX271273</td></tr><tr><th><i>Hypomontagnella submonticulosa</i></th><td>CBS 115280</td><td></td><td>KC968923</td><td>KY610457</td><td>KY624226</td><td>KC977267</td></tr><tr><th><i>Hypoxylon addis</i></th><td>MUCL 52797</td><td>T</td><td>KC968931</td><td>ON954141</td><td>OP251037</td><td>KC977287</td></tr><tr><th><i>Hypoxylon aveirense</i></th><td>MUM 19.40</td><td>T</td><td>MN053021</td><td>ON954142</td><td>OP251028</td><td>MN066636</td></tr><tr><th><i>Hypoxylon baruense</i></th><td>UCH9545</td><td>T</td><td>MN056428</td><td>ON954143</td><td>/</td><td>MK908142</td></tr><tr><th><i>Hypoxylon canariense</i></th><td>MUCL 47224</td><td></td><td>ON792787</td><td>ON954140</td><td>OP251029</td><td>ON813073</td></tr><tr><th><i>Hypoxylon carneum</i></th><td>MUCL 54177</td><td></td><td>KY610400</td><td>KY610480</td><td>KY624297</td><td>KX271270</td></tr><tr><th><i>Hypoxylon cercidicola</i></th><td>CBS 119009</td><td></td><td>KC968908</td><td>KY610444</td><td>KY624254</td><td>KC977263</td></tr><tr><th><i>Hypoxylon chionostomum</i></th><td>STMA 14060</td><td></td><td>KU604563</td><td>ON954144</td><td>OP251030</td><td>ON813072</td></tr><tr><th><i>Hypoxylon chrysalidosporum</i></th><td>FCATAS2710</td><td>T</td><td>OL467294</td><td>OL615106</td><td>OL584222</td><td>OL584229</td></tr><tr><th><i>Hypoxylon crocopeplum</i></th><td>CBS 119004</td><td></td><td>KC968907</td><td>KY610445</td><td>KY624255</td><td>KC977268</td></tr><tr><th><i>Hypoxylon cyclobalanopsidis</i></th><td>FCATAS2714</td><td>T</td><td>OL467298</td><td>OL615108</td><td>OL584225</td><td>OL584232</td></tr><tr><th><i>Hypoxylon erythrostroma</i></th><td>MUCL 53759</td><td></td><td>KC968910</td><td>ON954154</td><td>OP251031</td><td>KC977296</td></tr><tr><th><i>Hypoxylon eurasiaticum</i></th><td>MUCL 57720</td><td>T</td><td>MW367851</td><td>/</td><td>MW373852</td><td>MW373861</td></tr><tr><th><i>Hypoxylon fendleri</i></th><td>MUCL 54792</td><td></td><td>KF234421</td><td>KY610481</td><td>KY624298</td><td>KF300547</td></tr><tr><th><i>Hypoxylon ferrugineum</i></th><td>CBS 141259</td><td></td><td>KX090079</td><td>/</td><td>/</td><td>KX090080</td></tr><tr><th><i>Hypoxylon fragiforme</i></th><td>MUCL 51264</td><td>ET</td><td>KC477229</td><td>KM186295</td><td>MK887342</td><td>KX271282</td></tr><tr><th><i>Hypoxylon fuscoides</i></th><td>MUCL 52670</td><td>T</td><td>ON792789</td><td>ON954145</td><td>OP251038</td><td>ON813076</td></tr><tr><th><i>Hypoxylon fuscum</i></th><td>CBS 113049</td><td>ET</td><td>KY610401</td><td>KY610482</td><td>KY624299</td><td>KX271271</td></tr><tr><th><i>Hypoxylon gibriacense</i></th><td>MUCL 52698</td><td>T</td><td>KC968930</td><td>ON954146</td><td>OP251026</td><td>ON813074</td></tr><tr><th><i>Hypoxylon griseobrunneum</i></th><td>CBS 331.73</td><td>T</td><td>KY610402</td><td>KY610483</td><td>KY624300</td><td>KC977303</td></tr><tr><th><i>Hypoxylon guilanense</i></th><td>MUCL 57726</td><td>T</td><td>MT214997</td><td>MT214992</td><td>MT212235</td><td>MT212239</td></tr><tr><th><i>Hypoxylon haematostroma</i></th><td>MUCL 53301</td><td>ET</td><td>KC968911</td><td>KY610484</td><td>KY624301</td><td>KC977291</td></tr><tr><th><i>Hypoxylon hainanense</i></th><td>FCATAS2712</td><td>T</td><td>OL467296</td><td>OL616132</td><td>OL584224</td><td>OL584231</td></tr><tr><th><i>Hypoxylon hinnuleum</i></th><td>ATCC 36255,MUCL 3621</td><td>T</td><td>MK287537</td><td>MK287549</td><td>MK287562</td><td>MK287575</td></tr><tr><th><i>Hypoxylon hongheensis</i></th><td>KUMCC 21-0452</td><td></td><td>OM001333</td><td>OM001334</td><td>ON392008</td><td>ON468655</td></tr><tr><th><i>Hypoxylon hongheensis</i></th><td>HKAS 122663</td><td>T</td><td>OM001336</td><td>OM001339</td><td>ON392009</td><td>ON468656</td></tr><tr><th><i>Hypoxylon howeanum</i></th><td>MUCL 47599</td><td></td><td>AM749928</td><td>KY610448</td><td>KY624258</td><td>KC977277</td></tr><tr><th><i>Hypoxylon hypomiltum</i></th><td>MUCL 51845</td><td></td><td>KY610403</td><td>KY610449</td><td>KY624302</td><td>KX271249</td></tr><tr><th><b>Species name</b></th><td><b>Strain numbers</b></td><td><b>Types</b></td><td></td><td></td><td></td><td></td></tr><tr><th></th><td></td><td></td><td><b>ITS</b></td><td><b>LSU</b></td><td><i>RPB2</i></td><td><i>β-tubulin</i></td></tr><tr><th><i>Hypoxylon invadens</i></th><td>MUCL 51475</td><td>T</td><td>MT809133</td><td>MT809132</td><td>MT813037</td><td>MT813038</td></tr><tr><th><i>Hypoxylon investiens</i></th><td>CBS 118183</td><td></td><td>KC968925</td><td>KY610450</td><td>KY624259</td><td>KC977270</td></tr><tr><th><i>Hypoxylon isabellinum</i></th><td>MUCL 53308</td><td>T</td><td>KC968935</td><td>/</td><td>OP251032</td><td>KC977295</td></tr><tr><th><i>Hypoxylon laschii</i></th><td>MUCL 52796</td><td></td><td>JX658525</td><td>/</td><td>OP251027</td><td>ON813075</td></tr><tr><th><i>Hypoxylon lateripigmentum</i></th><td>MUCL 53304</td><td>T</td><td>KC968933</td><td>KY610486</td><td>KY624304</td><td>KC977290</td></tr><tr><th><i>Hypoxylon lechatii</i></th><td>MUCL 54609</td><td></td><td>KF923407</td><td>/</td><td>OP251033</td><td>KF923405</td></tr><tr><th><i>Hypoxylon lenormandii</i></th><td>CBS 119003</td><td></td><td>KC968943</td><td>KY610452</td><td>KY624261</td><td>KC977273</td></tr><tr><th><i>Hypoxylon lienhwacheense</i></th><td>MFLUCC14-1231</td><td></td><td>KU604558</td><td>MK287550</td><td>MK287563</td><td>KU159522</td></tr><tr><th><i>Hypoxylon lividipigmentum</i></th><td>STMA14045</td><td></td><td>ON792788</td><td>/</td><td>/</td><td>ON813077</td></tr><tr><th><i>Hypoxylon lividipigmentum</i></th><td>BCRC 34077</td><td></td><td>JN979433</td><td>/</td><td>/</td><td>AY951735</td></tr><tr><th><i>Hypoxylon macrocarpum</i></th><td>CBS 119012</td><td></td><td>ON792785</td><td>/</td><td>OP251034</td><td>ON813071</td></tr><tr><th><i>Hypoxylon munkii</i></th><td>MUCL 53315</td><td></td><td>KC968912</td><td>/</td><td>OP251035</td><td>KC977294</td></tr><tr><th><i>Hypoxylon musceum</i></th><td>MUCL 53765</td><td></td><td>KC968926</td><td>KY610488</td><td>KY624306</td><td>KC977280</td></tr><tr><th><i>Hypoxylon ochraceum</i></th><td>MUCL 54625</td><td>ET</td><td>KC968937</td><td>/</td><td>KY624271</td><td>KC977300</td></tr><tr><th><i>Hypoxylon olivaceopigmentum</i></th><td>DSM 107924</td><td>T</td><td>MK287530</td><td>MK287542</td><td>MK287555</td><td>MK287568</td></tr><tr><th><i>Hypoxylon perforatum</i></th><td>CBS115281</td><td></td><td>KY610391</td><td>KY610455</td><td>KY624224</td><td>KX271250</td></tr><tr><th><i>Hypoxylon petriniae</i></th><td>CBS 114746</td><td>T</td><td>KY610405</td><td>KY610491</td><td>KY624279</td><td>KX271274</td></tr><tr><th><i>Hypoxylon pilgerianum</i></th><td>STMA 13455</td><td></td><td>KY610412</td><td>KY610412</td><td>KY624308</td><td>KY624315</td></tr><tr><th><i>Hypoxylon porphyreum</i></th><td>CBS 119022</td><td></td><td>KC968921</td><td>KY610456</td><td>KY624225</td><td>KC977264</td></tr><tr><th><i>Hypoxylon pseudofuscum</i></th><td>DSM112038</td><td>T</td><td>MW367857</td><td>MW367848</td><td>MW373858</td><td>MW373867</td></tr><tr><th><i>Hypoxylon pulicicidum</i></th><td>CBS 122622</td><td>T</td><td>JX183075</td><td>KY610492</td><td>KY624280</td><td>JX183072</td></tr><tr><th><i>Hypoxylon rickii</i></th><td>MUCL 53309</td><td>ET</td><td>KC968932</td><td>KY610416</td><td>KY624281</td><td>KC977288</td></tr><tr><th><i>Hypoxylon rubiginosum</i></th><td>MUCL 52887</td><td>ET</td><td>KC477232</td><td>KY610469</td><td>KY624266</td><td>KY624311</td></tr><tr><th><i>Hypoxylon samuelsii</i></th><td>MUCL 51843</td><td>ET</td><td>KC968916</td><td>KY610466</td><td>KY624269</td><td>KC977286</td></tr><tr><th><i>Hypoxylon sporistriatatunicum</i></th><td>UCH9542</td><td>T</td><td>MN056426</td><td>/</td><td>OP251036</td><td>MK908140</td></tr><tr><th><i>Hypoxylon subticinense</i></th><td>MUCL 53752</td><td></td><td>KC968913</td><td>/</td><td>/</td><td>KC977297</td></tr><tr><th><i>Hypoxylon texense</i></th><td>DSM 107933</td><td>T</td><td>MK287536</td><td>MK287548</td><td>MK287561</td><td>MK287574</td></tr><tr><th><i>Hypoxylon ticinense</i></th><td>CBS 115271</td><td></td><td>JQ009317</td><td>KY610471</td><td>KY624272</td><td>AY951757</td></tr><tr><th><i>Hypoxylon trugodes</i></th><td>MUCL 54794</td><td>ET</td><td>KF234422</td><td>KY610493</td><td>KY624282</td><td>KF300548</td></tr><tr><th><i>Hypoxylon vogesiacum</i></th><td>CBS 115273</td><td></td><td>KC968920</td><td>KY610417</td><td>KY624283</td><td>KX271275</td></tr><tr><th><i>Hypoxylon wuzhishanense</i></th><td>FCATAS2708</td><td>T</td><td>OL467292</td><td>OL615104</td><td>OL584220</td><td>OL584227</td></tr><tr><th><i>Hypoxylon zhaotongensis</i></th><td><b>GMBCC1168</b></td><td><b>T</b></td><td><b>OP597690</b></td><td><b>OP598100</b></td><td><b>OP615662</b></td><td><b>OP615660</b></td></tr><tr><th><i>Hypoxylon zhaotongensis</i></th><td><b>GMBCC1157</b></td><td></td><td><b>OP597691</b></td><td><b>OP598101</b></td><td><b>OP615663</b></td><td><b>OP615661</b></td></tr><tr><th><i>Jackrogersella cohaerens</i></th><td>CBS 119126</td><td></td><td>KY610396</td><td>KY610497</td><td>KY624270</td><td>KY624314</td></tr><tr><th><b>Species name</b></th><td><b>Strain numbers</b></td><td><b>Types</b></td><td></td><td></td><td></td><td></td></tr><tr><th></th><td></td><td></td><td><b>ITS</b></td><td><b>LSU</b></td><td><i>RPB2</i></td><td><i>β-tubulin</i></td></tr><tr><th><i>Jackrogersella multiformis</i></th><td>CBS 119016</td><td>ET</td><td>KC477234</td><td>KY610473</td><td>KY624290</td><td>KX271262</td></tr><tr><th><i>Natonodosa speciosa</i></th><td>CLM-RV86</td><td>T</td><td>MF380435</td><td>MF380435</td><td>MH745150</td><td>/</td></tr><tr><th><i>Parahypoxylon papillatum comb. nov.</i></th><td>ATCC 58729</td><td>T</td><td>KC968919</td><td>KY610454</td><td>KY624223</td><td>KC977258</td></tr><tr><th><i>Parahypoxylon ruwenzoriense sp. nov.</i></th><td>MUCL51392</td><td>T</td><td>ON792786</td><td>/</td><td>OP251039</td><td>ON813078</td></tr><tr><th><i>Pyrenopolyporus hunteri</i></th><td>MUCL 52673</td><td>ET</td><td>KY610421</td><td>KY610472</td><td>KY624309</td><td>KU159530</td></tr><tr><th><i>Pyrenopolyporus laminosus</i></th><td>MUCL 53305</td><td>T</td><td>KC968934</td><td>KY610485</td><td>KY624303</td><td>KC977292</td></tr><tr><th><i>Pyrenopolyporus nicaraguense</i></th><td>CBS 117739</td><td></td><td>AM749922</td><td>KY610489</td><td>KY624307</td><td>KC977272</td></tr><tr><th><i>Rhopalostroma angolense</i></th><td>CBS 126414</td><td></td><td>KY610420</td><td>KY610459</td><td>KY624228</td><td>KX271277</td></tr><tr><th><i>Rostrohypoxylon terebratum</i></th><td>CBS 119137</td><td>T</td><td>DQ631943</td><td>DQ840069</td><td>DQ631954</td><td>DQ840097</td></tr><tr><th><i>Ruwenzoria pseudoannulata</i></th><td>MUCL 51394</td><td>T</td><td>KY610406</td><td>KY610494</td><td>KY624286</td><td>KX271278</td></tr><tr><th><i>Thamnomyces dendroidea</i></th><td>CBS 123578</td><td>T</td><td>FN428831</td><td>KY610467</td><td>KY624232</td><td>KY624313</td></tr><tr><th><i>Xylaria arbuscula</i></th><td>CBS 126415</td><td></td><td>KY610394</td><td>KY610463</td><td>KY624287</td><td>KX271257</td></tr><tr><th><i>Xylaria hypoxylon</i></th><td>CBS 122620</td><td>ET</td><td>KY610407</td><td>KY610495</td><td>KY624231</td><td>KX271279</td></tr></tbody></table><p>......continued on the next page</p><p>......continued on the next page</p><p>......continued on the next page</p><p><b>Abbreviations: CBS:</b> Culture collection of the Westerdijk Fungal Biodiversity Institute, Utrecht, Netherlands; <b>MUCL:</b> Agrofood & Environmental Fungal Collection; <b>GMBC:</b> Guizhou Medical University Culture Collection; <b>STMA:</b> HZI culture collection, Helmholtz Centre for Infection Research, Braunschweig, Germany; <b>MUM:</b> Micoteca da Universidade do Minho; <b>UCH:</b> Universidad Autonoma de Chiriqui; <b>FCATAS:</b> Fungarium of the Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences; <b>KUMCC:</b> Kunming Institute of Botany Culture Collection; <b>HKAS:</b> Cryptogamic Herbarium of Kunming Institute of Botany, Chinese Academy of Sciences; <b>MFLUCC:</b> Mae Fah Luang University Culture Collection, Chiang Rai, Thailand; <b>JF:</b> Jonkershoek Forestry Research Centre, Environment Affairs Department; <b>BCRC:</b> Bioresource Collection and Research Center; <b>DSM:</b> Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH; <b>GMBCC:</b> Guizhou Medical University Culture Collection, Guiyang, China; <b>CLM -RV:</b> -; <b>ATCC:</b> American Type Culture Collection; <b>YMJ:</b> YuMing, Ju; “-”: not available in the abbreviations.</p>
Supplementary material 1 from: Cedeño-Sanchez M, Charria-Girón E, Lambert C, Luangsa-ard JJ, Decock C, Franke R, Brönstrup M, Stadler M (2023) Segregation of the genus Parahypoxylon (Hypoxylaceae, Xylariales) from Hypoxylon by a polyphasic taxonomic approach. MycoKeys 95: 131-162. https://doi.org/10.3897/mycokeys.95.98125
Supplementary information
TABLE 2 in Taxonomy and phylogeny of Hypoxylon zhaotongensis sp. nov. (Hypoxylaceae, Xylariales), a bambusicolous fungus from Yunnan, China
<p><b>TABLE 2.</b> Diagnostic characteristics of <i>Hypoxylon zhaotongensis</i> and closely related species. The main differences in morphology are highlighted in red blod. “-”: not available in the protologue.</p><table><tbody><tr><th><b>Species</b></th><th><i>H. hongheensis</i> (Yang <i>et al</i>. 2022)</th><th><i>H. pilgerianum</i> (Ju & Rogers 1996)</th><th><i>H. wuzhishanense</i> (Ma <i>et al</i>. 2022)</th><th><i>H. zhaotongensis</i> (this study)</th></tr></tbody><tbody><tr><th><b>Stromata</b></th><td>Aggregated, reddish-brown (a52a2a) to brown (a52a2a) stromata, ostioles at the same level of the stromatal surface</td><td>Dark purple (800080) stromata, ostioles lower than the stromatal surface</td><td>Aggregated, rust Livid purple (800080) to brown brick (a52a2a) stromata, ostioles lower than the stromatal surface</td><td>Aggregated, purple (800080) to brown brick (a52a2a) stromata, <b>ostioles barely to slightly higher than the stromatal surface</b></td></tr><tr><th><b>KOH-extractable pigments</b></th><td>Dark orange (ff8c00)</td><td>-</td><td>Yellowish-brown (996515)</td><td><b>Yellowish-brown (996515)</b></td></tr><tr><th><b>Perithecia (width × high) (mm)</b></th><td>0.3–0.45 × 0.3–0.5</td><td>0.2–0.3 × 0.1–0.2</td><td>0.2–0.3 diam. × 0.1–0.2 high</td><td>0.1–0.5 × <b>0.2–0.6</b></td></tr><tr><th><b>Apical apparatus (high × broad) (µm)</b></th><td>“J+” apical apparatus</td><td>“J+” apical apparatus, 0.5–1 high × 2.5 broad</td><td>“J+” apical apparatus, 1–1.9 high × 2.2–3.4 broad</td><td>“J+” apical apparatus, <b>0.5 high × 3.0–3.5 broad</b></td></tr><tr><th><b>Ascospores (µm)</b></th><td>9–11 × 4.5–5.5</td><td>10–12 × 4–5</td><td>9.5–14 × 5.4–6.7</td><td><b>10–20 × 7–9</b></td></tr><tr><th><b>Germ slit (µm)</b></th><td>Without germ slit</td><td>Straight germ slit</td><td>With straight to less frequently sigmoid germ slit spore-length</td><td>Straight germ slit</td></tr></tbody></table>
The Lignicolous Genus Entonaema: Its Phylogenetic– Taxonomic Position within Hypoxylaceae (Xylariales, Fungi) and an Overview of its Species, Biogeography, and Ecology
<p>Abstract: The lignicolous saprotrophic genus <em>Entonaem</em>a contains six formally accepted species: <em>E. liquescens</em> (type species), <em>E. cinnabarinum</em>, <em>E. globosum</em>, <em>E. dengii</em>, <em>E. moluccanum</em>, and <em>E. siamensis</em>. Its stromatic ascomata develop on the surface of dead wood remnants; they are rather large, globose to irregularly shaped, and vividly coloured. The fresh stroma interior is filled with a liquid matter. In early studies, the genus was considered to have a preference for tropical habitats, while in more recent field research, numerous collections have been added from warm, temperate areas of Europe, North America, and Asia. Our taxonomic and phylogenetic studies were based on freshly collected <em>E. cinnabarinum</em> from Croatia and <em>E. liquescens</em> from the USA. A phylogenetic study of the sequence alignment of four concatenated gene regions (ITS, LSU, <em>rpb2</em>, and <em>β-tub</em>) revealed the true taxonomic position of <em>Entonaema</em> within <em>Hypoxylaceae</em> (<em>Xylariales</em>), a sister to <em>Hypoxylon carneum</em>. Detailed macroscopic and microscopic descriptions of <em>E. cinnabarinum</em> are accompanied by drawings and colour photographs, while the study of <em>E. liquescens</em> is focused on stromatal microchemical reaction. With new information, the worldwide identification key to the putative species of <em>Entonaema</em> is proposed. Ecological data and biogeographical patterns were studied using all available and reliable sources of recorded data. Climatic preferences of the two most widespread <em>Entonaema</em> species, <em>E. liquescens</em> and <em>E. cinnabarinum</em>, are discussed in detail. </p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.