Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
81
datasets available to search
ShareScore release 0.9.0
Dataset results
81 results for “wood decay”
FIGURES 1–7. Trichomyia stephani nov. spec. 1–6 male, 7 female. 1 in Two new species of Psychodidae (subfamilies Trichomyiinae and Psychodinae) from Germany associated with decaying wood
FIGURES 1–7. Trichomyia stephani nov. spec. 1–6 male, 7 female. 1—basal antennal segments, 2—palpus, 3—wing, 4—tip of abdomen, lateral view, 5–6 male genitalia, ventral view with upright (6) and distally pointing la—lateral arms of aedeagus; da—dorsal apodeme of gonocoxite) 7—abdomen tip lateroventral view. [Scale: 1, 2= 0.1 mm; 3=1 mm; 4, 5, 6= 0.2 mm; 7=0.1 mm].
Data from: Fine root presence and increased phosphorus availability stimulate wood decay in a Central Amazonian rainforest
<p>In the Amazon basin, approximately 60% of rainforest thrives on geologically old and highly weathered soils, thus decomposition represents an important mechanism for recycling nutrients from organic matter. Although dead logs and branches constitute up to 14% of the carbon stored in terrestrial ecosystems, woody debris decomposition and mainly the effect of direct nutrient cycling by plant root interaction is poorly studied and often overlooked in ecosystem carbon and nutrient budgets. Here we monitored the decomposition of five different local woody species covering a range of wood density by conducting a long-term wood decomposition experiment over two years with factorial root presence and phosphorous (P) addition treatments in a Central Amazonian rainforest. We hypothesized that woody debris decomposition is accelerated by colonizing fine roots mining for nutrients, possibly strongly affecting wood debris with lower density and higher nutrient concentration (P). We found that root colonization and P addition separately increased wood decay rates, and although fine root colonization increased when P was added, this did not result in a change in wood decay. Nutrient loss from wood was accelerated by P addition, whereas a root presence effect on nutrient mobilization was only detectable at the end of the experiment. Our results highlight the role of fine roots in priming wood decay, although direct nutrient acquisition by plants seems to only occur in more advanced stages of decomposition. On the other hand, the positive effect of P addition may indicate that microbial nutrient mobilization in woody material is driven mainly by wood stoichiometry rather than priming by root activity.</p>
TABLE 1 in Diversity of wood-decaying fungi in Zixishan area (Hengduan Mountains), Yunnan Province, China
<p><b>TABLE 1.</b> Names, sample numbers and corresponding GenBank accession numbers of the taxa used in this study.</p><table><tbody><tr><th>Species name</th><th>Sample no.</th><th>GenBank Accession No. ITS</th><th>References</th></tr></tbody><tbody><tr><th><i>Aleurodiscus isabellinus</i></th><td>CLZhao 21151</td><td>OM955789</td><td>Present study</td></tr><tr><th><i>A. isabellinus</i></th><td>He 5294</td><td>MH109053</td><td>Tian <i>et al.</i> (2018)</td></tr><tr><th><i>A. mirabilis</i></th><td>CLZhao 6781</td><td>OM955790</td><td>Present study</td></tr><tr><th><i>A. mirabilis</i></th><td>He 3730</td><td>KX306878</td><td>Dai & He (2017)</td></tr><tr><th><i>Antrodia xantha</i></th><td>CLZhao 6685</td><td>OM955795</td><td>Present study</td></tr><tr><th><i>A. xantha</i></th><td>Dai 12984</td><td>MG787578</td><td>Unpublished</td></tr><tr><th><i>Butyrea japonica</i></th><td>CLZhao 7218</td><td>OM955796</td><td>Present study</td></tr><tr><th><i>B. japonica</i></th><td>SFC20170823-29</td><td>MN973797</td><td>Lee <i>et al.</i> (2020)</td></tr><tr><th><i>Byssomerulius corium</i></th><td>CLZhao 6910</td><td>OM955797</td><td>Present study</td></tr><tr><th><i>B. corium</i></th><td>Wu 1207-55</td><td>MZ636932</td><td>Chen <i>et al.</i> (2021)</td></tr><tr><th><i>Ceriporia nanlingensis</i></th><td>CLZhao 7208</td><td>OM955803</td><td>Present study</td></tr><tr><th><i>C. nanlingensis</i></th><td>Dai8173</td><td>JX623942</td><td>Jia <i>et al.</i> (2014)</td></tr><tr><th><i>C. pseudocystidiata</i></th><td>CLZhao 7682</td><td>OM955808</td><td>Present study</td></tr><tr><th><i>C. pseudocystidiata</i></th><td>Cui6878</td><td>JX623943</td><td>Jia <i>et al.</i> (2014)</td></tr><tr><th><i>Ceriporiopsis semisupina</i></th><td>CLZhao 7426</td><td>OM955809</td><td>Present study</td></tr><tr><th><i>Ce. semisupina</i></th><td>Chen 3327</td><td>MZ636937</td><td>Chen <i>et al.</i> (2021)</td></tr><tr><th><i>Cerrena zonata</i></th><td>CLZhao 7676</td><td>OM955819</td><td>Present study</td></tr><tr><th><i>Cer. zonata</i></th><td>Dai7821</td><td>KC485529</td><td>Yuan (2014)</td></tr><tr><th><i>Coltricia crassa</i></th><td>CLZhao 7157</td><td>OM955820</td><td>Present study</td></tr><tr><th><i>C. crassa</i></th><td>Dai 15163</td><td>KU360679</td><td>Bian & Dai (2015)</td></tr><tr><th><i>Crepatura ellipsospora</i></th><td>CLZhao 6851</td><td>OM955821</td><td>Present study</td></tr><tr><th><i>C. ellipsospora</i></th><td>CLZhao 697</td><td>MK343695</td><td>Ma & Zhao (2019)</td></tr><tr><th><i>Crustodontia chrysocreas</i></th><td>CLZhao 21107</td><td>OM955826</td><td>Present study</td></tr><tr><th><i>C. chrysocreas</i></th><td>CBS 125889</td><td>MH864087</td><td>Vu <i>et al.</i> (2019)</td></tr><tr><th><i>Crustomyces subabruptus</i></th><td>CLZhao 21086</td><td>OM955828</td><td>Present study</td></tr><tr><th><i>Cr. subabruptus</i></th><td>K(M):249975</td><td>MZ159685</td><td>Unpublished</td></tr><tr><th><i>Cyanosporus submicroporus</i></th><td>CLZhao 6920</td><td>OM955827</td><td>Present study</td></tr><tr><th><i>C. submicroporus</i></th><td>Cui 18156</td><td>MW182186</td><td>Liu <i>et al.</i> (2022)</td></tr><tr><th><i>Dentipellicula leptodon</i></th><td>CLZhao 6818</td><td>OM955830</td><td>Present study</td></tr><tr><th><i>D. leptodon</i></th><td>CBS 125879</td><td>MH864083</td><td>Vu <i>et al.</i> (2019)</td></tr><tr><th><i>Diplomitoporus flavescens</i></th><td>CLZhao 7009</td><td>OM955844</td><td>Present study</td></tr><tr><th><i>D. flavescens</i></th><td>IBL66</td><td>MZ410695</td><td>Unpublished</td></tr><tr><th><i>Fomitopsis pinicola</i></th><td>CLZhao 7716</td><td>OM955845</td><td>Present study</td></tr><tr><th><i>F. pinicola</i></th><td>Cui 10312</td><td>KR605781</td><td>Han <i>et al.</i> (2016)</td></tr><tr><th><i>Fuscoporia chinensis</i></th><td>CLZhao 21152</td><td>OM955848</td><td>Present study</td></tr><tr><th><i>F. chinensis</i></th><td>Dai 15713</td><td>MN816721</td><td>Chen <i>et al.</i> (2020)</td></tr><tr><th><i>Gloeocystidiellum porosum</i></th><td>CLZhao 6984</td><td>OM955849</td><td>Present study</td></tr><tr><th><i>G. porosum</i></th><td>CBS 189.56</td><td>MH857576</td><td>Vu <i>et al.</i> (2019)</td></tr><tr><th><i>Heterobasidion insulare</i></th><td>CLZhao 6829</td><td>OM955850</td><td>Present study</td></tr><tr><th><i>H. insulare</i></th><td>Dai 13933</td><td>MT146489</td><td>Yuan <i>et al.</i> (2021)</td></tr><tr><th><i>Hydnophanerochaete odontoidea</i></th><td>CLZhao 6785</td><td>OM955750</td><td>Present study</td></tr><tr><th><i>H. odontoidea</i></th><td>CLZhao 4036</td><td>MH784927</td><td>Shen <i>et al.</i> (2018)</td></tr><tr><th><i>Hydnoporia corrugata</i></th><td>CLZhao 7171</td><td>OM955854</td><td>Present study</td></tr><tr><th><i>Hy. corrugata</i></th><td>HHB 19233</td><td>MW740292</td><td>Unpublished</td></tr><tr><th><i>Hy. yasudae</i></th><td>CLZhao 21214</td><td>OM955855</td><td>Present study</td></tr><tr><th><i>Hy. yasudae</i></th><td>Miettinen X2653</td><td>MK514597</td><td>Miettinen <i>et al.</i> (2019)</td></tr><tr><th><i>Hymenochaete cruenta</i></th><td>CLZhao 21195</td><td>OM955856</td><td>Present study</td></tr><tr><th><i>H. cruenta</i></th><td>He 766</td><td>JQ279595</td><td>He & Dai (2012)</td></tr><tr><th><i>H. minor</i></th><td>CLZhao 7197</td><td>OM955857</td><td>Present study</td></tr><tr><th><i>H. minor</i></th><td>He 933</td><td>JQ279555</td><td>He & Dai (2012)</td></tr><tr><th><i>H. rheicolor</i></th><td>CLZhao 6801</td><td>OM955858</td><td>Present study</td></tr><tr><th><i>H. rheicolor</i></th><td>Cui 8317</td><td>JQ279529</td><td>He & Dai (2012)</td></tr><tr><th><i>H. xerantica</i></th><td>CLZhao 7141</td><td>OM955861</td><td>Present study</td></tr><tr><th><i>H. xerantica</i></th><td>Cui 9209</td><td>JQ279519</td><td>He & Dai (2012)</td></tr><tr><th><i>Hyphoderma cremeoalbum</i></th><td>CLZhao 17007</td><td>OM955862</td><td>Present study</td></tr><tr><th><i>H. cremeoalbum</i></th><td>NH 11538</td><td>DQ677492</td><td>Larsson (2007)</td></tr><tr><th><i>H. crystallinum</i></th><td>CLZhao 15841</td><td>MW917165</td><td>Present study</td></tr><tr><th><i>H. crystallinum</i></th><td>CLZhao 18459</td><td>MW917166</td><td>Guan & Zhao (2021a)</td></tr><tr><th><i>H. fissuratum</i></th><td>CLZhao 6731</td><td>MT791331</td><td>Present study</td></tr><tr><th><i>H. fissuratum</i></th><td>CLZhao 6726</td><td>MT791330</td><td>Ma <i>et al.</i> (2021)</td></tr><tr><th><i>H. floccosum</i></th><td>CLZhao 17215</td><td>MW301687</td><td>Present study</td></tr><tr><th><i>H. floccosum</i></th><td>CLZhao 17129</td><td>MW301683</td><td>Guan & Zhao (2021a)</td></tr><tr><th><i>H. membranacea</i></th><td>CLZhao 5844</td><td>MW917167</td><td>Present study</td></tr><tr><th><i>H. membranacea</i></th><td>CLZhao 6971</td><td>MW917168</td><td>Guan & Zhao (2021a)</td></tr><tr><th><i>H. microporoides</i></th><td>CLZhao 8695</td><td>MW917170</td><td>Present study</td></tr><tr><th><i>H. microporoides</i></th><td>CLZhao 6857</td><td>MW917169</td><td>Guan & Zhao (2021b)</td></tr><tr><th><i>H. moniliforme</i></th><td>CLZhao 21162</td><td>OM955863</td><td>Present study</td></tr><tr><th><i>H. moniliforme</i></th><td>Wu 0211-46</td><td>KC928284</td><td>Yurchenko & Wu (2015)</td></tr><tr><th><i>H. mopanshanense</i></th><td>CLZhao 6498</td><td>MT791329</td><td>Present study</td></tr><tr><th><i>H. mopanshanense</i></th><td>CLZhao 6493</td><td>MT791328</td><td>Ma <i>et al.</i> (2021)</td></tr><tr><th><i>H. sinense</i></th><td>CLZhao 7963</td><td>MW301679</td><td>Present study</td></tr><tr><th><i>H. sinense</i></th><td>CLZhao 7981</td><td>MW301680</td><td>Guan & Zhao (2021b)</td></tr><tr><th><i>H. tenuissimum</i></th><td>CLZhao 16210</td><td>MW443050</td><td>Present study</td></tr><tr><th><i>H. tenuissimum</i></th><td>CLZhao 7003</td><td>MW443048</td><td>Guan & Zhao (2021b)</td></tr><tr><th><i>H. transiens</i></th><td>CLZhao 1667</td><td>MT955166</td><td>Present study</td></tr><tr><th><i>H. transiens</i></th><td>NH 12304</td><td>DQ677504</td><td>Larsson (2007)</td></tr><tr><th><i>Hyphodermella zixishanensis</i></th><td>CLZhao 7412</td><td>MZ305282</td><td>Present study</td></tr><tr><th><i>Hy. zixishanensis</i></th><td>CLZhao 7124</td><td>MZ305276</td><td>Wang <i>et al.</i> (2021b)</td></tr><tr><th><i>Hy. aurantiaca</i></th><td>CLZhao 10521</td><td>MW209029</td><td>Present study</td></tr><tr><th><i>Hy. aurantiaca</i></th><td>CLZhao 10500</td><td>MW209025</td><td>Wang & Zhao (2021a)</td></tr><tr><th><i>Hyphodontia tropica</i></th><td>CLZhao 6714</td><td>OM955867</td><td>Present study</td></tr><tr><th><i>Hyp. tropica</i></th><td>CLZhao 6716</td><td>OM955868</td><td>Present study</td></tr><tr><th><i>Leptoporus mollis</i></th><td>CLZhao 7427</td><td>OM955917</td><td>Present study</td></tr><tr><th><i>L. mollis</i></th><td>Dai 21062</td><td>MW377302</td><td>Liu <i>et al.</i> (2023)</td></tr><tr><th><i>Lyomyces cremeus</i></th><td>CLZhao 7281</td><td>OM955918</td><td>Present study</td></tr><tr><th><i>L. cremeus</i></th><td>CLZhao 7244</td><td>OM955921</td><td>Present study</td></tr><tr><th><i>L. cremeus</i></th><td>CLZhao 7285</td><td>OM955919</td><td>Present study</td></tr><tr><th><i>L. cremeus</i></th><td>CLZhao 2812</td><td>MN945973</td><td>Zhao & Cui (2013)</td></tr><tr><th><i>L. cremeus</i></th><td>CLZhao 7294</td><td>OM955920</td><td>Present study</td></tr><tr><th><i>L. cremeus</i></th><td>CLZhao 4138</td><td>MN945974</td><td>Zhao & Cui (2013)</td></tr><tr><th><i>L. crustosus</i></th><td>CLZhao 6897</td><td>OM955922</td><td>Present study</td></tr><tr><th><i>L. crustosus</i></th><td>CLZhao 7274</td><td>OM955923</td><td>Present study</td></tr><tr><th><i>L. orientalis</i></th><td>CLZhao 7132</td><td>OM955926</td><td>Present study</td></tr><tr><th><i>L. orientalis</i></th><td>KAS-GEL 3376</td><td>DQ340325</td><td>Yurchenko <i>et al.</i> (2017)</td></tr><tr><th><i>L. vietnamensis</i></th><td>CLZhao 7100</td><td>OM955927</td><td>Present study</td></tr><tr><th><i>L. vietnamensis</i></th><td>TNM F9073</td><td>JX175044</td><td>Yurchenko & Wu (2015)</td></tr><tr><th><i>Megasporia major</i></th><td>CLZhao 7064</td><td>OM955928</td><td>Present study</td></tr><tr><th><i>M. major</i></th><td>GC 1407-21</td><td>KY688205</td><td>Chen <i>et al.</i> (2018)</td></tr><tr><th><i>Peniophora versiformis</i></th><td>CLZhao 7051</td><td>OM955931</td><td>Present study</td></tr><tr><th><i>P. versiformis</i></th><td>CBS 361.54</td><td>MH857362</td><td>Vu <i>et al.</i> (2019)</td></tr><tr><th><i>Peniophorella fissurata</i></th><td>CLZhao 7290</td><td>OM955718</td><td>Present study</td></tr><tr><th><i>Pe. fissurata</i></th><td>CLZhao 9421</td><td>MN864260</td><td>Guan <i>et al.</i> (2020)</td></tr><tr><th><i>Pe. praetermissa</i></th><td>CLZhao 21158</td><td>OM955719</td><td>Present study</td></tr><tr><th><i>Pe. praetermissa</i></th><td>NH 7827</td><td>DQ647460</td><td>Hallenberg <i>et al.</i> (2007)</td></tr><tr><th><i>Pe. pubera</i></th><td>CLZhao 7509</td><td>OM955722</td><td>Present study</td></tr><tr><th><i>Pe. pubera</i></th><td>NH 10512</td><td>DQ647505</td><td>Hallenberg <i>et al.</i> (2007)</td></tr><tr><th><i>Pe. rude</i></th><td>CLZhao 7142</td><td>OM955723</td><td>Present study</td></tr><tr><th><i>Pe. rude</i></th><td>Wu 0104-3</td><td>DQ647495</td><td>Hallenberg <i>et al.</i> (2007)</td></tr><tr><th><i>Pe. subpraetermissa</i></th><td>CLZhao 6882</td><td>OM955728</td><td>Present study</td></tr><tr><th><i>Pe. subpraetermissa</i></th><td>Wu 950627</td><td>DQ647493</td><td>Hallenberg <i>et al.</i> (2007)</td></tr><tr><th><i>Phanerochaete concrescens</i></th><td>CLZhao 7002</td><td>OM955732</td><td>Present study</td></tr><tr><th><i>P. concrescens</i></th><td>He 4657</td><td>MT235662</td><td>Unpublished</td></tr><tr><th><i>P. pruinosa</i></th><td>CLZhao 7713</td><td>MZ435347</td><td>Present study</td></tr><tr><th><i>P. pruinosa</i></th><td>CLZhao 7712</td><td>MZ435346</td><td>Wang & Zhao (2021b)</td></tr><tr><th><i>P. rhizomorpha</i></th><td>CLZhao 10470</td><td>MZ435348</td><td>Present study</td></tr><tr><th><i>P. rhizomorpha</i></th><td>CLZhao 10477</td><td>MZ435349</td><td>Wang & Zhao (2021b)</td></tr><tr><th><i>P. sordida</i></th><td>CLZhao 7486</td><td>OM955733</td><td>Present study</td></tr><tr><th><i>P. sordida</i></th><td>He 5400</td><td>MT235676</td><td>Unpublished</td></tr><tr><th><i>Phlebia acerina</i></th><td>CLZhao 7664</td><td>OM955744</td><td>Present study</td></tr><tr><th><i>P. acerina</i></th><td>HHB 11146</td><td>KP135372</td><td>Floudas & Hibbett (2015)</td></tr><tr><th><i>Phlebiopsis crassa</i></th><td>CLZhao 7130</td><td>OM955764</td><td>Present study</td></tr><tr><th><i>Ph. crassa</i></th><td>FP 102496</td><td>AY219341</td><td>De Koker <i>et al.</i> (2003)</td></tr><tr><th><i>Ph. yunnanensis</i></th><td>CLZhao 7367</td><td>OM955788</td><td>Present study</td></tr><tr><th><i>Ph. yunnanensis</i></th><td>CLZhao 3900</td><td>MH744141</td><td>Zhao <i>et al.</i> (2019)</td></tr><tr><th><i>Porodaedalea chinensis</i></th><td>CLZhao 7487</td><td>OM955768</td><td>Present study</td></tr><tr><th><i>P. chinensis</i></th><td>Dai 16864</td><td>KX852282</td><td>Dai <i>et al.</i> (2017)</td></tr><tr><th><i>Postia caesia</i></th><td>CLZhao 6904</td><td>OM955769</td><td>Present study</td></tr><tr><th><i>Po. caesia</i></th><td>K(M) 31967</td><td>AY599567</td><td>Yao <i>et al.</i> (2005)</td></tr><tr><th><i>Scytinostroma phaeosarcum</i></th><td>CLZhao 21302</td><td>OM955775</td><td>Present study</td></tr><tr><th><i>S. phaeosarcum</i></th><td>CBS 728.81</td><td>MH861463</td><td>Vu <i>et al.</i> (2019)</td></tr><tr><th><i>Skeletocutis nivea</i></th><td>CLZhao 7034</td><td>OM955776</td><td>Present study</td></tr><tr><th><i>S. nivea</i></th><td>FD-5</td><td>KP135331</td><td>Floudas & Hibbett (2015)</td></tr><tr><th><i>S. pseudo-odora</i></th><td>CLZhao 6938</td><td>OM955777</td><td>Present study</td></tr><tr><th><i>S. pseudo-odora</i></th><td>Dai 16527</td><td>KY245961</td><td>Fan <i>et al.</i> (2017)</td></tr><tr><th><i>Steccherinum nitidum</i></th><td>CLZhao 7198</td><td>MZ713646</td><td>Present study</td></tr><tr><th><i>S. nitidum</i></th><td>KHL 11903</td><td>JN710560</td><td>Miettinen <i>et al.</i> (2012)</td></tr><tr><th><i>Stereum hirsutum</i></th><td>CLZhao 7420</td><td>OM955779</td><td>Present study</td></tr><tr><th><i>St. hirsutum</i></th><td>CBS 108532</td><td>MH862810</td><td>Vu <i>et al.</i> (2019)</td></tr><tr><th><i>St. sanguinolentum</i></th><td>CLZhao 6856</td><td>OM955780</td><td>Present study</td></tr><tr><th><i>S. sanguinolentum</i></th><td>CLZhao 7581</td><td>OM955786</td><td>Present study</td></tr><tr><th><i>Tyromyces kmetii</i></th><td>CLZhao 7305</td><td>OM955787</td><td>Present study</td></tr><tr><th><i>T. kmetii</i></th><td>Dai 12403</td><td>KF698747</td><td>Unpublished</td></tr></tbody></table><p>......continued on the next page</p><p>......continued on the next page</p>
Sonic tomography reveals the relationship between the internal wood decay and beetle communities
<p>The dataset includes two files:</p> <p>1) List of beetle species captured in live and dead trees, including trophic guilds of each species.</p> <p>2) Supporting data, including:</p> <p> -Table S1 (Summary of abundance and richness of beetle species captured in dead and live trees. Species are categorized into trophic guilds)</p> <p> -Table S2<strong>. </strong>Averaged coefficients of the best-supported GLMM</p> <p> -Fig. S1. Coefficients of quantile regressions</p>
FIGURE 2 in Description of Metarhabditis giennensis sp. n. (Nematoda, Rhabditida, Rhabditidae) from decaying wood of a riverbank forest in the southern Iberian Peninsula
FIGURE 2. Metarhabditis giennensis sp. n. (LM). A: Neck region (arrow indicates hemizonid). B: Female lip region. C: Female stoma in dorso-ventral view (white arrows pointing at the gymnostomatal denticles, black arrows indicate metastegostomatal denticles). D: Male stoma (arrows indicate metastegostomatal denticles). E: Gymnostomatal denticles (arrows). F: Excretory pore. G: Uterine eggs. H: Female posterior end. I, J: Male posterior end (figures indicating the genital papillae, ph = phasmid).
FIGURE 1 in Description of Metarhabditis giennensis sp. n. (Nematoda, Rhabditida, Rhabditidae) from decaying wood of a riverbank forest in the southern Iberian Peninsula
FIGURE 1. Metarhabditis giennensis sp. n. (line drawing). A: Neck region. B: Stoma in lateral median view. C: Stoma in dorsoventral median view. D: Lip region in dorsal surface view. E: Female genital system. F, I: Male posterior end in lateral and ventral views, respectively. G: Entire female. H: Entire male. J: Female caudal region.
FIGURE 4 in Description of Metarhabditis giennensis sp. n. (Nematoda, Rhabditida, Rhabditidae) from decaying wood of a riverbank forest in the southern Iberian Peninsula
FIGURE 4. Lip region, male and female posterior ends of Metarhabditis species. [Based on the original illustrations, not to scale.]
FIGURE 3 in Description of Metarhabditis giennensis sp. n. (Nematoda, Rhabditida, Rhabditidae) from decaying wood of a riverbank forest in the southern Iberian Peninsula
FIGURE 3. Metarhabditis giennensis sp. n. (scanning electron microscopy, male). A, B: Lip region in left lateral and frontal views, respectively (arrows indicate amphids). C: Excretory pore (arrow). D: Lateral field (arrows indicate longitudinal incisures). E, H: Gymnostomatal denticles (arrows) at dorsal and subventral rhabdia, respectively. F, G: Male posterior end in right lateral and ventral views, respectively numbers indicating the genital papillae, ph = phasmid). I: Cloacal region (arrow indicates middle papilla).
FIGURE 3 in The wood-decaying fungal diversity unveiled by morphology and phylogeny in Ailaoshan Mountain, Yunnan, China
FIGURE 3. Fruiting bodies in situ of (A) Abundisporus quercicola (CLZhao 4895) (B) Alloexidiopsis yunnanensis (CLZhao 9200) (C) Coltricia weii (CLZhao 4773) (D) Daedaleopsis confragosa (CLZhao 4813) (E) Fuscoporia pulviniformis (CLZhao 8327) (F) Hymenochaete rheicolor (CLZhao 4829) (G) Hymenochaete xerantica (CLZhao 8397) (H) Laetiporus ailaoshanensis (CLZhao 3913) (I) Lenzites betulinus (CLZhao 3825) (J) Lyomyces macrosporus (CLZhao 8605) (K) Megasporoporiella pseudocavernulosa (CLZhao 2803) (L) Microporus vernicipes (CLZhao 5510) in the Ailaoshan Mountains. Bars: (A), (B), (E) = 2 cm; (C), (F), (G), (H), (I), (J), (K), (L) = 1 cm; (D) = 3 cm.
FIGURE 2 in The wood-decaying fungal diversity unveiled by morphology and phylogeny in Ailaoshan Mountain, Yunnan, China
FIGURE 2. Taxonomic composition of 103 corticioid fungal species at the order level in the Ailaoshan Mountains.
FIGURE 1 in The wood-decaying fungal diversity unveiled by morphology and phylogeny in Ailaoshan Mountain, Yunnan, China
FIGURE 1. Maximum parsimony strict consensus tree illustrating the phylogeny of 103 species in Agaricomycetes based on ITS sequences. Branches are labelled with a maximum likelihood boot-strap>70%, a parsimony bootstrap>50%, and Bayesian posterior probabilities>0.97, respectively. The sequences of collections labelled in black are downloaded from GenBank, while those in purple are generated in this study.
FIGURE 2 in USING Next-Generation Sequencing (NGS) TO UNCOVER DIVERSITY OF WOOD-DECAYING FUNGI IN NEOTROPICAL ATLANTIC FORESTS
FIGURE 2. Relative abundances of reads of fungal genera per study area and metabarcode using 95% sequence similarity with reference sequences in the UNITE database as surrogate for traditional taxonomic generic concepts.
FIGURE 1 in USING Next-Generation Sequencing (NGS) TO UNCOVER DIVERSITY OF WOOD-DECAYING FUNGI IN NEOTROPICAL ATLANTIC FORESTS
FIGURE 1. Genera richness at the levels of phylum, class and order per study area and metabarcode using 95% sequence similarity with reference sequences in the UNITE database as surrogate for traditional taxonomic generic concepts.
FIGURE. 3 in Two novel species of Paradictyoarthrinium from decaying wood
FIGURE. 3. Paradictyoarthrinium hydei (MFLU 17-2652, holotype) a, b Colonies on wood. c Germinating conidium. d–h Conidiophores and conidia. i–m Conidia. Scale bars: c–g, i–m = 10 μm, h = 20 μm.
FIGURE. 2 in Two novel species of Paradictyoarthrinium from decaying wood
FIGURE. 2 Paradictyoarthrinium aquatica. (HKAS 92873, holotype) a, b Colonies on wood. c, d, j, k Conidia in chians. e, h, i Conidia with conidiophores. f, g Immaturated conidia. l Germinating conidium. m, n Colonies on PDA from surface and reverse. Scale bars: c–e = 20 μm, f–k = 15 μm.
FIGURE 1 in Two novel species of Paradictyoarthrinium from decaying wood
FIGURE 1. RAxML tree based on a combined LSU, ITS and RPB2 sequence dataset. Bayesian posterior probabilities (PP) above 0.95 and ML bootstrap proportion (BP) greater than 75% are presented at the nodes as BP/PP. Branches with more than 75% bootstrap (ML/ MP) and 0.95 (PP) are thickened. The original isolate numbers are noted after the species names. The new taxa isolates are in bold. The scale bar shows 0.05 changes and the tree is rooted to Melanomma pulvis-pyrius (CBS 124080).
Metabolic responses of two pioneer wood decay fungi to diurnally cycling temperature
<p>This dataset contains pre-processed untargeted GC-MS metabolomics and direct shotgun proteomics from a microcosm woodblock experiment described in the paper "Rawlings et al (2021) Metabolic responses of two pioneer wood decay fungi to diurnally cycling temperature. Ecology."</p> <p>The experiment investigates the effect of diurnal cycling of temperature on the metabolism of two wood decay species, <em>Mucidula mucida</em> and <em>Exidia glandulosa</em>. We colonised beech woodblocks with the two species (separate microcosms) and exposed them to either a diurnally cycling (mean 15 ± 10°C) or constant (15°C) temperature, in a fully factorial design. After 8 weeks we extracted the full complement of metabolites and proteins in the wood to examine the extent to which the abundances of metabolic products were altered.</p> <p>The main results of the experiment were that products linked to lignin breakdown, the citric acid cycle, pentose phosphate pathway, carbohydrate metabolism, fatty acid metabolism and protein biosynthesis and turnover were under-enriched in fluctuating, compared to stable temperatures, in the generalist <i>M. mucida</i>. Conversely <i>E. glandulosa</i> showed little differential response to the experimental treatments which may be linked with its preference for habitats exhibiting abiotic stress. </p>
FIGURE 3 in Additions to Distoseptispora (Distoseptisporaceae) associated with submerged decaying wood in China
FIGURE 3. Distoseptispora yunnanensis (MFLU 20-0625, holotype) a Colonies on natural substrate. b–e Conidiophores with conidia. f–i Conidiogenous cells. j–l Conidia. m Germinating conidia. n, o Culture on PDA from above and reverse (14d). Scale bars: b = 80 µm; c–e = 60 µm; f, g = 30 µm; h–k, m = 40 µm; l = 50 µm.
FIGURE 2 in Additions to Distoseptispora (Distoseptisporaceae) associated with submerged decaying wood in China
FIGURE 2. Distoseptispora euseptata (HKAS 111958, holotype) a Colonies on natural substrate. b–d Conidiophores with conidia. e–g Conidia. h Germinating conidium. i, j Culture on PDA from above and reverse (14d). Scale bars: b = 30 µm; c–d = 40 µm; e–h = 20 µm.
FIGURE 1 in Additions to Distoseptispora (Distoseptisporaceae) associated with submerged decaying wood in China
FIGURE 1. Phylogram generated from maximum likelihood analysis (ML) based on combined LSU, ITS, tef1-α and rpb2 sequence dataset. Bootstrap support values for ML, MP greater than 75% and Bayesian posterior probabilities greater than 0.95 PP are given above the nodes as MLBS/MPBS/PP. Branches with 100% ML BS, 100% MP BS and 1.00 PP are thickened. The tree is rooted to Pseudoplagiostoma variabile (CBS 113067) and Valsella salicis (BPI 748461). Ex-type isolates are given in bold and newly generated isolates in this study are in red.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.