← Capabilities

Pose Estimation

Keypoint-level tracking of body parts across species and paradigms

Go beyond center-of-mass — track head direction, paw placement, tail position, and body orientation frame by frame.

Pose Estimation
7+
Keypoints tracked
Multi
Species supported
Frame-byframe
Temporal resolution
SuperAnimal
Pretrained model library
The problem

Center-of-mass tracking discards body-part-level information

A single centroid coordinate cannot represent the complexity of rodent posture and movement. Head direction is lost, making it impossible to determine what the animal is investigating. Paw placement is invisible, preventing gait quantification from standard video. Postural changes — hunching, stretching, twisting — are collapsed into a single point.

  • Head direction is unknown — approach toward a stimulus cannot be distinguished from backing away
  • Paw placement and limb extension are invisible to centroid tracking, precluding gait-level analysis
  • Postural state — hunched, stretched, curled — carries behavioral meaning that a single coordinate discards
The solution

Multi-keypoint pose estimation with pretrained and custom models

ConductVision tracks 7+ body keypoints — head, body center, tail base, and four paws — using SuperAnimal pretrained models. Custom keypoint configurations can be trained for specialized preparations. All keypoint coordinates are exported per frame for downstream analysis.

  • Seven or more keypoints tracked simultaneously — head, body, tail, and all four paws
  • SuperAnimal pretrained models provide immediate deployment across standard rodent species
  • Custom models trainable for non-standard species or specialized keypoint configurations
Endpoints

Body-part-level dependent variables

Per-keypoint coordinates

Per-keypoint coordinates

X/Y position and confidence score for each keypoint — head, body center, tail base, and four paws — at every frame. Enables post-hoc computation of any body-part-derived measure.

CSVJSON
Body orientation and limb extension metrics

Body orientation and limb extension metrics

Head-body angle, body axis orientation, limb extension, and tail curvature computed from keypoint geometry. Pre-computed for common analyses.

CSV
Posture classification per frame

Posture classification per frame

Discrete posture labels — rearing, grooming, hunched, stretched attend — assigned per frame from keypoint configurations.

CSV
Applications

Paradigms requiring body-part-level resolution

Spatial decision-making

Head direction in maze choice points

Track where the animal is looking, not just where its body center is located. Head direction at T-maze or Y-maze choice points reveals vicarious trial-and-error and decision dynamics.

Measures
  • Head direction at choice point
  • Head scan frequency
  • Gaze-movement coupling
Locomotor analysis

Paw placement in gait studies

Track individual paw positions frame by frame for stride length, stance width, and step sequence analysis from standard overhead or side video.

Measures
  • Stride length per paw
  • Stance width
  • Step sequence regularity
Neurological assessment

Postural assessment in neurological models

Quantify postural abnormalities — asymmetric limb extension, tail deflection, body axis curvature — in stroke, TBI, or neurodegenerative models.

Measures
  • Limb extension asymmetry
  • Tail deflection angle
  • Body axis curvature
Orientation behavior

Body axis orientation and turning behavior

Compute heading direction, turning rate, and angular velocity from body axis orientation. Detect ipsiversive and contraversive turning in unilateral lesion models.

Measures
  • Heading direction
  • Turn rate
  • Ipsiversive/contraversive ratio
Compared to typical systems

How ConductVision differs

FeatureConductVisionTypical systems
Tracking resolution7+ keypoints per animalSingle centroid
Species coverageMouse, rat, and custom speciesSpecies-specific licenses
Pretrained model availabilitySuperAnimal models includedRequires manual annotation and training
Custom keypoint trainingSupported — GUI-based annotationLimited or not available
Head direction outputComputed from head-body axisNot available from centroid

Track what center-of-mass tracking misses

See head direction, paw placement, and postural dynamics extracted from your existing video.