Home Cage Monitoring

Overview

Home cage monitoring provides continuous, undisturbed observation of rodent behavior in the home environment using overhead video, side-view cameras, or multi-sensor arrays. Unlike traditional behavioral tests that measure responses in novel, experimenter-controlled environments, home cage monitoring captures the full repertoire of spontaneous behavior — locomotion, rearing, grooming, nesting, sleeping, feeding, drinking, and social interactions — in the environment where the animal spends its entire life.

This approach eliminates acute stress artifacts from handling, novel environment exposure, and transport that confound conventional testing. It is particularly valuable for detecting subtle behavioral changes that occur over hours or days, such as progressive motor decline in neurodegenerative models, sickness behavior following immune challenge, pain-related behavioral suppression, or circadian fragmentation. Machine learning-based pose estimation (DeepLabCut, SLEAP) and behavior classification now enable automated scoring of complex behavioral repertoires from home cage video.

ConductMaze integrates with overhead and side-view camera systems, IR illumination for dark-phase recording, and sensor arrays (food/water access, nest quality scoring) to provide continuous multimodal home cage data. The software performs automated behavior classification, generates ethograms, computes activity budgets (percentage of time in each behavioral state), and identifies behavioral transitions and bout structures.

Trial Flow

start

Install Cameras

Mount cameras and IR illumination above home cage

process

Acclimation

Allow 24h habituation to camera/sensor presence

process

Continuous Recording

Video and sensor data collected 24/7

output

Behavior Detection

ML classifiers identify behavioral states in real time

process

Bout Analysis

Segment continuous stream into behavioral bouts

output

Activity Budget

Compute time allocation across behavioral categories

end

Report Generation

Daily/weekly behavioral summaries and trend analysis

Parameters

ParameterTypeDefaultDescription
Recording Durationdays7Total monitoring period
Video Resolutionenum1080pCamera resolution (720p, 1080p, 4K)
Frame Ratefps30Video acquisition frame rate
IR IlluminationbooleanYesInfrared lighting for dark-phase recording
Behavior Categoriesinteger8Number of classified behavioral states
Housing TypeenumSingleSingle or group housed (affects tracking complexity)
Nest MonitoringbooleanYesInclude nest quality scoring via image analysis

Metrics

MetricUnitDescription
Distance Traveledcm/hHourly locomotion in home cage — general activity
Rearing Frequencyevents/hNumber of vertical explorations per hour
Grooming Durationmin/hTime spent grooming — stress or dermatological index
Sleep Durationhours/dayTotal immobility meeting sleep criteria per day
Nest Score0-5 scaleDaily nest quality rating — well-being and thermoregulation
Activity Budget%Percentage of time in each behavioral state
Behavioral EntropybitsComplexity of behavioral sequence — stereotypy detection
Dark/Light ActivityratioActivity ratio between dark and light phase

Sample Data

SubjectGroupDayDistance_cm_hRearing_hGrooming_min_hSleep_h_dayNest_Score

Representative data for illustration purposes. Actual values will vary by species, strain, and experimental conditions.

Applications

  • 1
    Neurodegenerative diseaselongitudinal behavior decline tracking in ALS, AD, HD models without handling stress
  • 2
    Pain researchspontaneous pain behavior and activity suppression as non-evoked pain endpoints
  • 3
    Sickness behaviorimmune challenge effects on activity, grooming, nesting, and social behavior
  • 4
    Drug safetycontinuous behavioral monitoring for adverse CNS effects over days
  • 5
    Animal welfareautomated welfare scoring (nest quality, activity, grooming) for 3Rs compliance

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