Experimental Confounds
Experimental confound

Circadian phase

Circadian phase affects physiology, movement, arousal, and task engagement, so test timing should be planned and reported.

Decision summary

Control circadian phase when endpoints depend on activity, sleep, metabolism, arousal, or learning. Report time of day relative to the light cycle, not only the clock time.

Timing variableZeitgeber time or time relative to lights on/off.
Affected endpointsDistance, latency, preference, feeding, sleep, and physiological readouts.
Control actionBalance groups across time blocks or keep testing windows fixed.
Audit fieldRoom light cycle, session time, and order by group.

Use when

  • Testing happens across different times of day or across multiple rooms.
  • The endpoint depends on activity, exploration, feeding, sleep, or arousal.
  • The study compares cohorts tested on different schedules.

Do not use when

  • Groups were tested in different light-cycle windows without balancing.
  • The light cycle or testing time is missing from the method record.
Caveats
  • Clock time alone is insufficient when rooms have different light schedules.
  • Testing order can confound group with circadian phase.
  • Phase effects can interact with lighting, feeding, and handling.
Reporting checklist
  • Report light/dark cycle and testing window.
  • State time relative to lights on or lights off.
  • Report whether groups were balanced across time blocks.
  • Report deviations from the planned testing window.
  • State whether acclimation matched the testing schedule.

Related surfaces

Use these related surfaces to move from the scientific method question to the relevant product page, endpoint definition, analysis tool, or adjacent guide.