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Fig. S7 in A lost world in Wallacea: Description of a montane archipelagic avifauna (supplement)
Fig. S7. Maximum-likelihood tree of 24 Myzomela species using NADH dehydrogenase subunit 2 (ND2). Branch support ≥ 90 is shown in the following order: maximum likelihood, maximum parsimony, neighbor-joining. Insignificant branch support values not provided. Illustrations modified from Eaton et al. (57). "Myzomela sp." refers to the newly described Myzomela wahe from Taliabu. Uncorrected pairwise ND2 divergences are provided between M. wahe and its two closest relatives (M. elisabethae and M. chloroptera).
Fig. S4 in A lost world in Wallacea: Description of a montane archipelagic avifauna (supplement)
Fig. S4. Principal component analysis of 11 bioacoustic parameters across four species of Locustella grasshopper-warblers. Ellipses represent 95% confidence intervals of the principal component (PC) scores for each taxon. The percentage of total variance of each PC is given in parentheses.
Video supplement: Factors determining the natural fresh-salt groundwater distribution in deltas
<p>This presents the 3D renderings of the groundwater salinity of all the trajectories in our global sensitivity analysis of a three-dimensional, variable-density groundwater model of a synthetic delta with complex paleo-hydrological boundary conditions</p> <p>In total there are 10 trajectories, each consisting of 24 simulations. So in total there are 240 simulations. </p> <p>The videos show the development of the fresh-salt groundwater distribution over 45 ka for trajectories 1-10, viewed from the sea-side. Each panel is one step, at the top left it is which input is altered in which direction. A plus sign means an increase in the input, a minus sign a decrease. The blue-yellow-red color scale indicates salinity. The shaded areas the clay layers, the white color the location of the river boundaries and the black color the location of sea cells. Note that the vertical of each distribution with the following is stretched by a factor <span class="math-tex">\(4000/\log(\Delta z)\)</span>, since the system thickness varied logarithmically.</p> <p> </p>
Supplemental Material of Relationships between Economic, Legal, Social, and Global Risks with the Success in International Construction Projects at Caribbean Islands with British Influence
<p>Suplemental Material consisting on: 1. Instrument for collecting data and, 2. Survey results of the study.</p>
Supplement of gmd-2020-31
<p>Supplement of the GMD manuscript gmd-2020-31</p> <p><strong>The Latest Improvements in SURFEX v8.0 of the Safran-Isba-Modcou Hydrometeorological Model over France</strong></p>
Supplement of manuscript 521330
<p>This folder contains analysis data from the study submitted as manuscript (Manuscript ID 521330):</p> <p>TITLE:</p> <p>Comparative metabarcoding and metatranscriptomic analysis of microeukaryotes within coastal surface waters of West Greenland and Northwest Iceland</p> <p>AUTHORS:</p> <p>Stephanie Elferink, <a href="mailto:Stephanie.westphal@awi.de"> Stephanie.westphal@awi.de</a>, Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research<sup> </sup> </p> <p>Sylke Wohlrab, <a href="mailto:Sylke.wohlrab@awi.de"> Sylke.wohlrab@awi.de</a>, Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research, and Helmholtz Institute for Functional Marine Biodiversity<sup> </sup></p> <p>Stefan Neuhaus, <a href="mailto:Stephan.neuhaus@awi.de">Stephan.neuhaus@awi.de</a>, Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research<sup> </sup> </p> <p>Allan Cembella, <a href="mailto:Allan.Cembella@awi.de"> Allan.Cembella@awi.de</a>, Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research<sup> </sup> </p> <p>Lars Harms, <a href="mailto:Lars.Harms@awi.de"> Lars.Harms@awi.de</a>, Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research, and Helmholtz Institute for Functional Marine Biodiversity<sup> </sup></p> <p>Uwe John, <a href="mailto:Uwe.John@awi.de"> Uwe.John@awi.de</a>, Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research, and Helmholtz Institute for Functional Marine Biodiversity</p> <p>JOURNAL:</p> <p>Frontiers in Marine Science, section Marine Molecular Biology and Ecology</p> <p>MS-ID:</p> <p>521330</p> <p>HOWTO:</p> <p>Sequences identified as Alveloates or Stramenopiles (description in manuscript) had been were classified more accurately by PhyloAssigner version 6.166 (https://github.com/jungbluth/phyloassigner, Vergin et al., 2013, DOI:10.1038/ismej.2013.32) with a phylogenetic placement onto reference trees based on 18S/28S concatenated alignments, according to Elferink et al. 2017 (DOI: 10.1016/j.dsr.2016.11.002).</p> <p>CONTENT:</p> <p>reference databases:</p> <p>- Alveolata_SSU-LSU-concat_310715_636.phyloassignerdb</p> <p>- Stramenopiles_SSU_LSU_concat_030815_1777.phyloassignerdb</p> <p>query sequence files:</p> <p>- Alveolata_seqtab_SIGN_dada2.fasta</p> <p>- Alveolata_seqtab_SIGN_dada2.fasta</p> <p>created out put folder including the taxonomic annotation:</p> <p>- Alveolata_seqtab_SIGN_dada2.place.out</p> <p>- Stramenopiles_seqtab_SIGN_dada2.place.out</p> <p>text file containing the used commands:</p> <p>- commands</p> <p> </p> <p> </p> <p> </p> <p> </p>
Data_supplemental figure 7_Impact of 17β‑HSD12, the 3‑ketoacyl‑CoA reductase of long‑chain fatty acid synthesis, on breast cancer cell proliferation and migration
<p>Data of supplemental figure 7 from Impact of 17β‑HSD12, the 3‑ketoacyl‑CoA reductase of long‑chain fatty acid synthesis, on breast cancer cell proliferation and migration</p> <p>Dataset (doi: 10.1007/s00018-019-03227-w) contains the original figure as TIF-format (10.1194_jlr.M092908_Fig. S7). Corresponding raw data obtained from xCELLigence provided as six files in CSV format (31003A-179400_date_examiner_17BHSD12_9_3-4_1-3). All further experiment related information and subsequent data analysis provided as a) two meta-data-file 31003A-179400_ date_examiner_17BHSD12_9_3-4_M_1) as TXT format.</p>
Data_supplemental figure 3_Impact of 17β‑HSD12, the 3‑ketoacyl‑CoA reductase of long‑chain fatty acid synthesis, on breast cancer cell proliferation and migration
<p>Data of supplemental figure 3 from Impact of 17β‑HSD12, the 3‑ketoacyl‑CoA reductase of long‑chain fatty acid synthesis, on breast cancer cell proliferation and migration</p> <p>Dataset (doi: 10.1007/s00018-019-03227-w) contains the original figure as TIF-format (10.1194_jlr.M092908_Fig. S3). Corresponding raw data from a) western blot and densitometry provided as 11 files in CSV format (31003A-179400_date_examiner_17BHSD12_2_18-20_1-3) b) cellomics HTC array scan analysis provided as four files in CSV format (31003A-179400_Date_examiner_17BHSD12_8_13_1-4). All further experiment related information protocols and subsequent data analysis provided as meta-data-files (31003A-179400_date_examiner_17BHSD12_2/8_dataset_M_1) as TXT format and (31003A-179400_date_examiner_17BHSD12_2_dataset_M_2-3) as PNG format.</p>
Data_supplemental figure 6_Impact of 17β‑HSD12, the 3‑ketoacyl‑CoA reductase of long‑chain fatty acid synthesis, on breast cancer cell proliferation and migration
<p>Data of supplemental figure 6 from Impact of 17β‑HSD12, the 3‑ketoacyl‑CoA reductase of long‑chain fatty acid synthesis, on breast cancer cell proliferation and migration</p> <p>Dataset (doi: 10.1007/s00018-019-03227-w) contains the original figure as TIF-format (10.1194_jlr.M092908_Fig. S6). Corresponding raw data from a-c) cellomics HTC array scan analysis provided as 19 files in CSV format (31003A-179400_Date_examiner_17BHSD12_8_14-17_1-5), d) western blot and densitometry provided as five files in CSV format (31003A-179400_date_examiner_17BHSD12_2_21_1-5). All further experiment related information protocols and subsequent data analysis provided as meta-data-files (31003A-179400_date_examiner_17BHSD12_2/8_dataset_M_1) as TXT format and (31003A-179400_date_examiner_17BHSD12_2_dataset_M_2-3) as PNG format.</p>
Data_supplemental figure 10_Impact of 17β‑HSD12, the 3‑ketoacyl‑CoA reductase of long‑chain fatty acid synthesis, on breast cancer cell proliferation and migration
<p>Data of supplemental figure 10 from Impact of 17β‑HSD12, the 3‑ketoacyl‑CoA reductase of long‑chain fatty acid synthesis, on breast cancer cell proliferation and migration</p> <p>Dataset (doi: 10.1007/s00018-019-03227-w) contains the original figure as TIF-format (10.1194_jlr.M092908_Fig. S10). Corresponding raw data obtained from a/b) western blot and densitometry provided as 20 files in CSV format (31003A-179400_date_examiner_17BHSD12_2_27-30_1-5), c) mRNA content analyzed by RT-PCR provided as 10 files in CSV format (31003A-179400_date_examiner_17BHSD12_1_11-12_1-6). d) RT-PCR provided as 10 files in CSV format (31003A-179400_date_examiner_17BHSD12_1_13_1-4). All further experiment related information protocols and subsequent data analysis provided as meta-data-files (31003A-179400_date_examiner_17BHSD12_1/2_dataset_M_1) as TXT format and (31003A-179400_date_examiner_17BHSD12_2_dataset_M_2-3) as PNG format.</p>
Data_supplemental figure 9_Impact of 17β‑HSD12, the 3‑ketoacyl‑CoA reductase of long‑chain fatty acid synthesis, on breast cancer cell proliferation and migration
<p>Data of supplemental figure 9 from Impact of 17β‑HSD12, the 3‑ketoacyl‑CoA reductase of long‑chain fatty acid synthesis, on breast cancer cell proliferation and migration</p> <p>Dataset (doi: 10.1007/s00018-019-03227-w) contains the original figure as TIF-format (10.1194_jlr.M092908_Fig. S9). Corresponding raw data obtained from a) western blot and densitometry provided as four files in CSV format (31003A-179400_date_examiner_17BHSD12_2_23_1-5); b) Cellomics HTC array scan analysis provided as eight files in CSV format (31003A-179400_Date_examiner_17BHSD12_8_19-20_1-5); c) western blot and densitometry provided as four files in CSV format (31003A-179400_date_examiner_17BHSD12_2_26_1-3), d) mRNA content analyzed by RT-PCR provided as 10 files in CSV format (31003A-179400_date_examiner_17BHSD12_1_9-10_1-6), e) western blot and densitometry provided as four files in CSV format (31003A-179400_date_examiner_17BHSD12_2_25_1-3), f) western blot and densitometry provided as four files in CSV format (31003A-179400_date_examiner_17BHSD12_2_24_1-3) All further experiment related information protocols and subsequent data analysis provided as meta-data-files (31003A-179400_date_examiner_17BHSD12_1/2/8_dataset_M_1) as TXT format and (31003A-179400_date_examiner_17BHSD12_2_dataset_M_2-3) as PNG format.</p>
Data_supplemental figure 8_Impact of 17β‑HSD12, the 3‑ketoacyl‑CoA reductase of long‑chain fatty acid synthesis, on breast cancer cell proliferation and migration
<p>Data of supplemental figure 8 from Impact of 17β‑HSD12, the 3‑ketoacyl‑CoA reductase of long‑chain fatty acid synthesis, on breast cancer cell proliferation and migration</p> <p>Dataset (doi: 10.1007/s00018-019-03227-w) contains the original figure as TIF-format (10.1194_jlr.M092908_Fig. S8). Corresponding raw data obtained from a) cellomics HTC array scan analysis provided as five files in CSV format (31003A-179400_Date_examiner_17BHSD12_8_18_1-5); b) western blot and densitometry provided as four files in CSV format (31003A-179400_date_examiner_17BHSD12_2_22_1-4), investigation of migration on xCELLigence provided as four (31003A-179400_date_examiner_17BHSD12_9_5_1) files in CSV format. All further experiment related information protocols and subsequent data analysis provided as meta-data-files (31003A-179400_date_examiner_17BHSD12_2/8/9_dataset_M_1) as TXT format and (31003A-179400_date_examiner_17BHSD12_2_dataset_M_2-3) as PNG format.</p>
Data_supplemental figure 5_Impact of 17β‑HSD12, the 3‑ketoacyl‑CoA reductase of long‑chain fatty acid synthesis, on breast cancer cell proliferation and migration
<p>Data of supplemental figure 5 from Impact of 17β‑HSD12, the 3‑ketoacyl‑CoA reductase of long‑chain fatty acid synthesis, on breast cancer cell proliferation and migration</p> <p>Dataset (doi: 10.1007/s00018-019-03227-w) contains the original figure as TIF-format (10.1194_jlr.M092908_Fig. S5). Corresponding raw data from immunofluorescence measurements provided as three files (31003A-179400_20190528_MT, PST, ADU_17BHSD12_13_2_1-3) in png format. All further experiment related information protocols and subsequent data analysis provided as meta-data-file (31003A-179400_date_examiner_17BHSD12_13_2_M_1) as TXT format.</p>
Data_supplemental figure 1_Impact of 17β‑HSD12, the 3‑ketoacyl‑CoA reductase of long‑chain fatty acid synthesis, on breast cancer cell proliferation and migration
<p>Data of supplemental figure 1 from Impact of 17β‑HSD12, the 3‑ketoacyl‑CoA reductase of long‑chain fatty acid synthesis, on breast cancer cell proliferation and migration</p> <p>Dataset (doi: 10.1007/s00018-019-03227-w) contains the original figure as TIF-format (10.1194_jlr.M092908_Fig. S1). (31003A-179400_date_examiner_17BHSD12_2_14-17) PNG format. All further experiment related information protocols as meta-data-files (31003A-179400_date_examiner_17BHSD12_2_dataset_M_1) as TXT format.</p>
Data_supplemental figure 4_Impact of 17β‑HSD12, the 3‑ketoacyl‑CoA reductase of long‑chain fatty acid synthesis, on breast cancer cell proliferation and migration
<p>Data of supplemental figure 4 from Impact of 17β‑HSD12, the 3‑ketoacyl‑CoA reductase of long‑chain fatty acid synthesis, on breast cancer cell proliferation and migration</p> <p>Dataset (doi: 10.1007/s00018-019-03227-w) contains the original figure as TIF-format (10.1194_jlr.M092908_Fig. S4). Corresponding raw data from immunofluorescence measurements provided as three files (31003A-179400_date_examiner_17BHSD12_13_1_1-3) in png format. All further experiment related information protocols and subsequent data analysis provided as meta-data-file (31003A-179400_date_examiner_17BHSD12_13_1_M_1) as TXT format.</p>
Data_supplemental Figure 4_11β-Hydroxysteroid dehydrogenases control access of 7β,27-dihydroxycholesterol to retinoid-related orphan receptor γ
<p>Data of supplemental figure 4 from 11β-Hydroxysteroid dehydrogenases control access of 7β,27-dihydroxycholesterol to retinoid-related orphan receptor γ</p> <p>Dataset (doi:10.1194/jlr.M092908) contains the original figure as PNG-format (10.1194_jlr.M092908_Fig. S4). Corresponding raw data obtained from luminescence analysis provided as six files in CSV format (31003A-179400_DATE_SK_KB_27Oxysterol_18_3-4_1-3). All further experiment related information and subsequent data analysis provided as meta-data-file (31003A-179400_DATE_SK_KB_27Oxysterol_18_3-4_M) as TXT format.</p>
Data_supplemental Figure 2_11β-Hydroxysteroid dehydrogenases control access of 7β,27-dihydroxycholesterol to retinoid-related orphan receptor γ
<p>Data of supplemental figure 2 from 11β-Hydroxysteroid dehydrogenases control access of 7β,27-dihydroxycholesterol to retinoid-related orphan receptor γ</p> <p>Dataset (doi:10.1194/jlr.M092908) contains the original figure as PNG format (10.1194_jlr.M092908_Fig. S2). All further experiment related information and subsequent data analysis provided as two meta-data-files: (31003A-179400_DATE_SK_KB_27Oxysterol_4_5_M_1-2) as TXT format and PDF-Format.</p>
Data_supplemental Figure 1_11β-Hydroxysteroid dehydrogenases control access of 7β,27-dihydroxycholesterol to retinoid-related orphan receptor γ
<p>Data of supplemental figure 1 from 11β-Hydroxysteroid dehydrogenases control access of 7β,27-dihydroxycholesterol to retinoid-related orphan receptor γ</p> <p>Dataset (doi:10.1194/jlr.M092908) contains the original figure as TIF-format (10.1194_jlr.M092908_Fig. S1). All further experiment related information and subsequent data analysis provided as two meta-data-files (31003A-179400_DATE_KB_27Oxysterol_4_4_M_1-2) as TXT format and PDF format.</p>
Data_supplemental figure 2_Enzymatic interconversion of the oxysterols 7β,25 dihydroxycholesterol and 7-keto,25-hydroxycholesterol by 11β-hydroxysteroid dehydrogenase type 1 and 2
<p>Data of supplemental figure 2 from Enzymatic interconversion of the oxysterols 7β,25 dihydroxycholesterol and 7-keto,25-hydroxycholesterol by 11β-hydroxysteroid dehydrogenase type 1 and 2</p> <p>Dataset (doi:<a href="https://doi.org/10.1016/j.jsbmb.2019.03.011">10.1016/j.jsbmb.2019.03.011</a>) contains the original figure as PNG format (<a href="https://doi.org/10.1016/j.jsbmb.2019.03.011">10.1016/j.jsbmb.2019.03.011</a>_Fig. S2). Data obtained from LC-MS/MS measurements subsequent data analysis (31003A-179400_date_name_25Oxysterol_4_8_1-3) provided as three CSV file and meta-data-files (31003A-179400_date_name_25Oxysterol_4_8_M_1-2) as TXT and PDF format.</p>
Data_supplemental table 1_Enzymatic interconversion of the oxysterols 7β,25 dihydroxycholesterol and 7-keto,25-hydroxycholesterol by 11β-hydroxysteroid dehydrogenase type 1 and 2
<p>Data of supplemental table 1 from Enzymatic interconversion of the oxysterols 7β,25 dihydroxycholesterol and 7-keto,25-hydroxycholesterol by 11β-hydroxysteroid dehydrogenase type 1 and 2</p> <p>Dataset (doi:<a href="https://doi.org/10.1016/j.jsbmb.2019.03.011">10.1016/j.jsbmb.2019.03.011</a>) contains the original table as PNG format. Corresponding data for RT-PCR analysis provided as two meta-data-files (31003A-179400_date_name_25Oxysterol_3_1_M_1-2) as TXT and PDF format.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.