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10 results for “Rhododendron ferrugineum”
AFLP dataset and sequence alignments from a study of Rhododendron ferrugineum across the whole species range.
<p>STRUCTURE DATASET</p> <p>The raw data are in the files:</p> <ol> <li>Rfe_KAR_AAT-CAC2_2017-10-18-16-55-16.zip</li> <li>Rfe_KAR_ATC-CAC_2017-10-25-12-39-28.zip</li> <li>Rfe_KAR_ATG-CTG2_2017-10-24-09-40-25.zip</li> </ol> <p>Population data: populations.txt</p> <p>The final structure file: Rfe.str</p> <p>We analysed the obtained results in GeneMapper (Applied Biosystems) with default settings for AFLP analysis. The combinations of selective starters amplified the following numbers of polymorphic markers: AAT-CAC=127 (mean=40,4; SD=8,1), ATC-CAC=119 (mean=35,3; SD=5,4), ATG-CTG=144 (mean=44,4; SD=5,0). The blank samples yielded 0, 6 and 5 markers, respectively, which were removed from the final data matrix. We also removed the markers present in only one individual. Three samples (one from each of the populations L22, K27 and S05) failed to amplify in one of the selective primer reactions and were thus removed from the final matrix. The estimated error rate was 2.87% and the final matrix comprises of 87 individuals and 254 polymorphic loci.</p> <p>SEQUENCE ALIGNMENTS</p> <ol> <li>Rfe_ITS_align.fas</li> <li>Rfe_rpl32-trnL_align.fas </li> <li>Rfe_RPS12-RPL20_align.fas </li> <li>Rfe_trnfM-trnS_align.fas </li> <li>Rfe_trnLF_align.fas </li> </ol>
Rhododendron ferrugineum decontaminated FSCR
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Rhododendron ferrugineum decontaminated gx
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Rhododendron ferrugineum SPAdes preassembly
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Figure 6 from: Huemer P, Schmid J (2021) Relict populations of Lyonetia ledi Wocke, 1859 (Lepidoptera, Lyonetiidae) from the Alps indicate postglacial host-plant shift to the famous Alpenrose (Rhododendron ferrugineum L.). Alpine Entomology 5: 101-106. https://doi.org/10.3897/alpento.5.76930
Figure 6 Final instar larva of Lyonetia ledi on Rhododendron ferrugineum (Switzerland, Graubünden, Ardez).
Figures 2- 3 from: Huemer P, Schmid J (2021) Relict populations of Lyonetia ledi Wocke, 1859 (Lepidoptera, Lyonetiidae) from the Alps indicate postglacial host-plant shift to the famous Alpenrose (Rhododendron ferrugineum L.). Alpine Entomology 5: 101-106. https://doi.org/10.3897/alpento.5.76930
Figures 2- 3 Lyonetia ledi adults resting on leaves of Rhododendron ferrugineum (Switzerland, Graubünden, Ardez).
Figure 1 from: Huemer P, Schmid J (2021) Relict populations of Lyonetia ledi Wocke, 1859 (Lepidoptera, Lyonetiidae) from the Alps indicate postglacial host-plant shift to the famous Alpenrose (Rhododendron ferrugineum L.). Alpine Entomology 5: 101-106. https://doi.org/10.3897/alpento.5.76930
Figure 1 COI Neighbor-Joining tree of species in the studied Lyonetia. Note: the scale bar only applies to internal branches between species. Width of triangles represent sample size, depth the genetic variation within the cluster.
Figures 4- 5 from: Huemer P, Schmid J (2021) Relict populations of Lyonetia ledi Wocke, 1859 (Lepidoptera, Lyonetiidae) from the Alps indicate postglacial host-plant shift to the famous Alpenrose (Rhododendron ferrugineum L.). Alpine Entomology 5: 101-106. https://doi.org/10.3897/alpento.5.76930
Figures 4- 5 Leaf-mines of Lyonetia ledi on Rhododendron ferrugineum (Switzerland, Graubünden, Ardez).
Figures 7- 8 from: Huemer P, Schmid J (2021) Relict populations of Lyonetia ledi Wocke, 1859 (Lepidoptera, Lyonetiidae) from the Alps indicate postglacial host-plant shift to the famous Alpenrose (Rhododendron ferrugineum L.). Alpine Entomology 5: 101-106. https://doi.org/10.3897/alpento.5.76930
Figures 7- 8 Characteristic cocoon with final instar larva and pupa of Lyonetia ledi on Rhododendron ferrugineum (Switzerland, Graubünden, Ardez).
Figure 9 from: Huemer P, Schmid J (2021) Relict populations of Lyonetia ledi Wocke, 1859 (Lepidoptera, Lyonetiidae) from the Alps indicate postglacial host-plant shift to the famous Alpenrose (Rhododendron ferrugineum L.). Alpine Entomology 5: 101-106. https://doi.org/10.3897/alpento.5.76930
Figure 9 Habitat of Lyonetia ledi in Engadine/Switzerland with Rhododendron ferrugineum.
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