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11 results for “Serial Crystallography”
Serial synchrotron crystallography dataset and 3D-ED dataset - HEWL crystals obtained by instant crystallization with TbXo4
<h2>Data sets related to the publication "Nucleating Agent Crystallophore Induces Instant Protein Crystallization" by Sauter et al.</h2> <p><em><strong>3D-Electron Diffraction data</strong></em>: The raw data obtained on the protein Hen Egg-White Lysozyme is contained in the file <em>RAW-Data_3D-ED_deposition.tar.bz2</em>.</p> <p>Results of first rounds of model refinement are contained in <em>3D-ED-affi_4-5sets</em> files</p> <p><em><strong>Synchrotron Serial Crystallography data</strong></em>: The raw SSX data obtained on the protein Hen Egg-White Lysozyme can be accessed through <a href="https://doi.org/10.15151/ESRF-DC-1823716276">https://doi.org/10.15151/ESRF-DC-1823716276</a>.</p> <p>Results of first rounds of model refinement are contained in <em>SSX-Xo4-supernatent</em> files</p>
Serial Crystallography with Multi-stage Merging oi 1000's of Images
<p>In the associated paper we discuss the issues involved in improving the sensitivity of both approaches to clustering, using, as an example, 999 5 degree wedges from lysozyme in four iso-forms:</p> <p> NAG: native with N-acetylglucosamine (NAG) soaked in,<br> benzamadine: native with benzamadine soaked in,<br> benzamadine plus NAG: native with both NAG and benzamadine soaked in.<br> Native: no ligands</p> <p>Although the cell parameters are changed sufficiently to allow recognition of the NAG soak, it is difficult to filter the benzamadine soak simply on the basis of cell parameter changes, suggesting the desirability of switching from cell-based clustering to reflection-based clustering as early in the process as possible. </p> <p>The data is this dataset consists of a bzipped HKL structure factor tarball and a bzipped cluster data files from the four forms tarball.</p>
Raw Data from Fluoroacetate Dehalogenase Solved by Serial Oscillation Crystallography (1° oscillation per crystal), PDB 6MUH
<p>This is the raw data for PDB 6MUH: Fluoroacetate dehalogenase, room temperature structure solved by serial 1 degree oscillation crystallography.</p> <p>Data was taken at Beamline G3 of CHESS at 10.2 keV (1.2155 Å). Collection date was 2018-03-04. Beam size 7 µm V x 9 µm H, flux 2e11 ph/s. Detector: Dectris EIGER X 1M. Data format: Dectris HDF5 for EIGER. Rotation was counterclockwise about the laboratory Z-axis ( 0 -1 0 in the XDS coordinate system). Detector distance was 45 mm.</p> <p>One degree from each data well was collected, at 0.2° per frame. Each well has five data frames. Data was collected in four successive iterations, labeled 000-003, of 1600 wells; each *master.h5 corresponds to 8000 data frames. </p>
Room-temperature structure of lysozyme by fixed-target pink-beam serial synchrotron crystallography
<p>Title: Room-temperature structure of lysozyme by fixed-target pink-beam serial synchrotron crystallography</p> <p>Data: Hit images</p> <p>Depositors: Yongsam Kim and Ki Hyun Nam</p> <p>Synchrotron: Pohang Light Source II</p> <p>Beamline: 1C</p> <p>Technique: Fixed-target pink-beam serial synchrotron crystallography</p>
Room-temperature structure of glucose isomerase by fixed-target pink-beam serial synchrotron crystallography
<p>Title: Room-temperature structure of glucose isomerase by fixed-target pink-beam serial synchrotron crystallography</p> <p>Data: Hit images</p> <p>Depositors: Yongsam Kim and Ki Hyun Nam</p> <p>Synchrotron: Pohang Light Source II</p> <p>Beamline: 1C</p> <p>Technique: Fixed-target pink-beam serial synchrotron crystallography</p>
Room-temperature structure of lysozyme by pink-beam serial crystallography (50ms / center)
<p>Room-temperature structure of lysozyme by pink-beam serial crystallography (50ms / center)</p> <p>Depositors: Yongsam Kim and Ki Hyun Nam</p> <p>Experiment date: Sep 28, 2022</p> <p>Synchrotron: Pohang Light Source II</p> <p>Beamline: 1C</p>
Room-temperature structure of lysozyme by pink-beam serial crystallography (50ms / edge)
<p>Room-temperature structure of lysozyme by pink-beam serial crystallography (50ms / edge)</p> <p>Depositors: Yongsam Kim and Ki Hyun Nam</p> <p>Experiment date: Sep 28, 2022</p> <p>Synchrotron: Pohang Light Source II</p> <p>Beamline: 1C</p>
Room-temperature structure of lysozyme by pink-beam serial crystallography (100ms, center)
<p>Room-temperature structure of lysozyme by pink-beam serial crystallography (100ms, center)</p> <p>Depositors: Yongsam Kim and Ki Hyun Nam</p> <p>Experiment date: Sep 28, 2022</p> <p>Synchrotron: Pohang Light Source II</p> <p>Beamline: 1C</p>
Serial crystallography dataset - PhP1
<p>Data collected on protein PhP1 with the mesh and collect method at the ESRF.</p>
Serial crystallography dataset - pb9
<p>Serial crystallography dataset on protein pb9, obtained with the mesh and collect technique.</p>
Room-temperature structure of lysozyme by pink-beam serial crystallography (100ms / edge)
<p>Room-temperature structure of lysozyme by pink-beam serial crystallography (100ms / edge)</p> <p>Depositors: Yongsam Kim and Ki Hyun Nam</p> <p>Experiment date: Sep 28, 2022</p> <p>Synchrotron: Pohang Light Source II</p> <p>Beamline: 1C</p>
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