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54 results for “textbooks”

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zenodo48/100

Introduction to Ancient Metagenomics Textbook (Edition 2025): de novo Genome Assembly

<p>Data and conda software environment file for the chapter &#39;<em>de novo</em> Genome Assembly&#39; of the SPAAM Community&#39;s textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>

opencc-by-4.0Sep 2024View details →
zenodo48/100

Introduction to Ancient Metagenomics Textbook (Edition 2025): Authentication

<div> <p>Data and conda software environment file for the chapter 'Authentication' of the SPAAM Community's textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p> </div>

opencc-by-4.0Sep 2024View details →
zenodo48/100

Introduction to Ancient Metagenomics Textbook (Edition 2025): Introduction to Git(Hub)

<p>Data and conda software environment file for the chapter &#39;Introduction to Git(Hub)&#39; of the SPAAM Community&#39;s textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>

opencc-by-4.0Sep 2024View details →
zenodo48/100

Introduction to Ancient Metagenomics Textbook (Edition 2025): Introduction to R and the Tidyverse

<p>Data and conda software environment file for the chapter &#39;Introduction to R and the Tidyverse&#39; of the SPAAM Community&#39;s textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>

opencc-by-4.0Sep 2024View details →
zenodo48/100

Introduction to Ancient Metagenomics Textbook (Edition 2025): Introduction to the Command Line

<p>Data and conda software environment file for the chapter 'Introduction to the Command Line' of the SPAAM Community's textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>

opencc-by-4.0Sep 2024View details →
zenodo48/100

Introduction to Ancient Metagenomics Textbook (Edition 2025): Introduction to Python and Pandas

<p>Data and conda software environment file for the chapter &#39;Introduction to Python and Pandas&#39; of the SPAAM Community&#39;s textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>

opencc-by-4.0Sep 2024View details →
zenodo48/100

Introduction to Ancient Metagenomics Textbook (Edition 2025): Phylogenomics

<p>Data and conda software environment file for the chapter &#39;Phylogenomics&#39; of the SPAAM Community&#39;s textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>

opencc-by-4.0Sep 2024View details →
zenodo48/100

Introduction to Ancient Metagenomics Textbook (Edition 2025): Genome Mapping

<p>Data and conda software environment file for the chapter &#39;Genome Mapping&#39; of the SPAAM Community&#39;s textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>

opencc-by-4.0Sep 2024View details →
zenodo48/100

Introduction to Ancient Metagenomics Textbook (Edition 2025): Taxonomic Profiling, OTU Tables, and Visualisation

<p>Data and conda software environment file for the chapter &#39;Taxonomic Profiling, OTU Tables, and Visualisation&#39; of the SPAAM Community&#39;s textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>

opencc-by-4.0Sep 2024View details →
zenodo48/100

Introduction to Ancient Metagenomics Textbook (Edition 2025): Ancient Metagenomic Pipelines

<p>Data and conda software environment file for the chapter &#39;Ancient Metagenomic Pipelines&#39; of the SPAAM Community&#39;s textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>

opencc-by-4.0Sep 2024View details →
zenodo48/100

Introduction to Ancient Metagenomics Textbook (Edition 2025): Contamination

<p>Data and conda software environment file for the chapter 'Contamination' of the SPAAM Community's textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>

opencc-by-4.0Sep 2024View details →
zenodo44/100

Introduction to Ancient Metagenomics Textbook (Edition 2023): Authentication and Decontamination

<p>Data and conda software environment file for the chapter &#39;Authentication and Decontamination&#39; of the SPAAM Community&#39;s textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>

opencc-by-4.0Oct 2023View details →
zenodo40/100

Introduction to Ancient Metagenomics Textbook (Edition 2025): Accessing Ancient Metagenomic Data

<p>Data and conda software environment file for the chapter &#39;Accessing Ancient Metagenomic<br> Data&#39; of the SPAAM Community&#39;s textbook: Introduction to Ancient Metagenomics (https://www.spaam-community.org/intro-to-ancient-metagenomics-book).</p>

opencc-by-4.0Sep 2024View details →
dryad40/100

Sampling bias exaggerates a textbook example of a trophic cascade

<p>Understanding trophic cascades in terrestrial wildlife communities is a major challenge because these systems are difficult to sample properly. We show how a tradition of nonrandom sampling has confounded this understanding in a textbook system (Yellowstone National Park) where carnivore [<em>Canis lupus</em> (wolf)] recovery is associated with a trophic cascade involving changes in herbivore [<em>Cervus canadensis</em> (elk)] behavior and density that promote plant regeneration. Long-term data indicate a practice of sampling only the tallest young plants overestimated regeneration of overstory aspen (<em>Populus tremuloides</em>) by a factor of 3-8 compared to random sampling because it favored plants taller than the preferred browsing height of elk and overlooked non-regenerating aspen stands. Random sampling described a trophic cascade, but it was weaker than the one that nonrandom sampling described. Our findings highlight the critical importance of basic sampling principles (e.g., randomization) for achieving an accurate understanding of trophic cascades in terrestrial wildlife systems.</p>

opencc-zeroNov 2021View details →
zenodo40/100

Fig. 3 in Navigating through ocean literacy gaps: an analysis of elementary school textbooks in Croatian education Abstract

Fig. 3: Presence of ocean literacy principles (OLP) and concepts (OLC) in higher grades of the elementary school science textbooks in Croatia (grades 5-8). Results are presented as average occurrence and standard deviation of books analysed for each grade.

opencc-by-4.0Feb 2024View details →
zenodo40/100

Fig. 2 in Navigating through ocean literacy gaps: an analysis of elementary school textbooks in Croatian education Abstract

Fig. 2: Presence of ocean literacy principles (OLP) and concepts (OLC) in lower grades of the elementary school science textbooks in Croatia (grades 1-4). Results are presented as average occurrence and standard deviation of books analysed for each grade.

opencc-by-4.0Feb 2024View details →
zenodo40/100

Fig. 1 in Navigating through ocean literacy gaps: an analysis of elementary school textbooks in Croatian education Abstract

Fig. 1: Mean contribution of pages with ocean-related topics in the text (A) and illustration (B) in the Croatian elementary school textbooks. Error bars represent the standard deviation among different publishers or textbook lines.

opencc-by-4.0Feb 2024View details →
zenodo40/100

Fig. 4 in Navigating through ocean literacy gaps: an analysis of elementary school textbooks in Croatian education Abstract

Fig. 4: Best-case scenario of presence of ocean sciences topics according to OL principles and concepts in the elementary school textbooks in Croatia.

opencc-by-4.0Feb 2024View details →
zenodo40/100

CATCH EyoU: WP6 Textbook Analysis Sweden - offshoot

<p>The data was generated within the research project Constructing AcTive CitizensHip with European Youth: Policies, Practices, Challenges and Solutions (CATHC-EyoU) funded by European Union, Horizon 2020 Programme.&nbsp;</p> <p>The dataset provides the basis for an&nbsp;offshoot article from&nbsp;work package 6 (&ldquo;Representations of EU and youth active EU citizenship in educational contexts&rdquo;),&nbsp;published in Journal of Social Science Education (<a href="http://www.jsse.org/">http://www.jsse.org/</a>).&nbsp;Ten Swedish textbooks for&nbsp;social studies, are examined in terms of content, attention to conceptual understanding and analytical training.&nbsp;</p>

opencc-by-4.0Jun 2018View details →
zenodo40/100

Database of Hokkien Dictionaries and Textbooks

<p>Hokkien (a.k.a. Minnan 閩南話, Southern Min, Taiwanese) is a variety of Chinese spoken in the southern part of Fujian province (China), Taiwan and by a large number of overseas Chinese all over Southeast Asia. Hokkien dictionaries and textbooks have been published since the 16th century in a number of locations and in a variety of languages (Classical Chinese, Dutch, English, Hokkien, Japanese, Latin, Mandarin, Spanish) for purposes such as education for locals, Christian missionary work and colonial administration.</p> <p>In this post I would like to share a database project I created for the &quot;Working with Digital Data for Historians&quot; class taught by Prof. Tara Andrews at Uni Vienna in the autumn semester of 2018/19. The project work is based on my 3-years MA studies at Xiamen University (Fujian prov., China) and is connected to an article of mine (<em>Xiamen at the Crossroads of Sino-Foreign Interaction During the Late Qing and Republican Periods: The Issue of Hokkien Phoneticization)&nbsp;</em>already peer-reviewed and accepted for publication in the journal&nbsp;<em>Crossroads - Studies on the History of Exchange Relations in the East Asian World</em>. The database is an Excel spreadsheet-based SQL database containing 121 titles of Hokkien linguistic works, connected to relevant information (author, place/date of publishing, publisher, language, transcription method, etc.).</p> <p>Hereby, I submit the dump version of the database (a .sql file containing the SQL scheme and the data as well) and a zip collection containing further relevant materials (project description, original spreadsheets, SQL command scheme, .ipynb documentation of converting the Excel spreadsheets into the SQL database using Jupyter Notebook).</p> <p>Since during my research work I focused on the pre-WWII period, data regarding the post-WWII is highly insufficient. Therefore, the database is up for further expansion. (My e-mail address: sebestyen.hompot@outlook.com)</p>

opencc-by-4.0Apr 2019View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record