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384 results for “Data Transfers”
Soil and meteorological data, and finite element simulation framework for heat transfer through shrubs in winter near Lautaret pass, French Alps
<p>The data allow the calculation using finite element modeling of heat transfer through shrub branches and snow between the atmosphere and the soil. The shrubs are green alders (Alnus viridis). The site where they are found is called Alnus-Nivus (45.034750°N, 6.413630°E, 2034 m asl) near Col du Lautaret, French Alps. The soil data consist in temperature and volumetric liquid water content at 5 and 15 cm depths. One spot is near the alder collar (ALNUS), the other spot is 6 m away, under grass (GRASS).</p> <p>The meteorological data were obtained from the FR-Clt station, 750 m away (45.041278°N, 6.410611°E, 2046 m asl). See (Gupta et al., 2023) for details. Only the data relevant for heat transfer simulations are given.</p> <p>The simulation framework gives the alder mesh used in the heat transfer simulations. Typical simulations use a wood thermal conductivity of 1 W m<sup>-1</sup> K<sup>-1</sup> and a snow thermal conductivity of 0.1 W m<sup>-1</sup> K<sup>-1</sup>. Based on observations, the snow height at Alnus-Nivus is likely to be at least twice the value at FR-Clt. Forcing uses the snow surface temperature, derived from upwelling longwave radiation using an emissivity of 1. The data allow testing thermal bridging through shrub branches. These data are used in a publication in preparation: Domine, Fourteau, Choler, Exploration of Thermal Bridging Through Shrub Branches in Alpine Snow.</p> <p>Reference</p> <p>Gupta, A., Reverdy, A., Cohard, J. M., Hector, B., Descloitres, M., Vandervaere, J. P., Coulaud, C., Biron, R., Liger, L., Maxwell, R., Valay, J. G., and Voisin, D.: Impact of distributed meteorological forcing on simulated snow cover and hydrological fluxes over a mid-elevation alpine micro-scale catchment, Hydrol. Earth Syst. Sci., 27, 191-212, 2023.</p>
Radiation damage hot spots formed by two-step electron transfer mediated decay of solvated ions - data
<p>Data set pertaining to the manuscript "Radiation damage hot spots formed by two-step electron transfer mediated decay of solvated ions", accepted for publication in Nature Chemistry.</p> <p>Files with extension .h5 are hdf5-files structured according to the NeXus standard v2022.07, see<br> https://www.nexusformat.org/<br> https://fairmat-experimental.github.io/nexus-fairmat-proposal/50433d9039b3f33299bab338998acb5335cd8951/mpes-structure.html<br> NeXus data files can be opened with any software capable of opening hdf5-structured files. The following viewers are adapted to the specifics of the NeXus data format:<br> * nexpy (distributed with python)<br> * https://h5web.panosc.eu/h5wasm (web-based NeXus viewer maintained by the European Photon and Neutron Open Science Cloud-consortium)</p> <p>In each NeXus file-entry, two types of spectra are shown:<br> 1. Sweep-averaged spectra, integrated over the non-dispersive coordinate of our detector ('data') if applicable.<br> 2. As-measured data ('raw').</p> <p>Files with extension .csv are comma-separated ascii-files, designed to be opened with a spreadsheet programme.</p> <p><br> The following files are provided:</p> <p>Photoemission data pertaining to ETMD measurements:<br> alcl3-K-etmd.h5 (ETMD after Al K-shell photoionization)<br> alcl3-L23-etmd.h5 (ETMD after Al L-shell photoionization)</p> <p>Calculated energies of the ETMD final states after 1s ionization. The energies were calculated at the CAS-CI/cc-pVDZ level. The states were shifted so that the lowest-energy state corresponds to the LC-ωPBE/aug-cc-pVTZ and aug-cc-pCVTZ value obtained in a polarizable continuum:<br> Dataset_ETMD_after_1s_ionization.csv<br> Dataset_ETMD_after_2p_ionization.csv</p> <p>Geometrical coordinates of the clusters that were used for energy calculation:<br> clusters.dat<br> clusters_small.dat</p> <p>Contact: Uwe Hergenhahn, uhe@fhi.mpg.de .</p> <p> </p> <p>Version history:</p> <p>v3 - Al L2,3 data: Orientation of the analyser hemisphere corrected. Direction of the linear polarization vector added. All other data unchanged.<br> v2 - cluster coordinates added, all other data unchanged.<br> v1 - initial upload.</p>
Full Virginia Girls' Reformatory Transfer and Dismissal Data 1910-1938
<p>Slice created from parent data set:<a href="https://zenodo.org/record/3872019#.XtVXS0GM-Uk"> Full Virginia Girls' Reformatory Admissions Database 1910-1938</a></p> <p>Data set of 2,370 individual female reformatory inmates admitted to the Virginia Home and Industrial School for Girls at Bon Air and the Industrial Home School for Colored Girls at Peake’s Turnout between 1910 and 1938. Created out of the unpublished and archived admissions books of these institutions. Due to Virginia’s 75-year privacy restriction, I stopped collecting at December 1938 for each institution. Data from the Home at Bon Air runs 1910 to 1938; from the Home at Peake’s Turnout from 1915 to 1938. Each reformatory kept separate books, which were archived into separate collections. There was enough similarity between the two books to transcribe the data into one large data set.</p> <p>Reformatory administrators hand wrote basic administrative information about each girl into bound books. For incoming delinquent girls, they recorded: student number, name, birthdate or age at admittance, date of admittance, and committing jurisdiction (by county or city jurisdiction.) The books also recorded the individual’s parole history, including first parole (and up to her third parole on an individual’s performance) and any return dates; administrators recorded the destination of the first parole, but this was inconsistently recorded. The books note when and to whom inmates were married, usually after their official dismissal. Because transferring an inmate officially removed them from the responsibility of the reformatory, administrators recorded transfer information, including where they went and when. Lastly, the books recorded the official dismissal date and reason. Bon Air’s books were more consistent with recording dismissals and neither institution used consistent definitions of “transfer” versus “dismissal.” <br> <br>I manually transcribed these books verbatim into a database. From this core data, I added categories of information to aid my analysis. These include: race, gender, and reformatory; calculations of either age or birthdate (Peake’s recorded birthdates, Bon Air only ages); parole year taken from the first parole date; parole type determined by me based on the parole destination, if recorded. To help me analyze transfer and dismissal information, I determined the “type” and “category” of each transfer or dismissal and added new categories. These allowed me to “rollup” the varieties of recorded data into fewer descriptive types and categories. Because administrators recorded only the institution name or location when girls were transferred and dismissed elsewhere, this allowed me to organize this info into 18 “types”: asylum, colony, court, death, department of public welfare, escape, family, honorable discharge, illegal commitment, maternity, orphanage, other, penal, private, reorganization (only used for Bon Air in 1914), sanitorium/hospital, venereal disease, and wages. These 18 “types” were then further distilled into 9 “categories” to capture the broadest possible categorization of the reasons why girls were transferred or dismissed: administrative, death, escape, mental, penal, physical, private, unknown, and work.</p> <p>I have removed the names of the individual inmates upon publication.<strong> Researchers interested in using this data in their own work can contact me at erin@erinbush.org to request the versions that include full name fields. The Data Dictionary is also available upon request.</strong></p> <p>The contents of these data sets, as government records, I believe fall under fair use.</p> <p><strong>Full Collection</strong></p> <ul> <li>Full Virginia Girls' Reformatory Admissions Database 1910-1938: <a href="https://zenodo.org/records/3872019">https://zenodo.org/records/3872019</a></li> <li>Full Virginia Girls' Reformatory Transfer and Dismissal Data 1910-1938: <a href="https://zenodo.org/records/3872110">https://zenodo.org/records/3872110</a></li> <li>Full Virginia Girls' Reformatory Parole Data 1910-1938: <a href="https://zenodo.org/records/3872100">https://zenodo.org/records/3872100</a></li> </ul>
Radiance data for "Systematic Comparison of Vectorial Spherical Radiative Transfer Models in Limb Scattering Geometry" by Zawada et al.
<p>Radiance data for "Systematic Comparison of Vectorial Spherical Radiative Transfer Models in Limb Scattering Geometry" by Zawada et al. which is to be submitted to Atmospheric Measurement Techniques. </p> <p>A comprehensive inter-comparison of seven radiative transfer models in the limb scattering geometry has been<br> performed. Every model is capable of accounting for polarisation within a fully spherical atmosphere. Three models (GSLS, SASKTRAN-HR, and SCIATRAN) are deterministic, and four models (MYSTIC, SASKTRAN-MC, Siro, and SMART-G)<br> are statistical using the Monte Carlo technique. This dataset consists of the raw radiance data used to perform the intercomparisons, atmospheric input data for the optical properties of the atmosphere, and data specifying the geometry of the test cases.</p> <p>Data is provided in NetCDF4 format with documentation present inside the variable attributes.</p> <p>More detail on the comparison scenarios can be found within the published article. (Link to be added when available).</p>
Data: Steering photoinduced electron transfer in intramolecular photocatalysts by peripheral ligand control
<p>The data presented herein is analysed and showcased within the <i>ChemRxiv</i> article titled "<i>Steering photoinduced electron transfer in intramolecular photocatalysts by peripheral ligand control</i>" (<a href="10.26434/chemrxiv-2023-vspb5"><strong>DOI </strong></a><a href="https://doi.org/10.26434/chemrxiv-2023-vspb5"><strong>10.26434/chemrxiv-2023-vspb5</strong></a>). Kindly acknowledge and cite this article when referencing or utilizing the provided data.</p>
Data and configuration files for "Expansion of accreting main-sequence stars during rapid mass transfer"
<p>Data and configuration files that can be used to reproduce results from the paper <a href="https://ui.adsabs.harvard.edu/abs/2024ApJ...966L...7L/abstract">Expansion of Accreting Main-sequence Stars during Rapid Mass Transfer</a>. This directory contains MESA inlists and starting models used for calculations performed with MESA r15140, and YAML configuration files for calculations performed with COMPAS v02.41.04.</p> <p>See README.txt for a description of all files.</p> <p> </p> <p>Any work making use of these files should cite</p> <p>Lau, M., Hirai, R., Mandel, I., Tout, C., 2024, Expansion of Accreting Main-sequence Stars during Rapid Mass Transfer, ApJL, 966, 1</p> <div></div>
Data related to publication "Coherent phase transfer for real-world twin-field quantum key distribution; Supplementary Information"
<p>These files contains datasets from which the Figures appearing in the Supplementary Information have been calculated. </p> <p>Description of datasets:</p> <p>Datasets related to SupplFig1 contain two columns: Frequency in Hz and phase noise in rad^2/Hz</p> <p>Data_SupplFig1_stabilised_fringes: psd of the phase noise calculated from the interference fringes in a stabilised condition</p> <p>Data_SupplFig1_unstabilised_fringes: psd of the phase noise calculated from the interference fringes in an unstabilised condition</p> <p>Data_SupplFig1_roundtrip_sensing_laser: psd of the sensing laser signal after a round-trip in the interferometer, calculated from self-heterodyne beatnote</p> <p>Data_SupplFig1_differential_roundtrip_sensing_vs_reference_laser: psd of the difference between the round-trip self-heterodyne beatnotes at the sensing and reference laser wavelengths</p> <p>Datasets related to SupplFig2 contain two columns: time in seconds and normalised intensity (calculated as detailed in the main publication).</p> <p>Data_SupplFig2_High_power_PD_free_evol: normalised intensity of the interference signal obtained with classical power level at the source. This trace was recorded with a photodiode when no artificial phase drift was applied</p> <p>Data_SupplFig2_High_power_PD_phase_drift: normalised intensity of the interference signal obtained with classical power level at the source. This trace was recorded with a photodiode when an artificial phase drift was applied (8pi/s)</p> <p>Data_SupplFig2_High_power_SPD_free_evol: normalised intensity of the interference signal obtained with classical power level at the source. This trace was recorded on an SPD (after suitable attenuation) when no artificial phase drift was applied </p> <p>Data_SupplFig2_High_power_SPD_phase_drift: normalised intensity of the interference signal obtained with classical power level at the source. This trace was recorded on an SPD (after suitable attenuation) when an artificial phase drift was applied (8pi/s)</p> <p>Data_SupplFig2_Attenuated_SPD_free_evol: normalised intensity of the interference signal obtained with attenuated beams at the source. This trace was recorded on an SPD when no artificial phase drift was applied </p> <p>Data_SupplFig2_Attenuated_SPD_phase_drift: : normalised intensity of the interference signal obtained with attenuated beams at the source. This trace was recorded on an SPD when an artificial phase drift was applied (8pi/s)</p> <p> </p>
Data for "Hot-carrier transfer across a nanoparticle-molecule junction: The importance of orbital hybridization and level alignment"
<p>This upload includes the data presented and analyzed in the article "Hot-carrier transfer across a nanoparticle-molecule junction: The importance of orbital hybridization and level alignment" by Jakub Fojt, Tuomas P. Rossi, Mikael Kuisma, and Paul Erhart.</p> <p>The codes for reproducing the data are provided at <a href="https://doi.org/10.5281/zenodo.7118376">doi:10.5281/zenodo.7118376</a>.</p> <p>See <em>README.md</em> in <em>data.zip</em> for a detailed description.</p>
Idealized wave data in support of Modulation of Bubble Mediated Gas Transfer due to Wave-Current Interactions
<p>WaveWatchIII data output from idealized solutions reported by Romero 2019</p> <p>Data are in Netcdf format and include metadata.</p> <p>Each file corresponds to a duration-limited solution with constant wind speed as indicated in the filename</p> <p>(e.g. 10mps means 10 m/s winds)</p> <p> </p>
Level 2 Winter data in support of Modulation of Bubble Mediated Gas Transfer due to Wave-Current Interactions
<p>WaveWatchIII data output from solutions of a nested configuration off the coast of California. These data are a subset of the solutions reported by Romero et al. 2020.</p> <p>These data are Level 2 of the nested configuration with a horizontal resolution of 270 m. Also included in this repository are the Level 2 and Level 3 grid files.</p> <p>Data are in Netcdf format including the metadata.</p> <p>The two simulation periods are December 2006 and Spring 2007.</p> <p>List of files:</p> <p>L2_Dec2006.nc -- December control solution only forced by winds</p> <p>L2_cew_Dec2006.nc -- December solution including forcing by both winds and currents.</p> <p>L2_grid.nc -- Level 2 grid</p> <p>L3_grid.nc -- Level 3 grid</p> <p> </p> <p> </p> <p> </p> <p> </p>
Data underpinning "Pulse sequence considerations for interleaved chemical exchange saturation transfer acquisition sequences."
<p>=================================================<br> Robert Casper Brand, PhD Candidate<br> Wellcome Centre for Integrative Neuroimaging, FMRIB Division, Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford, UK.<br> =================================================</p> <p>This folder contains the images and datasets used to generate the figures of the paper named: "Pulse sequence considerations for interleaved chemical exchange saturation transfer acquisition sequences." </p> <p>Each figure of the paper, with its corresponding data, is contained in an opensource TikZ format file. The TikZ files include both information on the axis as well as the supporting data and can be opened with any generic text editor. For more information on TikZ, see:<br> https://www.sharelatex.com/learn/TikZ_package). </p> <p>Where datasets were too large to be run by standard TeX distributions, the data was attached in an alternative format, and a TikZ wrapper included.</p> <p>The figures can be generated through any of the opensource TeX distributions. For more information on LaTeX and TeX, please see: <br> https://www.latex-project.org/get/ and<br> https://www.sharelatex.com/learn/Pgfplots_package.</p> <p>A compilation example of all figures, which also lists any additional packages, is included in the "wrapper. Tex" file. The output of this process was added to this folder as well (wrapper.pdf).</p> <p>The included files were created using directly from Matlab using the matlab2tikz code:<br> https://www.mathworks.com/matlabcentral/fileexchange/22022-matlab2tikz-matlab2tikz</p>
Supplementary phylogenetic data for Manzano-Marín et. al. 2020 "Serial horizontal transfer of vitamin-biosynthetic genes enables the establishment of new nutritional symbionts in aphids' di-symbiotic systems"
<p>Supplementary data for Manzano-Marín et. al. 2019 "Serial horizontal transfer of vitamin-biosynthetic genes enables the establishment of new nutritional symbionts in aphids' di-symbiotic systems".</p> <p>The data set consists of four folders:</p> <p>1) "Buchnera_phylo”: PHYLIP-formatted file used for phylogenetic reconstruction of <em>Buchnera</em> and resulting tree in NEWICK format.</p> <p>2) "Erwinia_phylo”: PHYLIP-formatted file used for phylogenetic reconstruction of <em>Erwinia</em> and resulting tree in NEWICK format.</p> <p>3) "Hamiltonella_phylo”: FASTA-formatted nucleotide alignment files of each gene and NEXUS-formatted files used for Bayesian phylogenetic reconstruction of <em>Hamiltonella</em> symbionts.</p> <p>4) "HGT_genes": FASTA-formatted nucleotide alignment files of each horizontally transferred gene and non-horizontally transferred genes nupC, and <em>gpmA</em>. Also, NEXUS-formatted files used for Bayesian phylogenetic reconstruction and of resulting trees.</p> <p>5) "Tn3_pylo": FASTA-formatted amino acid alignment files of mobile elements related to the Tn3 family resolvase/invertase found in <em>Hamiltonella</em>-associated <em>Erwinia haradaeae</em> symbionts. Also, NEXUS-formatted files used for Bayesian phylogenetic reconstruction and of resulting trees.</p>
Simulation data for "Characteristics of Wave-Particle Power Transfer as a Function of Electron Pitch Angle in Nonlinear Frequency Chirping" which will be submitted to Journal of Geophysical Research: Space Physics
<p>Simulation data for "Characteristics of Wave-Particle Power Transfer as a Function of Electron Pitch Angle in Nonlinear Frequency Chirping" which will be submitted to Journal of Geophysical Research: Space Physics.</p> <p>Including the simulation input parameter file and the necessary output data to plot each figure in the article. </p>
Supplementary Information and EBSD data for 'Intermetallic phase layers in cold metal transfer aluminium-steel welds with an Al-Si-Mn filler alloy'
<p>Supplementary information and electron backscatter diffraction (EBSD) data for the article entitled 'Intermetallic phase layers in cold metal transfer aluminium-steel joints with an Al-Si-Mn filler alloy'. There are three EBSD datasets, I-III, named "I_EBSD.dat" - "III_EBSD.dat", each with corresponding calibration and background patterns, as well as secondary electron scanning electron microscopy images showing the scanned area and text files containing the acquisition parameters. The data analysis workflow has been published on GitHub, see References.</p>
TUK-FFDat - Data scheme and data format for transferable force fields for molecular simulation
<p>Online repository to suplement the following publication:</p> <p>G. Kanagalingam, S. Schmitt, F. Fleckenstein, S. Stephan: Data scheme and data format for transferable force fields for molecular simulation, Scientific Data, accepted (2023).</p>
Data from: Dynamics of diet-egg transfer of fatty acids in the teleost fish, red drum (Sciaenops ocellatus)
<p>Eggs of marine organisms are increasingly being recognized as important components of marine food webs. The degree to which egg fatty acid profiles reflect maternal diet fatty acid profiles, and therefore the value of fatty acids in eggs as trophic biomarkers, depends on the species' reproductive strategy and the extent of modification of ingested fatty acids. We measured the dynamics of transfer of recently ingested fatty acids to spawned eggs in a batch-spawning teleost, red drum (<em>Sciaenops ocellatus</em>). Results of 21 dietshift experiments, from which the fatty acid profiles of the diets and eggs were compared, showed that 15 of 27 fatty acids measured (one saturated, two monounsaturated and 12 polyunsaturated fatty acids) in eggs were correlated with their levels in the recent diet, and the rate of incorporation into eggs was proportional to the magnitude of the diet shift. Large shifts in diet might occur naturally during spawningmigrations or when prey communities vary over time. Results of this study indicate that fatty acids in red drum eggs can be useful for studying adult diet and exploring trophic linkages in marine systems.</p> <p>This article is part of the theme issue 'The next horizons for lipids as 'trophic biomarkers': evidence and significance of consumer modification of dietary fatty acids'.</p>
Spatial Span and Matrix Reasoning data from the UW-Madison Learning and Transfer Lab
<p><strong>Matrices_SpatialSpan.csv</strong> includes one row for every mouse click for every trial for each participant's spatial span performance (for similar spatial span methods see Cochrane, Simmering, & Green, 2019, PLOS One). Participant IDs, trial numbers, the presence [f] or absence [n] of feedback, and task order (spatial span first or spatial span second) are included alongside by-click accuracy. Also included are each participants' average scores on a subset of items from the UCMRT (Pahor et al., 2019, Beh. Res. Meth) and from the matrices developed at Sandia National Laboratories (Matzen et al., 2010, Beh. Res. Meth.).</p> <p><strong>robustCor.R </strong>is R code implementing a test of bivariate correlation. Univariate Yeo-Johnson transformations are applied, then bootstrapped correlations coefficients are calculated. Point estimates, CI, and Bayes Factors are each returned.</p> <p>Data were collected and code was developed as part of A. Cochrane's dissertation work at the University of Wisconsin - Madison under the supervision of C. Shawn Green.</p>
Data and code used in analyses for Simulated soundscapes and transfer learning boost the performance of acoustic classifiers under data scarcity
<p>Evaluation datasets, Python scripts, and computation environments used to conduct analyses for Simulated soundscapes and transfer learning boost the performance of acoustic classifiers under data scarcity. <br><br>transfer_learning_project.zip also contains a vignette describing the use of a generalized script for adapting these methods to novel acoustic classification tasks. </p> <p> </p>
Data and code for publication: Advancing Maternal Transfer of Organic Pollutants across Reptiles for Conservation and Risk Assessment Purposes
<p>Dataset and r code to prepare the dataset, in support of the publication:</p> <p>"Advancing maternal transfer of organic pollutants across reptiles for conservation and risk assessment purposes"</p> <p>Munoz, C.C., Charles, S., Vermeiren, P. (2024) Environmental Science and Technology, https://doi.org/10.1021/acs.est.4c04668</p> <p>contact email: munozc.cynthia@gmail.com</p>
Data for plots in Restoring Adiabatic State Transfer in Time-Modulated Non-Hermitian Systems
<p><span>Data for plots in Restoring Adiabatic State Transfer in Time-Modulated Non-Hermitian Systems (Physical Review Letters 133, 113802 (2024).</span></p> <p><span>The dataset files contain data and python code for plotting panels (c)-(f) of the Fig.4 in the article.</span></p> <p> </p>
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.